Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_N19
(491 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 75 8e-15
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 68 9e-13
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 60 1e-10
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 28 0.88
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 28 0.88
SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyce... 27 2.0
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 26 3.5
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 25 4.7
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 25 4.7
SPCC338.10c |cox5||cytochrome c oxidase subunit V|Schizosaccharo... 25 4.7
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 25 6.2
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 25 6.2
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 25 8.2
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 74.5 bits (175), Expect = 8e-15
Identities = 52/154 (33%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Frame = +2
Query: 38 WLSIGSVFLGCCFSVKYSGLYTYYLSVFLVGRHLWRRFGHLESGLLLTI---STLWRLIV 208
WL FL C S KY G +T+ V LW + +++GL + L R
Sbjct: 231 WLFFTGFFLSCTISTKYVGFFTFLSIGLSVCLELWYLWD-IKTGLTVERFFQHFLARFFC 289
Query: 209 LIVIPLSVYVGVFYAHLIMLPKAGPHDSVMTSAFQASLQGGLASITRGQPLHVAHGSQIT 388
LI P ++ FY H +L +GP DS M+ FQ +L IT + + + +T
Sbjct: 290 LIFFPFLFFLFWFYMHFNILTISGPGDSFMSLEFQETLSDN--PITANSTI-LNYYDIVT 346
Query: 389 LRHTHGRTCWLHSHAHVYPVRYADGRGSSHQQQV 490
++H G +LHSH YP+ Y DGR SS QQV
Sbjct: 347 IKHM-GTNAFLHSHPEKYPIPYDDGRISSGGQQV 379
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 67.7 bits (158), Expect = 9e-13
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Frame = +2
Query: 38 WLSIGSVFLGCCFSVKYSGLY-TYYLSVFLVGRHLWRRFGHLE-SGLLLTISTLWRLIVL 211
WL + V +GC SVK GL+ T + ++ V LW + + R+ +L
Sbjct: 228 WLFLTGVCIGCVCSVKLVGLFITAVVGLYTVDE-LWCLLNDKRVTWKAYAGHWIARVCLL 286
Query: 212 IVIPLSVYVGVFYAHLIMLPKAGPHDSVMTSAFQASLQGGLASITRGQPLHVAHGSQITL 391
I +P+ +Y F+ +L ++GP D+ M S FQA L+G + +T+ P+ + +GS+ TL
Sbjct: 287 IFLPILIYAFTFWIQFAVLYRSGPGDAQMPSLFQARLEG--SPLTK-NPIDLMYGSKFTL 343
Query: 392 RHTHGRTCWLHSHAHVYP 445
+ + LHSH YP
Sbjct: 344 KSRNPTGALLHSHVQTYP 361
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 60.5 bits (140), Expect = 1e-10
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Frame = +2
Query: 41 LSIGSVFLGCCFSVKYSGLYTYYLSVFLVGRHLWRRFGHLESGLLLTISTLWRLIV-LIV 217
LS G V LG S K S ++T+ + L HLW G L + + L+ I LI
Sbjct: 208 LSTG-VALGLALSTKLSAMFTFGWLLILAAFHLWNLLGDLSVPMYRIVKHLFSYIFYLIG 266
Query: 218 IPLSVYVGVFYAHLIMLPKAGPHDSVMTSAFQASLQGGLASITRGQPLHVAHGSQITLRH 397
+P++VY+ VF H + KA D+ + + +L G Q VA+GS +T+R+
Sbjct: 267 VPITVYLAVFAVHSHIAYKASVADAFLPPEHRHALAGNRFD---DQFADVAYGSLVTIRN 323
Query: 398 THGRTCWLHSHAHVYP 445
+LHS +YP
Sbjct: 324 AIPEHGYLHSSELLYP 339
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 27.9 bits (59), Expect = 0.88
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = +2
Query: 299 TSAFQASLQGGLASITRGQPLHVAHGSQITLRHTHGRTCWLHSHAHVYPVRYADGRGSSH 478
T A QA+LQ G SIT H +Q T R T S +H P R G GS +
Sbjct: 71 THAQQANLQSGNTSIT--------HETQSTSRGQEATTSPSLSASHEKPARPQTGEGSDN 122
Query: 479 QQQ 487
+ +
Sbjct: 123 EDE 125
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 27.9 bits (59), Expect = 0.88
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 45 PLVLYFWVAVFQ*NIQGYIHITYQFSW 125
P ++YFW++ I +I +QFSW
Sbjct: 1506 PHLIYFWISTLAMCISPFIFNPHQFSW 1532
>SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 26.6 bits (56), Expect = 2.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 59 FLGCCFSVKYSGLYTYYLSVFLVGRHLWRRFG 154
FLG S + GL YY+S + G+HL +R G
Sbjct: 193 FLGVAESGLWPGL-AYYMSRWYRGKHLGKRIG 223
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 25.8 bits (54), Expect = 3.5
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 53 SVFLGCCFSVKYSGLYTYYLSVFLVGRHLWRRFGHLESGLLLTI 184
S LG C ++ S L+ + S+ G +W G + G+L T+
Sbjct: 489 SAALGKCGAILASLLFNFLTSIIGYGNVMWIFCGCMWGGILFTL 532
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 25.4 bits (53), Expect = 4.7
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 45 PLVLYFWVAVFQ*NIQGYIHITYQFSW 125
P +YFW+ + I +++ +QF+W
Sbjct: 1348 PHYIYFWITLTALCISPFLYNPHQFAW 1374
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 25.4 bits (53), Expect = 4.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 292 CDDKCIPGISTGGSCK 339
C KC GI +GG CK
Sbjct: 554 CSKKCCDGILSGGLCK 569
>SPCC338.10c |cox5||cytochrome c oxidase subunit
V|Schizosaccharomyces pombe|chr 3|||Manual
Length = 174
Score = 25.4 bits (53), Expect = 4.7
Identities = 7/34 (20%), Positives = 21/34 (61%)
Frame = +3
Query: 60 FWVAVFQ*NIQGYIHITYQFSWWGDISGVDLVIL 161
+W+A + + + HI+ + +WG ++G+ + ++
Sbjct: 78 YWIAFGEHGPRAFSHISQKTVFWGTVAGLTIGVV 111
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 25.0 bits (52), Expect = 6.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 281 PHDSVMTSAFQASLQGGLASITRGQPLHVAHGSQITLRHTHGRTCWLHSHAHVYPV 448
P+D+V+ S + G R Q +G +I L+H H T LH+ PV
Sbjct: 16 PNDAVLNYDLVPSAKPGDIFEIRAQ-----NGDEIALQHNHSSTGKLHAKREKEPV 66
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 25.0 bits (52), Expect = 6.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 385 NLRTMRNMQWLSTCYACKTPL*RCLECTCHH 293
NL+T+ + LS Y + RC++ CH+
Sbjct: 872 NLKTLPTLMDLSLSYHAEELYSRCIDYACHN 902
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 24.6 bits (51), Expect = 8.2
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 53 SVFLGCCFSVKYSGLYTYYLSVFLVGRHLWRRFGHLESGLLLTI 184
S LG C ++ S L+ + V G +W G + G+L T+
Sbjct: 488 SAALGKCGAILASLLFNFLTGVIGYGNVMWIFCGCMWGGILFTL 531
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,091,777
Number of Sequences: 5004
Number of extensions: 44445
Number of successful extensions: 134
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 192109570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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