Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_N21
(540 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 27 0.12
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 27 0.16
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.37
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 4.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 4.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 4.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 4.6
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 6.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.1
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 27.1 bits (57), Expect = 0.12
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 206 LLIRRNTFFVLNFSFYIFNC 147
LLIR +F +LNF+ FNC
Sbjct: 137 LLIRFKSFSLLNFNLLFFNC 156
Score = 23.0 bits (47), Expect = 2.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 434 LLIGRNAFFVLNFSFDIFNC 375
LLI +F +LNF+ FNC
Sbjct: 137 LLIRFKSFSLLNFNLLFFNC 156
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 26.6 bits (56), Expect = 0.16
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 141 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 251
+DT+ K KI K I PD + L+ KQ E G TL
Sbjct: 732 TDTVLAYKPKILGKPTISPDSRHLVTLDKQ-ETGVTL 767
Score = 26.6 bits (56), Expect = 0.16
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 369 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 479
+DT+ K KI K I PD + L+ KQ E G TL
Sbjct: 732 TDTVLAYKPKILGKPTISPDSRHLVTLDKQ-ETGVTL 767
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.37
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 457 NSKTVALFLTTTFKRNPHFTWSYVC 531
N +ALF T K+N T+ Y+C
Sbjct: 599 NLPKLALFATKDIKQNEEITFDYMC 623
Score = 24.6 bits (51), Expect = 0.65
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 13 VALFLTTTFKRNPHFTWSYVC 75
+ALF T K+N T+ Y+C
Sbjct: 603 LALFATKDIKQNEEITFDYMC 623
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 224 QTTRRRSHSFRLQHSKRIHTSSGLTSARWYADFRQNFNWQNYH 352
+ +R R+ R + K I ++ L++ Y + N+N NY+
Sbjct: 65 ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 224 QTTRRRSHSFRLQHSKRIHTSSGLTSARWYADFRQNFNWQNYH 352
+ +R R+ R + K I ++ L++ Y + N+N NY+
Sbjct: 65 ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 224 QTTRRRSHSFRLQHSKRIHTSSGLTSARWYADFRQNFNWQNYH 352
+ +R R+ R + K I ++ L++ Y + N+N NY+
Sbjct: 65 ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 224 QTTRRRSHSFRLQHSKRIHTSSGLTSARWYADFRQNFNWQNYH 352
+ +R R+ R + K I ++ L++ Y + N+N NY+
Sbjct: 65 ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 224 QTTRRRSHSFRLQHSKRIHTSSGLTSARWYADFRQNFNWQNYH 352
+ +R R+ R + K I ++ L++ Y + N+N NY+
Sbjct: 65 ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 224 QTTRRRSHSFRLQHSKRIHTSSGLTSARWYADFRQNFNWQNYH 352
+ +R R+ R + K I ++ L++ Y + N+N NY+
Sbjct: 65 ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 224 QTTRRRSHSFRLQHSKRIHTSSGLTSARWYADFRQNFNWQNYH 352
+ +R R+ R + K I ++ L++ Y + N+N NY+
Sbjct: 65 ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 224 QTTRRRSHSFRLQHSKRIHTSSGLTSARWYADFRQNFNWQNYH 352
+ +R R+ R + K I ++ L++ Y + N+N NY+
Sbjct: 65 ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 224 QTTRRRSHSFRLQHSKRIHTSSGLTSARWYADFRQNFNWQNYH 352
+ +R R+ R + K I ++ L++ Y + N+N NY+
Sbjct: 298 ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 340
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 224 QTTRRRSHSFRLQHSKRIHTSSGLTSARWYADFRQNFNWQNYH 352
+ +R R+ R + K I ++ L++ Y + N+N NY+
Sbjct: 298 ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 340
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 534 RADVRPGEVWIPFECCSQKECDRLR 460
R D+ G+VW+ F C Q+ D R
Sbjct: 994 RPDLEYGKVWL-FFGCRQRNLDLYR 1017
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.1
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 224 QTTRRRSHSFRLQHSKRIHTSSGLTSARWYADFRQNFNWQNYH 352
+ +R R+ R + K I ++ L++ Y + N+N NY+
Sbjct: 65 ERSRNRTERERSKEPKIISNNNPLSNNYNYNNNYNNYNKHNYN 107
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,538
Number of Sequences: 438
Number of extensions: 2336
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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