Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_N12
         (462 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   6.5  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   6.5  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 261 AMPRDALDTLDALY 302
           A PRD L  LDAL+
Sbjct: 92  ATPRDFLQNLDALH 105


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 261 AMPRDALDTLDALY 302
           A PRD L  LDAL+
Sbjct: 92  ATPRDFLQNLDALH 105


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -2

Query: 458 PRRDGQSTVV 429
           P++DGQ+TVV
Sbjct: 54  PKKDGQATVV 63


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 165 LYQCRRTYTVNMSRELTLIA 224
           LY C+RT T+  + +  L A
Sbjct: 171 LYNCKRTATITAATDCQLWA 190


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,140
Number of Sequences: 438
Number of extensions: 2200
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)