BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_O03
(293 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113489-1|AAM29494.1| 427|Drosophila melanogaster RE47112p pro... 29 0.76
AE014134-1777|AAF52871.2| 413|Drosophila melanogaster CG5731-PA... 29 0.76
>AY113489-1|AAM29494.1| 427|Drosophila melanogaster RE47112p
protein.
Length = 427
Score = 29.5 bits (63), Expect = 0.76
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 260 FENWIKDYLKLISCYLILYSRIYGHNSSVHMLFS 159
F +W DY+KL CY + Y +G+++ +L S
Sbjct: 145 FADWNVDYVKLDGCYALPYDMDHGYSTFGRLLNS 178
>AE014134-1777|AAF52871.2| 413|Drosophila melanogaster CG5731-PA
protein.
Length = 413
Score = 29.5 bits (63), Expect = 0.76
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 260 FENWIKDYLKLISCYLILYSRIYGHNSSVHMLFS 159
F +W DY+KL CY + Y +G+++ +L S
Sbjct: 145 FADWNVDYVKLDGCYALPYDMDHGYSTFGRLLNS 178
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,293,178
Number of Sequences: 53049
Number of extensions: 169591
Number of successful extensions: 270
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 506778984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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