Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_O06
(475 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical pr... 71 6e-13
Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical pr... 71 6e-13
Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical pr... 71 6e-13
U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein. 71 6e-13
U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein. 71 6e-13
Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z32682-9|CAA83616.1| 319|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z30317-7|CAA82973.1| 319|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 2.3
U42830-5|AAC48280.2| 437|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z66512-4|CAA91326.1| 329|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z95623-3|CAB09135.1| 327|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z49913-7|CAA90149.1| 327|Caenorhabditis elegans Hypothetical pr... 27 9.1
U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclas... 27 9.1
AF040655-9|AAB95038.1| 288|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical
protein F58A3.1c protein.
Length = 629
Score = 70.5 bits (165), Expect = 6e-13
Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 45/170 (26%)
Frame = +1
Query: 13 STLNYLRLCVILEPMQELMSRHK-AYALSPRDCLKTTLFQKWQ-------------RMVA 150
ST N + + IL+PMQ +MS K A A++PR+ +K TLFQ Q +M+
Sbjct: 282 STFNLMTMLKILDPMQSIMSSAKSAPAITPREVMKRTLFQHHQVRQQNMRQQQLNQQMMI 341
Query: 151 P---PESQRPASKRRKR---------KGSXXXXXXXXXXT---------------KKRSP 249
P PE +PA KR+++ K + T ++ P
Sbjct: 342 PAPEPEKPKPARKRQRKPAANPRGSKKATAAAAAAAAAATNGVPPTVPTASPANNQQFPP 401
Query: 250 GPNFSLASQ----DVMVVGEPSLMGGEFGDEDERLITRLENTQYEGDGVE 387
P S Q DVMVVGEPS+MG EFG+ DER I+R+EN+QY+ + ++
Sbjct: 402 NPMTSQFQQMSYPDVMVVGEPSMMGSEFGENDERTISRVENSQYDPNAMQ 451
>Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical
protein F58A3.1b protein.
Length = 578
Score = 70.5 bits (165), Expect = 6e-13
Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 45/170 (26%)
Frame = +1
Query: 13 STLNYLRLCVILEPMQELMSRHK-AYALSPRDCLKTTLFQKWQ-------------RMVA 150
ST N + + IL+PMQ +MS K A A++PR+ +K TLFQ Q +M+
Sbjct: 231 STFNLMTMLKILDPMQSIMSSAKSAPAITPREVMKRTLFQHHQVRQQNMRQQQLNQQMMI 290
Query: 151 P---PESQRPASKRRKR---------KGSXXXXXXXXXXT---------------KKRSP 249
P PE +PA KR+++ K + T ++ P
Sbjct: 291 PAPEPEKPKPARKRQRKPAANPRGSKKATAAAAAAAAAATNGVPPTVPTASPANNQQFPP 350
Query: 250 GPNFSLASQ----DVMVVGEPSLMGGEFGDEDERLITRLENTQYEGDGVE 387
P S Q DVMVVGEPS+MG EFG+ DER I+R+EN+QY+ + ++
Sbjct: 351 NPMTSQFQQMSYPDVMVVGEPSMMGSEFGENDERTISRVENSQYDPNAMQ 400
>Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical
protein F58A3.1a protein.
Length = 592
Score = 70.5 bits (165), Expect = 6e-13
Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 45/170 (26%)
Frame = +1
Query: 13 STLNYLRLCVILEPMQELMSRHK-AYALSPRDCLKTTLFQKWQ-------------RMVA 150
ST N + + IL+PMQ +MS K A A++PR+ +K TLFQ Q +M+
Sbjct: 245 STFNLMTMLKILDPMQSIMSSAKSAPAITPREVMKRTLFQHHQVRQQNMRQQQLNQQMMI 304
Query: 151 P---PESQRPASKRRKR---------KGSXXXXXXXXXXT---------------KKRSP 249
P PE +PA KR+++ K + T ++ P
Sbjct: 305 PAPEPEKPKPARKRQRKPAANPRGSKKATAAAAAAAAAATNGVPPTVPTASPANNQQFPP 364
Query: 250 GPNFSLASQ----DVMVVGEPSLMGGEFGDEDERLITRLENTQYEGDGVE 387
P S Q DVMVVGEPS+MG EFG+ DER I+R+EN+QY+ + ++
Sbjct: 365 NPMTSQFQQMSYPDVMVVGEPSMMGSEFGENDERTISRVENSQYDPNAMQ 414
>U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein.
Length = 579
Score = 70.5 bits (165), Expect = 6e-13
Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 45/170 (26%)
Frame = +1
Query: 13 STLNYLRLCVILEPMQELMSRHK-AYALSPRDCLKTTLFQKWQ-------------RMVA 150
ST N + + IL+PMQ +MS K A A++PR+ +K TLFQ Q +M+
Sbjct: 232 STFNLMTMLKILDPMQSIMSSAKSAPAITPREVMKRTLFQHHQVRQQNMRQQQLNQQMMI 291
Query: 151 P---PESQRPASKRRKR---------KGSXXXXXXXXXXT---------------KKRSP 249
P PE +PA KR+++ K + T ++ P
Sbjct: 292 PAPEPEKPKPARKRQRKPAANPRGSKKATAAAAAAAAAATNGVPPTVPTASPANNQQFPP 351
Query: 250 GPNFSLASQ----DVMVVGEPSLMGGEFGDEDERLITRLENTQYEGDGVE 387
P S Q DVMVVGEPS+MG EFG+ DER I+R+EN+QY+ + ++
Sbjct: 352 NPMTSQFQQMSYPDVMVVGEPSMMGSEFGENDERTISRVENSQYDPNAMQ 401
>U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein.
Length = 592
Score = 70.5 bits (165), Expect = 6e-13
Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 45/170 (26%)
Frame = +1
Query: 13 STLNYLRLCVILEPMQELMSRHK-AYALSPRDCLKTTLFQKWQ-------------RMVA 150
ST N + + IL+PMQ +MS K A A++PR+ +K TLFQ Q +M+
Sbjct: 245 STFNLMTMLKILDPMQSIMSSAKSAPAITPREVMKRTLFQHHQVRQQNMRQQQLNQQMMI 304
Query: 151 P---PESQRPASKRRKR---------KGSXXXXXXXXXXT---------------KKRSP 249
P PE +PA KR+++ K + T ++ P
Sbjct: 305 PAPEPEKPKPARKRQRKPAANPRGSKKATAAAAAAAAAATNGVPPTVPTASPANNQQFPP 364
Query: 250 GPNFSLASQ----DVMVVGEPSLMGGEFGDEDERLITRLENTQYEGDGVE 387
P S Q DVMVVGEPS+MG EFG+ DER I+R+EN+QY+ + ++
Sbjct: 365 NPMTSQFQQMSYPDVMVVGEPSMMGSEFGENDERTISRVENSQYDPNAMQ 414
>Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical
protein R03D7.8 protein.
Length = 596
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 390 PLDSVALVLGVLEPGDQ-SLVFIAEFAAHQRRFPHYHHVLRGETEVGSWR 244
P + + + G+L+ G+ S+ +A + + RFP + +LRGE E +R
Sbjct: 384 PHNRILFLGGILDSGESGSVECLALICSLKCRFPKHVFILRGEPETSPFR 433
>Z32682-9|CAA83616.1| 319|Caenorhabditis elegans Hypothetical
protein T16G12.7 protein.
Length = 319
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 390 PLDSVALVLGVLEPGDQSLVFIAEFAAHQRRFPHYHHVLRGETEVGS 250
PL + + ++ G QSL F A++ +FP +LRG E GS
Sbjct: 93 PLVNYLFLGDYVDRGQQSLEVACLFLAYKVKFPGNFFMLRGNHECGS 139
>Z30317-7|CAA82973.1| 319|Caenorhabditis elegans Hypothetical
protein T16G12.7 protein.
Length = 319
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 390 PLDSVALVLGVLEPGDQSLVFIAEFAAHQRRFPHYHHVLRGETEVGS 250
PL + + ++ G QSL F A++ +FP +LRG E GS
Sbjct: 93 PLVNYLFLGDYVDRGQQSLEVACLFLAYKVKFPGNFFMLRGNHECGS 139
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +1
Query: 103 DCLKTTLFQKWQRMVAPPESQRPASKRRKRKGSXXXXXXXXXXTKKRSPGPNFSLASQDV 282
DCL + +Q++ A ++R A RRK+ K+ PN +++ Q+
Sbjct: 623 DCLNNVEYAVFQKVYADKRTKREAVFRRKKCSRCGVSGLTPHRVKRNFGQPNINVSEQNC 682
Query: 283 M 285
M
Sbjct: 683 M 683
>U42830-5|AAC48280.2| 437|Caenorhabditis elegans Hypothetical
protein C53B7.7 protein.
Length = 437
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 297 FPHYHHVLRGETEVGSWRAFLSGRGGSRVRPRAAFTF 187
FP+Y+H T G+WRA G G+RV TF
Sbjct: 249 FPNYYH-----TTYGNWRASKLGYTGTRVGHEIGHTF 280
>Z66512-4|CAA91326.1| 329|Caenorhabditis elegans Hypothetical
protein F52H3.6 protein.
Length = 329
Score = 27.1 bits (57), Expect = 6.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 390 PLDSVALVLG-VLEPGDQSLVFIAEFAAHQRRFPHYHHVLRGETEVGS 250
P D L LG ++ G Q L I A++ R+P+ +LRG E S
Sbjct: 78 PPDQNYLFLGDYVDRGRQQLEVICLLMAYKIRYPNRFFILRGNHECAS 125
>Z95623-3|CAB09135.1| 327|Caenorhabditis elegans Hypothetical
protein ZK938.1 protein.
Length = 327
Score = 26.6 bits (56), Expect = 9.1
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 390 PLDSVALVLG-VLEPGDQSLVFIAEFAAHQRRFPHYHHVLRGETEVGS 250
P D L LG ++ G Q L I A++ R+P+ +LRG E S
Sbjct: 78 PPDQNYLFLGDYVDRGRQQLEVICLLMAYKVRYPNGFFILRGNHECAS 125
>Z49913-7|CAA90149.1| 327|Caenorhabditis elegans Hypothetical
protein ZK938.1 protein.
Length = 327
Score = 26.6 bits (56), Expect = 9.1
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 390 PLDSVALVLG-VLEPGDQSLVFIAEFAAHQRRFPHYHHVLRGETEVGS 250
P D L LG ++ G Q L I A++ R+P+ +LRG E S
Sbjct: 78 PPDQNYLFLGDYVDRGRQQLEVICLLMAYKVRYPNGFFILRGNHECAS 125
>U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclase
protein 11 protein.
Length = 1032
Score = 26.6 bits (56), Expect = 9.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 327 IAEFAAHQRRFPHYHHVL 274
+A AHQ +FPH H++
Sbjct: 1007 LARLVAHQEKFPHLEHLI 1024
>AF040655-9|AAB95038.1| 288|Caenorhabditis elegans Hypothetical
protein T24E12.3 protein.
Length = 288
Score = 26.6 bits (56), Expect = 9.1
Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 2/94 (2%)
Frame = +1
Query: 91 LSPRDCLKTTLFQKWQRMVAPPESQRPASKRRKRKGSXXXXXXXXXXTKKRSP--GPNFS 264
LSP + + + P + + RKRK T+KRSP P+F
Sbjct: 150 LSPAYTEASAISGAYSETARLPTTSTTIKRSRKRKDPRKIVPDSIVKTQKRSPRKAPSFD 209
Query: 265 LASQDVMVVGEPSLMGGEFGDEDERLITRLENTQ 366
+ + + G FG E L L N +
Sbjct: 210 VCGMSSSKIFDLWCAGQGFGSMQETLQKFLNNQE 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,550,753
Number of Sequences: 27780
Number of extensions: 174698
Number of successful extensions: 562
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -