BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_N18
(579 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051501-1|AAK92925.1| 839|Drosophila melanogaster GH15453p pro... 198 4e-51
AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,... 198 4e-51
L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy... 196 2e-50
AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB... 41 0.001
AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA... 41 0.001
AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA... 31 1.1
BT011410-1|AAR96202.1| 1887|Drosophila melanogaster AT19428p pro... 30 2.6
BT001345-1|AAN71100.1| 722|Drosophila melanogaster AT23409p pro... 30 2.6
L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic d... 29 3.4
AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA... 29 3.4
AE014296-1601|AAF50308.1| 435|Drosophila melanogaster CG4483-PA... 29 3.4
BT015273-1|AAT94502.1| 2064|Drosophila melanogaster LD20667p pro... 29 4.5
AY069617-1|AAL39762.1| 787|Drosophila melanogaster LD38414p pro... 29 4.5
AY052100-1|AAK93524.1| 757|Drosophila melanogaster SD04906p pro... 29 4.5
AL024456-1|CAA19660.1| 515|Drosophila melanogaster EG:131F2.2 p... 29 4.5
AE014298-264|AAN09060.1| 742|Drosophila melanogaster CG14801-PD... 29 4.5
AE014298-263|AAF45671.2| 761|Drosophila melanogaster CG14801-PC... 29 4.5
AE014298-262|AAF45670.2| 761|Drosophila melanogaster CG14801-PA... 29 4.5
AE014298-261|AAF45669.2| 787|Drosophila melanogaster CG14801-PB... 29 4.5
AE014134-16|AAF51561.2| 2064|Drosophila melanogaster CG11376-PA ... 29 4.5
AY118715-1|AAM50575.1| 435|Drosophila melanogaster AT26975p pro... 28 7.9
AY113261-1|AAM29266.1| 199|Drosophila melanogaster AT15479p pro... 28 7.9
AE014297-232|AAN13279.1| 199|Drosophila melanogaster CG31542-PA... 28 7.9
>AY051501-1|AAK92925.1| 839|Drosophila melanogaster GH15453p protein.
Length = 839
Score = 198 bits (483), Expect = 4e-51
Identities = 96/171 (56%), Positives = 122/171 (71%), Gaps = 1/171 (0%)
Frame = +1
Query: 67 DLVTKLLKMQQLEDEEELAYNAASQDHDASSVVLG-DGRPAWMKTLHQTATNWXXXXXXX 243
DLV+KLLKMQQLED++ELAY+ Q + S+V G DGRP+WMKTLH +AT W
Sbjct: 526 DLVSKLLKMQQLEDDDELAYSVEDQS-EQSAVGRGEDGRPSWMKTLHNSATAWLELLPKN 584
Query: 244 XXXXXXXVENIKDPLYRFFEREVAAGASLLQQVLHDLRNVISICQGEMKQTNETRAMVGS 423
VENIKDPLYR+FEREV +G+ LLQ V+ DL++V+ ICQGE KQTN R+M+
Sbjct: 585 LQVLKRTVENIKDPLYRYFEREVTSGSRLLQTVILDLQDVVLICQGEKKQTNHHRSMLSE 644
Query: 424 LVRGMLPSSWRRYAVARGCTVQQWVGDFAHRVAQLAAVSDTVAASGAQRLQ 576
LVRG++P W+RY V GCTV QW+ DF++RV QL VS V+ +GA+ LQ
Sbjct: 645 LVRGIIPKGWKRYTVPAGCTVIQWITDFSNRVQQLQKVSQLVSQAGAKELQ 695
Score = 34.7 bits (76), Expect = 0.092
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 9 PSWLGLPNNAEKVYL 53
PSWLGLPNNAEKV L
Sbjct: 506 PSWLGLPNNAEKVLL 520
>AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,
isoform A protein.
Length = 4639
Score = 198 bits (483), Expect = 4e-51
Identities = 96/171 (56%), Positives = 122/171 (71%), Gaps = 1/171 (0%)
Frame = +1
Query: 67 DLVTKLLKMQQLEDEEELAYNAASQDHDASSVVLG-DGRPAWMKTLHQTATNWXXXXXXX 243
DLV+KLLKMQQLED++ELAY+ Q + S+V G DGRP+WMKTLH +AT W
Sbjct: 4326 DLVSKLLKMQQLEDDDELAYSVEDQS-EQSAVGRGEDGRPSWMKTLHNSATAWLELLPKN 4384
Query: 244 XXXXXXXVENIKDPLYRFFEREVAAGASLLQQVLHDLRNVISICQGEMKQTNETRAMVGS 423
VENIKDPLYR+FEREV +G+ LLQ V+ DL++V+ ICQGE KQTN R+M+
Sbjct: 4385 LQVLKRTVENIKDPLYRYFEREVTSGSRLLQTVILDLQDVVLICQGEKKQTNHHRSMLSE 4444
Query: 424 LVRGMLPSSWRRYAVARGCTVQQWVGDFAHRVAQLAAVSDTVAASGAQRLQ 576
LVRG++P W+RY V GCTV QW+ DF++RV QL VS V+ +GA+ LQ
Sbjct: 4445 LVRGIIPKGWKRYTVPAGCTVIQWITDFSNRVQQLQKVSQLVSQAGAKELQ 4495
Score = 34.7 bits (76), Expect = 0.092
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 9 PSWLGLPNNAEKVYL 53
PSWLGLPNNAEKV L
Sbjct: 4306 PSWLGLPNNAEKVLL 4320
>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dynein
heavy chian protein.
Length = 4639
Score = 196 bits (478), Expect = 2e-50
Identities = 95/171 (55%), Positives = 121/171 (70%), Gaps = 1/171 (0%)
Frame = +1
Query: 67 DLVTKLLKMQQLEDEEELAYNAASQDHDASSVVLG-DGRPAWMKTLHQTATNWXXXXXXX 243
DLV+KLLKMQQLED++ELAY+ Q + S+V G DGRP+WMK LH +AT W
Sbjct: 4326 DLVSKLLKMQQLEDDDELAYSVEDQS-EQSAVGRGEDGRPSWMKALHNSATAWLELLPKN 4384
Query: 244 XXXXXXXVENIKDPLYRFFEREVAAGASLLQQVLHDLRNVISICQGEMKQTNETRAMVGS 423
VENIKDPLYR+FEREV +G+ LLQ V+ DL++V+ ICQGE KQTN R+M+
Sbjct: 4385 LQVLKRTVENIKDPLYRYFEREVTSGSRLLQTVILDLQDVVLICQGEKKQTNHHRSMLSE 4444
Query: 424 LVRGMLPSSWRRYAVARGCTVQQWVGDFAHRVAQLAAVSDTVAASGAQRLQ 576
LVRG++P W+RY V GCTV QW+ DF++RV QL VS V+ +GA+ LQ
Sbjct: 4445 LVRGIIPKGWKRYTVPAGCTVIQWITDFSNRVQQLQKVSQLVSQAGAKELQ 4495
Score = 34.7 bits (76), Expect = 0.092
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 9 PSWLGLPNNAEKVYL 53
PSWLGLPNNAEKV L
Sbjct: 4306 PSWLGLPNNAEKVLL 4320
>AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB,
isoform B protein.
Length = 4685
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +1
Query: 325 SLLQQVLHDLRNVISICQGEMKQTNETRAMVGSLVRGMLPSSWRRYAVARGCTVQQWVGD 504
+L++++ LR ++ +GE+ T E + ++ +P++W R A +Q W D
Sbjct: 4463 ALIREIKRSLRELMLGLRGELTITQEMERLDHAIFYDHVPAAWARLAYPSMLGLQSWFAD 4522
Query: 505 FAHRVAQLA 531
HR+ +LA
Sbjct: 4523 LLHRIKELA 4531
>AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA,
isoform A protein.
Length = 4543
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +1
Query: 325 SLLQQVLHDLRNVISICQGEMKQTNETRAMVGSLVRGMLPSSWRRYAVARGCTVQQWVGD 504
+L++++ LR ++ +GE+ T E + ++ +P++W R A +Q W D
Sbjct: 4321 ALIREIKRSLRELMLGLRGELTITQEMERLDHAIFYDHVPAAWARLAYPSMLGLQSWFAD 4380
Query: 505 FAHRVAQLA 531
HR+ +LA
Sbjct: 4381 LLHRIKELA 4389
>AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA
protein.
Length = 5106
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 331 LQQVLHDLRNVI-SICQGEMKQTNETRAMVGSLVRGMLPSSWRRYAVARGCTVQQWVGDF 507
+++ L LR V S GE+ N + SL G+LP++W + A A + W+
Sbjct: 4879 IKKTLELLRKVTYSAIAGEIGMDNVLDNIANSLFNGLLPAAWSKLAPATCKQLASWLEHL 4938
Query: 508 AHRVAQ 525
R Q
Sbjct: 4939 RLRAVQ 4944
>BT011410-1|AAR96202.1| 1887|Drosophila melanogaster AT19428p protein.
Length = 1887
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +1
Query: 331 LQQVLHDLRNVISICQGEMKQTNETRAMVGSLVRGMLPSSWRRYAVARGCTVQQWVGDFA 510
+++ L LR I+ GE+ N + SL G+LP++W + A A + W+
Sbjct: 1664 IKKTLELLRKAIA---GEIGMDNVLDNIANSLFNGLLPAAWSKLAPATCKQLASWLEHLR 1720
Query: 511 HRVAQ 525
R Q
Sbjct: 1721 LRAVQ 1725
>BT001345-1|AAN71100.1| 722|Drosophila melanogaster AT23409p
protein.
Length = 722
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +1
Query: 331 LQQVLHDLRNVISICQGEMKQTNETRAMVGSLVRGMLPSSWRRYAVARGCTVQQWVGDFA 510
+++ L LR I+ GE+ N + SL G+LP++W + A A + W+
Sbjct: 499 IKKTLELLRKAIA---GEIGMDNVLDNIANSLFNGLLPAAWSKLAPATCKQLASWLEHLR 555
Query: 511 HRVAQ 525
R Q
Sbjct: 556 LRAVQ 560
>L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic
discs protein protein.
Length = 2895
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 164 TTELASWSCEAALYAXXXXXXSCCIFNSFVTRSYLEL*V-HLFSVIR 27
T +A+W E Y SCC FN F++ S ++ V L++V++
Sbjct: 427 TNRVATWMDEQLGYIGAKLEHSCCAFNEFISDSITKIYVCSLYTVVK 473
>AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA
protein.
Length = 2885
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 164 TTELASWSCEAALYAXXXXXXSCCIFNSFVTRSYLEL*V-HLFSVIR 27
T +A+W E Y SCC FN F++ S ++ V L++V++
Sbjct: 430 TNRVATWMDEQLGYIGAKLEHSCCAFNEFISDSITKIYVCSLYTVVK 476
>AE014296-1601|AAF50308.1| 435|Drosophila melanogaster CG4483-PA
protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 56 TQGMISSQSC*RCNNWKTKRSSHTMRLHRTTM 151
T+ + Q C RCN +K RS H R +R M
Sbjct: 85 TKDKMFLQFCTRCNGYKAPRSHHCRRCNRCVM 116
>BT015273-1|AAT94502.1| 2064|Drosophila melanogaster LD20667p protein.
Length = 2064
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 516 AVREVPDPLLHGAAAR-DRVPAPGGGQHAAHKRTDHRARLIRL 391
AV EVP+P LHG A R R A + TD RAR+ L
Sbjct: 1151 AVMEVPNPQLHGKAIRCIRNLMTSHDLDARYSETDARARVAAL 1193
>AY069617-1|AAL39762.1| 787|Drosophila melanogaster LD38414p
protein.
Length = 787
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -2
Query: 554 AATVSETAASCATRCAKSPTHCCTVQPRATAYRRQEEGSMPRTSEPTIARVSFVCFISP 378
++ +S +S T SPT+ T PRA R++ E ++ E + R + + P
Sbjct: 326 SSALSSPTSSATTSATSSPTNSPTSYPRANGNRKRIEAALEWRREQELGRQNANFLVPP 384
>AY052100-1|AAK93524.1| 757|Drosophila melanogaster SD04906p
protein.
Length = 757
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -2
Query: 554 AATVSETAASCATRCAKSPTHCCTVQPRATAYRRQEEGSMPRTSEPTIARVSFVCFISP 378
++ +S +S T SPT+ T PRA R++ E ++ E + R + + P
Sbjct: 296 SSALSSPTSSATTSATSSPTNSPTSYPRANGNRKRIEAALEWRREQELGRQNANFLVPP 354
>AL024456-1|CAA19660.1| 515|Drosophila melanogaster EG:131F2.2
protein.
Length = 515
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -2
Query: 554 AATVSETAASCATRCAKSPTHCCTVQPRATAYRRQEEGSMPRTSEPTIARVSFVCFISP 378
++ +S +S T SPT+ T PRA R++ E ++ E + R + + P
Sbjct: 54 SSALSSPTSSATTSATSSPTNSPTSYPRANGNRKRIEAALEWRREQELGRQNANFLVPP 112
>AE014298-264|AAN09060.1| 742|Drosophila melanogaster CG14801-PD,
isoform D protein.
Length = 742
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -2
Query: 554 AATVSETAASCATRCAKSPTHCCTVQPRATAYRRQEEGSMPRTSEPTIARVSFVCFISP 378
++ +S +S T SPT+ T PRA R++ E ++ E + R + + P
Sbjct: 281 SSALSSPTSSATTSATSSPTNSPTSYPRANGNRKRIEAALEWRREQELGRQNANFLVPP 339
>AE014298-263|AAF45671.2| 761|Drosophila melanogaster CG14801-PC,
isoform C protein.
Length = 761
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -2
Query: 554 AATVSETAASCATRCAKSPTHCCTVQPRATAYRRQEEGSMPRTSEPTIARVSFVCFISP 378
++ +S +S T SPT+ T PRA R++ E ++ E + R + + P
Sbjct: 300 SSALSSPTSSATTSATSSPTNSPTSYPRANGNRKRIEAALEWRREQELGRQNANFLVPP 358
>AE014298-262|AAF45670.2| 761|Drosophila melanogaster CG14801-PA,
isoform A protein.
Length = 761
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -2
Query: 554 AATVSETAASCATRCAKSPTHCCTVQPRATAYRRQEEGSMPRTSEPTIARVSFVCFISP 378
++ +S +S T SPT+ T PRA R++ E ++ E + R + + P
Sbjct: 300 SSALSSPTSSATTSATSSPTNSPTSYPRANGNRKRIEAALEWRREQELGRQNANFLVPP 358
>AE014298-261|AAF45669.2| 787|Drosophila melanogaster CG14801-PB,
isoform B protein.
Length = 787
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -2
Query: 554 AATVSETAASCATRCAKSPTHCCTVQPRATAYRRQEEGSMPRTSEPTIARVSFVCFISP 378
++ +S +S T SPT+ T PRA R++ E ++ E + R + + P
Sbjct: 326 SSALSSPTSSATTSATSSPTNSPTSYPRANGNRKRIEAALEWRREQELGRQNANFLVPP 384
>AE014134-16|AAF51561.2| 2064|Drosophila melanogaster CG11376-PA
protein.
Length = 2064
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 516 AVREVPDPLLHGAAAR-DRVPAPGGGQHAAHKRTDHRARLIRL 391
AV EVP+P LHG A R R A + TD RAR+ L
Sbjct: 1151 AVMEVPNPQLHGKAIRCIRNLMTSHDLDARYSETDARARVAAL 1193
>AY118715-1|AAM50575.1| 435|Drosophila melanogaster AT26975p
protein.
Length = 435
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 77 QSC*RCNNWKTKRSSHTMRLHRTTM 151
Q C RCN +K RS H R R M
Sbjct: 92 QFCTRCNGYKAPRSHHCRRCDRCVM 116
>AY113261-1|AAM29266.1| 199|Drosophila melanogaster AT15479p
protein.
Length = 199
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -2
Query: 575 CRRWAPEAATVSETAASCATRCAKSPTHCCTVQPRATAYRRQEEGSMPRTSEPTIARVS 399
C R E ET +C + AK+ HC P A +Q++ +M ++PT A V+
Sbjct: 105 CSRGPREQPPALETRCTCREKPAKTECHC--APPVAPPPNQQQQQAM---AQPTYANVT 158
>AE014297-232|AAN13279.1| 199|Drosophila melanogaster CG31542-PA
protein.
Length = 199
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -2
Query: 575 CRRWAPEAATVSETAASCATRCAKSPTHCCTVQPRATAYRRQEEGSMPRTSEPTIARVS 399
C R E ET +C + AK+ HC P A +Q++ +M ++PT A V+
Sbjct: 105 CSRGPREQPPALETRCTCREKPAKTECHC--APPVAPPPNQQQQQAM---AQPTYANVT 158
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,449,823
Number of Sequences: 53049
Number of extensions: 454485
Number of successful extensions: 1642
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1639
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -