Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_N20
(380 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22760-1|AAA99220.1| 150|Homo sapiens cytochrome c oxidase subu... 87 1e-17
CR407649-1|CAG28577.1| 150|Homo sapiens COX5A protein. 87 1e-17
BC024240-1|AAH24240.1| 150|Homo sapiens cytochrome c oxidase su... 87 1e-17
L24521-1|AAA36776.1| 368|Homo sapiens transformation-related pr... 33 0.23
BC052803-1|AAH52803.1| 678|Homo sapiens forkhead box P4 protein. 29 3.8
BC040962-1|AAH40962.1| 667|Homo sapiens forkhead box P4 protein. 29 3.8
BC034931-1|AAH34931.1| 295|Homo sapiens FOXP4 protein protein. 29 3.8
BC016874-1|AAH16874.1| 383|Homo sapiens FOXP4 protein protein. 29 3.8
AL139331-4|CAH72542.1| 678|Homo sapiens forkhead box P4 protein. 29 3.8
AL139331-3|CAH72540.1| 680|Homo sapiens forkhead box P4 protein. 29 3.8
AL139331-2|CAH72541.1| 667|Homo sapiens forkhead box P4 protein. 29 3.8
AB080747-1|BAC53809.1| 680|Homo sapiens fork head-related prote... 29 3.8
BC110818-1|AAI10819.1| 646|Homo sapiens CHD7 protein protein. 29 6.6
BC080627-1|AAH80627.1| 628|Homo sapiens CHD7 protein protein. 29 6.6
BC068000-1|AAH68000.1| 594|Homo sapiens CHD7 protein protein. 29 6.6
BC053890-1|AAH53890.1| 594|Homo sapiens CHD7 protein protein. 29 6.6
BC014681-1|AAH14681.1| 637|Homo sapiens Unknown (protein for IM... 29 6.6
AK123158-1|BAC85544.1| 572|Homo sapiens protein ( Homo sapiens ... 29 6.6
AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein. 29 6.6
AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein. 29 6.6
D86984-1|BAA13220.2| 823|Homo sapiens KIAA0231 protein protein. 28 8.7
BC060782-1|AAH60782.1| 803|Homo sapiens LRRC8B protein protein. 28 8.7
BC030607-1|AAH30607.1| 803|Homo sapiens leucine rich repeat con... 28 8.7
AY358112-1|AAQ88479.1| 802|Homo sapiens ITLT6413 protein. 28 8.7
AF385436-1|AAM43837.1| 803|Homo sapiens T-cell activation leuci... 28 8.7
>M22760-1|AAA99220.1| 150|Homo sapiens cytochrome c oxidase subunit
Va protein.
Length = 150
Score = 87.4 bits (207), Expect = 1e-17
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +3
Query: 201 GPVESDEEFDSRYEAFFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKSALHACRRVNDYA 380
G E+DEEFD+R+ +FN+ DID WE+RKG+N L D+VP+PKII +AL ACRR+ND+A
Sbjct: 44 GSQETDEEFDARWVTYFNKPDIDAWELRKGINTLVTYDMVPEPKIIDAALRACRRLNDFA 103
>CR407649-1|CAG28577.1| 150|Homo sapiens COX5A protein.
Length = 150
Score = 87.4 bits (207), Expect = 1e-17
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +3
Query: 201 GPVESDEEFDSRYEAFFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKSALHACRRVNDYA 380
G E+DEEFD+R+ +FN+ DID WE+RKG+N L D+VP+PKII +AL ACRR+ND+A
Sbjct: 44 GSQETDEEFDARWVTYFNKPDIDAWELRKGINTLVTYDMVPEPKIIDAALRACRRLNDFA 103
>BC024240-1|AAH24240.1| 150|Homo sapiens cytochrome c oxidase
subunit Va protein.
Length = 150
Score = 87.4 bits (207), Expect = 1e-17
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +3
Query: 201 GPVESDEEFDSRYEAFFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKSALHACRRVNDYA 380
G E+DEEFD+R+ +FN+ DID WE+RKG+N L D+VP+PKII +AL ACRR+ND+A
Sbjct: 44 GSQETDEEFDARWVTYFNKPDIDAWELRKGINTLVTYDMVPEPKIIDAALRACRRLNDFA 103
>L24521-1|AAA36776.1| 368|Homo sapiens transformation-related
protein protein.
Length = 368
Score = 33.5 bits (73), Expect = 0.23
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = -1
Query: 263 VFSVEEGFISAIEFFIRLDWAAVSPSYRNYSAYPRCWDQR 144
VFSVE GF A + + L ++V P+ SA+P+CWD R
Sbjct: 52 VFSVETGFHRAGQAGLELLTSSVPPT----SAFPKCWDYR 87
>BC052803-1|AAH52803.1| 678|Homo sapiens forkhead box P4 protein.
Length = 678
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 165 PSLLGPKTFSGHGPMHQKPTSAFCSNVSQELWQ 67
P LG + G GP ++ + FCS +S EL Q
Sbjct: 422 PPGLGSASLHGGGPARRRSSDKFCSPISSELAQ 454
>BC040962-1|AAH40962.1| 667|Homo sapiens forkhead box P4 protein.
Length = 667
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 165 PSLLGPKTFSGHGPMHQKPTSAFCSNVSQELWQ 67
P LG + G GP ++ + FCS +S EL Q
Sbjct: 411 PPGLGSASLHGGGPARRRSSDKFCSPISSELAQ 443
>BC034931-1|AAH34931.1| 295|Homo sapiens FOXP4 protein protein.
Length = 295
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 165 PSLLGPKTFSGHGPMHQKPTSAFCSNVSQELWQ 67
P LG + G GP ++ + FCS +S EL Q
Sbjct: 39 PPGLGSASLHGGGPARRRSSDKFCSPISSELAQ 71
>BC016874-1|AAH16874.1| 383|Homo sapiens FOXP4 protein protein.
Length = 383
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 165 PSLLGPKTFSGHGPMHQKPTSAFCSNVSQELWQ 67
P LG + G GP ++ + FCS +S EL Q
Sbjct: 156 PPGLGSASLHGGGPARRRSSDKFCSPISSELAQ 188
>AL139331-4|CAH72542.1| 678|Homo sapiens forkhead box P4 protein.
Length = 678
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 165 PSLLGPKTFSGHGPMHQKPTSAFCSNVSQELWQ 67
P LG + G GP ++ + FCS +S EL Q
Sbjct: 422 PPGLGSASLHGGGPARRRSSDKFCSPISSELAQ 454
>AL139331-3|CAH72540.1| 680|Homo sapiens forkhead box P4 protein.
Length = 680
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 165 PSLLGPKTFSGHGPMHQKPTSAFCSNVSQELWQ 67
P LG + G GP ++ + FCS +S EL Q
Sbjct: 424 PPGLGSASLHGGGPARRRSSDKFCSPISSELAQ 456
>AL139331-2|CAH72541.1| 667|Homo sapiens forkhead box P4 protein.
Length = 667
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 165 PSLLGPKTFSGHGPMHQKPTSAFCSNVSQELWQ 67
P LG + G GP ++ + FCS +S EL Q
Sbjct: 411 PPGLGSASLHGGGPARRRSSDKFCSPISSELAQ 443
>AB080747-1|BAC53809.1| 680|Homo sapiens fork head-related protein
like A protein.
Length = 680
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 165 PSLLGPKTFSGHGPMHQKPTSAFCSNVSQELWQ 67
P LG + G GP ++ + FCS +S EL Q
Sbjct: 424 PPGLGSASLHGGGPARRRSSDKFCSPISSELAQ 456
>BC110818-1|AAI10819.1| 646|Homo sapiens CHD7 protein protein.
Length = 646
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 207 LGRRVPFLQKLQRLPSLLGPKTFSGHGPMHQKP 109
L P Q + R P+ +G + SG G MHQ+P
Sbjct: 334 LTNNTPMNQSVPRYPNAVGFPSNSGQGLMHQQP 366
>BC080627-1|AAH80627.1| 628|Homo sapiens CHD7 protein protein.
Length = 628
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 207 LGRRVPFLQKLQRLPSLLGPKTFSGHGPMHQKP 109
L P Q + R P+ +G + SG G MHQ+P
Sbjct: 358 LTNNTPMNQSVPRYPNAVGFPSNSGQGLMHQQP 390
>BC068000-1|AAH68000.1| 594|Homo sapiens CHD7 protein protein.
Length = 594
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 207 LGRRVPFLQKLQRLPSLLGPKTFSGHGPMHQKP 109
L P Q + R P+ +G + SG G MHQ+P
Sbjct: 328 LTNNTPMNQSVPRYPNAVGFPSNSGQGLMHQQP 360
>BC053890-1|AAH53890.1| 594|Homo sapiens CHD7 protein protein.
Length = 594
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 207 LGRRVPFLQKLQRLPSLLGPKTFSGHGPMHQKP 109
L P Q + R P+ +G + SG G MHQ+P
Sbjct: 328 LTNNTPMNQSVPRYPNAVGFPSNSGQGLMHQQP 360
>BC014681-1|AAH14681.1| 637|Homo sapiens Unknown (protein for
IMAGE:3866722) protein.
Length = 637
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 207 LGRRVPFLQKLQRLPSLLGPKTFSGHGPMHQKP 109
L P Q + R P+ +G + SG G MHQ+P
Sbjct: 328 LTNNTPMNQSVPRYPNAVGFPSNSGQGLMHQQP 360
>AK123158-1|BAC85544.1| 572|Homo sapiens protein ( Homo sapiens
cDNA FLJ41163 fis, clone BRACE2039734. ).
Length = 572
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 207 LGRRVPFLQKLQRLPSLLGPKTFSGHGPMHQKP 109
L P Q + R P+ +G + SG G MHQ+P
Sbjct: 90 LTNNTPMNQSVPRYPNAVGFPSNSGQGLMHQQP 122
>AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = -3
Query: 228 RILHQTRLGRRVPF-LQKLQRLPS----LLGPKTFSGHGPMHQKPTSAFCSNVSQEL 73
++L Q ++ R ++++Q PS LLGP+ F G GPM Q P + SQ++
Sbjct: 554 QLLEQLKIERLAQKQVEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQGFQQPHPSQQM 610
>AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.
Length = 1336
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = -3
Query: 228 RILHQTRLGRRVPF-LQKLQRLPS----LLGPKTFSGHGPMHQKPTSAFCSNVSQEL 73
++L Q ++ R ++++Q PS LLGP+ F G GPM Q P + SQ++
Sbjct: 554 QLLEQLKIERLAQKQVEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQGFQQPHPSQQM 610
>D86984-1|BAA13220.2| 823|Homo sapiens KIAA0231 protein protein.
Length = 823
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 119 TRSRLQHFVQTFHRNFGKDNKWLPETIDKTLFDSRRLP 6
T SRL+HFV H+ F D+ W + +T+ + P
Sbjct: 165 TSSRLEHFVAILHKCF--DSPWTTRALSETVAEQSVRP 200
>BC060782-1|AAH60782.1| 803|Homo sapiens LRRC8B protein protein.
Length = 803
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 119 TRSRLQHFVQTFHRNFGKDNKWLPETIDKTLFDSRRLP 6
T SRL+HFV H+ F D+ W + +T+ + P
Sbjct: 145 TSSRLEHFVAILHKCF--DSPWTTRALSETVAEQSVRP 180
>BC030607-1|AAH30607.1| 803|Homo sapiens leucine rich repeat
containing 8 family, member B protein.
Length = 803
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 119 TRSRLQHFVQTFHRNFGKDNKWLPETIDKTLFDSRRLP 6
T SRL+HFV H+ F D+ W + +T+ + P
Sbjct: 145 TSSRLEHFVAILHKCF--DSPWTTRALSETVAEQSVRP 180
>AY358112-1|AAQ88479.1| 802|Homo sapiens ITLT6413 protein.
Length = 802
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 119 TRSRLQHFVQTFHRNFGKDNKWLPETIDKTLFDSRRLP 6
T SRL+HFV H+ F D+ W + +T+ + P
Sbjct: 145 TSSRLEHFVAILHKCF--DSPWTTRALSETVAEQSVRP 180
>AF385436-1|AAM43837.1| 803|Homo sapiens T-cell activation leucine
repeat-rich protein protein.
Length = 803
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 119 TRSRLQHFVQTFHRNFGKDNKWLPETIDKTLFDSRRLP 6
T SRL+HFV H+ F D+ W + +T+ + P
Sbjct: 145 TSSRLEHFVAILHKCF--DSPWTTRALSETVAEQSVRP 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,978,151
Number of Sequences: 237096
Number of extensions: 1300809
Number of successful extensions: 3017
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3017
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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