Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_N19
(491 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81124-8|CAD56599.1| 426|Caenorhabditis elegans Hypothetical pr... 32 0.26
AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical ... 29 1.8
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 29 2.4
Z70780-1|CAA94819.1| 336|Caenorhabditis elegans Hypothetical pr... 28 3.2
U80024-3|AAK18893.1| 342|Caenorhabditis elegans Seven tm recept... 28 4.2
AF025459-2|AAB70985.1| 252|Caenorhabditis elegans Mesodermal li... 27 5.6
Z50005-1|CAA90294.1| 334|Caenorhabditis elegans Hypothetical pr... 27 7.4
U88166-2|AAO44911.1| 118|Caenorhabditis elegans Hypothetical pr... 27 7.4
U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in bl... 27 7.4
AF068713-2|AAC17805.1| 347|Caenorhabditis elegans Seven tm rece... 27 7.4
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 27 9.8
AC006673-3|AAF39929.1| 861|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z81124-8|CAD56599.1| 426|Caenorhabditis elegans Hypothetical
protein T21B4.14 protein.
Length = 426
Score = 31.9 bits (69), Expect = 0.26
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +2
Query: 74 FSVKYSGLYTYYLSVFLVGRHLWRRFGHLESGLLLTISTLWRLIVLIVIPLSVYVGVFYA 253
F S LY YYL+ + L RF +SGL LT + +I L+ +P+ ++ G Y
Sbjct: 77 FMQSSSPLYNYYLTFYNTNCSLDDRFLVSKSGLALTCN----IIGLVALPIQIFTG--YC 130
Query: 254 HLIMLPK 274
L PK
Sbjct: 131 ILRKTPK 137
>AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical
protein Y69A2AR.19 protein.
Length = 1256
Score = 29.1 bits (62), Expect = 1.8
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Frame = +2
Query: 107 YLSVFLVGRHLWRRFGHLESGLLLT--ISTLWRLIVLIVIPLSVYVGVFYAHLIMLPKAG 280
+L+ FLV H G +SG+ +T I + ++ LI + + +Y GV + +
Sbjct: 830 FLAKFLVTTHS-NSTGGSDSGISITLIIIIVGSILALIGVAVGIYFGVRWYEKKKAAEQM 888
Query: 281 PHDSVMTSAFQASLQGGLASITRGQPLHVAHGSQITL 391
H+ V+ QA A I LHV G+Q ++
Sbjct: 889 EHEIVVWVKAQAYKSLEAAIIVLVASLHVVWGTQTSV 925
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -3
Query: 423 CNQQVR-PCVCLRVI*EPCATCNGCPRVMLARPPC 322
C QQ PC PC TCN P V++ PC
Sbjct: 183 CPQQAACPCTTCNQPPPPCNTCNTQPVVIVTPAPC 217
>Z70780-1|CAA94819.1| 336|Caenorhabditis elegans Hypothetical
protein F46B6.2 protein.
Length = 336
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +1
Query: 28 CSYLVIHWFCIFGLLFFSKIFRAIYILLISFPGGETSLASIWSS*IRSFTYYFNIMETYC 207
CS L F F + A + + + +P + S I F ++ ++METYC
Sbjct: 32 CSPLFFFLFPFINSAF--GLVTAFHAIFLRYPNRCDFYLQLTCSSIGFFFFFSSLMETYC 89
Query: 208 INCYTF 225
IN + +
Sbjct: 90 INEFKY 95
>U80024-3|AAK18893.1| 342|Caenorhabditis elegans Seven tm receptor
protein 190 protein.
Length = 342
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +2
Query: 86 YSGLYTYYLSVFLVGRHLWRRFGHLESGLLLTISTLWRLIVLIVIPLSVYVGVFYAHLI 262
Y+G++ ++VF H R+G +E ++ WR L ++PL +Y GV++ L+
Sbjct: 89 YAGIFGASMAVF--ASHFIYRYGCIEKTFGTKCTSNWRFGFLFIVPL-LY-GVWWGTLV 143
>AF025459-2|AAB70985.1| 252|Caenorhabditis elegans Mesodermal
lineage specificationprotein 1 protein.
Length = 252
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 107 YLSVFLVGRHLWRRFGHLESGLLLTIS 187
++ VFL +LWRRF +L + +++T S
Sbjct: 30 FIRVFLQSSNLWRRFHNLGTEMIVTKS 56
>Z50005-1|CAA90294.1| 334|Caenorhabditis elegans Hypothetical
protein F16H9.2 protein.
Length = 334
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 193 METYCINCYTFERICGRILCTFNYASQS 276
M TY NC +CGR+ FNY + S
Sbjct: 1 MSTYVSNCV----VCGRLTSLFNYGAHS 24
>U88166-2|AAO44911.1| 118|Caenorhabditis elegans Hypothetical
protein M01A12.3 protein.
Length = 118
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = +2
Query: 134 HLWRRFGHLESGLLLTISTLWRLIVLIVIPLSVYVGVFYAHLIML 268
++WR+ G + L++ST+ + V ++ P+ V++ +F HL +L
Sbjct: 3 YIWRQLGSPTVAITLSVSTV--IYVTVICPI-VFIHLFGDHLNVL 44
>U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 10 protein.
Length = 375
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 435 CACECNQQVRPCVCLRVI*EPCA 367
CAC+ QQ C C V +PCA
Sbjct: 63 CACQPQQQQPACNCAPVQQDPCA 85
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 435 CACECNQQVRPCVCLRVI*EPCA 367
CAC+ QQ C C V +PCA
Sbjct: 84 CACQPQQQQPACNCAPVQQDPCA 106
>AF068713-2|AAC17805.1| 347|Caenorhabditis elegans Seven tm
receptor protein 260 protein.
Length = 347
Score = 27.1 bits (57), Expect = 7.4
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +2
Query: 23 LIAAIWLSIGSVFLGCCFSVKYSGLYTYYLSVFLVGRHLWRRFGHLESGLLLTISTLWRL 202
LIA SI + CC + Y G Y L++ + H RF + + L W++
Sbjct: 71 LIANFKQSIFPKLMACCSVLFYGGFYGITLAILAL--HFIYRFLSITNNRHLNSFNSWKI 128
Query: 203 IVLIVIP 223
I+ + P
Sbjct: 129 ILWFMGP 135
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 14 TSGLIAAIWLSIGSVFLGCCFSVKYSGLYTYYLSVFLVG 130
TSGLI + +G S K +GL+ + SVF++G
Sbjct: 38 TSGLINFVCGMMGPGCFSLAVSFKQAGLWGGFASVFIIG 76
>AC006673-3|AAF39929.1| 861|Caenorhabditis elegans Hypothetical
protein K09D9.11 protein.
Length = 861
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +2
Query: 74 FSVKYSGLYTYYLSVFLVGRHLWRRFGHLESGLLLTISTLWRLIVLIVIPLSVYVGVFYA 253
FS +S L ++V + FGH+++ + + LW I+LI I +++ + + Y
Sbjct: 422 FSKHHSTLKGARVTVISLTEFYDEIFGHVKTNTVTVKTILWLEILLICIGVALLILIAYV 481
Query: 254 HLIMLPKAG 280
+ L G
Sbjct: 482 VIYGLTATG 490
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,889,276
Number of Sequences: 27780
Number of extensions: 269377
Number of successful extensions: 785
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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