Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_N09
(414 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0151 - 21237677-21237704,21237759-21237829,21238101-212382... 57 5e-09
12_01_0741 + 6649988-6653065 32 0.21
03_05_0501 - 24944533-24945507 31 0.36
08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767 30 0.84
05_03_0376 - 13252220-13252354,13252433-13252541,13253279-132533... 29 1.1
11_06_0179 + 20952070-20955228 29 1.9
01_06_0065 + 26107522-26107700,26110875-26111253 29 1.9
03_02_0766 - 11003746-11003902,11004037-11004281,11004379-110045... 28 2.6
02_01_0037 + 261405-261779,261880-262065,262185-262271,262341-26... 28 2.6
01_06_0633 - 30741716-30742432 28 2.6
10_05_0051 + 8576660-8576726,8579724-8579888,8579984-8581128 28 3.4
10_01_0299 - 3101028-3102022,3103004-3103177,3105272-3106190 28 3.4
09_06_0127 + 21019266-21019670 28 3.4
07_01_0983 + 8287866-8287871,8289353-8289583,8289647-8290408 28 3.4
11_01_0776 + 6476743-6477539,6478658-6479481,6479803-6480790,648... 27 4.5
02_01_0384 - 2781362-2782299,2782320-2782428 27 4.5
08_02_0937 + 22801526-22802461 27 5.9
07_01_0746 + 5714443-5714580,5715175-5715261,5715400-5715657,571... 27 5.9
06_01_0219 + 1666921-1667120,1667418-1667466,1669432-1669626 27 5.9
05_04_0328 - 20303330-20303440,20304123-20304942,20305170-203053... 27 5.9
02_05_0459 + 29217728-29217919,29218095-29218190,29219785-292198... 27 5.9
01_03_0113 - 12647599-12648052,12648078-12648319 27 5.9
10_08_0487 - 18253355-18253408,18255645-18257495 27 7.8
09_01_0180 + 2632507-2634870 27 7.8
06_03_1255 + 28780181-28781172,28782065-28782932 27 7.8
06_03_0549 - 22016553-22016573,22016972-22017369,22018059-22018815 27 7.8
04_04_1385 - 33157557-33157655,33157752-33158201,33158864-331590... 27 7.8
04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072 27 7.8
>09_06_0151 -
21237677-21237704,21237759-21237829,21238101-21238281,
21238369-21238441,21239033-21239072,21239818-21239890,
21240075-21240151,21241033-21241138,21241256-21241278,
21241369-21241440
Length = 247
Score = 57.2 bits (132), Expect = 5e-09
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
Frame = +2
Query: 38 VVDILDKGSSAVAIVNS--EVFQNKQLICRTQQHIFVLGQGGFGGPRNS-------KNAV 190
+ + DKG + + + + V + +++C + I++ G GGF P N V
Sbjct: 124 IAGLHDKGKATILEIETTTHVKDSGEVLCMNRSTIYLRGAGGFSDPSRPYSYASYPTNQV 183
Query: 191 PVQDAPKRAPDAVLEQQTAEDQAA----------LYRMSGDLNPLHIDPNVATASG 328
P AP AV E QT + QA LYR+SGD NPLH DP VA +G
Sbjct: 184 SRISIPNSAPSAVYEDQTQQSQACCSFGMLFYALLYRLSGDYNPLHSDPMVAQVAG 239
>12_01_0741 + 6649988-6653065
Length = 1025
Score = 31.9 bits (69), Expect = 0.21
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -3
Query: 202 VLYGNSVLTITRSTETPLPQNKYVLLCATNKLLVLEHLAVNNGDSTG-PLVEYIDDIASC 26
+L+ NS + I T QN YVL + NKL+V++ NN P + ++ +ASC
Sbjct: 460 LLHSNSFVGIVELTSYSKLQNLYVLNLSNNKLIVID--GENNSSLVSYPSISFL-RLASC 516
Query: 25 REGSF 11
SF
Sbjct: 517 SISSF 521
>03_05_0501 - 24944533-24945507
Length = 324
Score = 31.1 bits (67), Expect = 0.36
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 116 CRTQQHIFVLGQGGFGGPRNSKNAVPVQDAPKRAPDAVLEQQTAEDQ-AALYRMSGDLNP 292
CR+Q+ GG GG + K V + AP++A + AED+ AA YR
Sbjct: 44 CRSQEE---QPDGGGGGGGDDKENVSPEVAPRKAKKMRVSLGAAEDEAAAYYRRPDPATA 100
Query: 293 LHIDPNVATA 322
DP++ A
Sbjct: 101 TLFDPDLLAA 110
>08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767
Length = 1041
Score = 29.9 bits (64), Expect = 0.84
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Frame = +2
Query: 140 VLGQGGFGGPRNSKNAVPVQDAPKR---------APDAVLEQQTAEDQAALYRMSGDLNP 292
V GG GG +++ + V P R PDAVL++ A +
Sbjct: 234 VASGGGGGGGDDARKVIDVMLKPTRRNPVLVGDAGPDAVLKEAIRRIPTAGFPALAGAKV 293
Query: 293 LHIDPNVATASGHKKPILHGLASLGFSARHVLAQYGG 403
L ++ +A +G K + + LG +L ++GG
Sbjct: 294 LPLEAELAKLAGDKAAMAARIGDLGAVVERLLGEHGG 330
>05_03_0376 -
13252220-13252354,13252433-13252541,13253279-13253337,
13253608-13253700,13254078-13254153,13254405-13254467,
13254535-13254629,13254743-13254845,13254930-13255024,
13255098-13255156,13255445-13255656,13256090-13256222,
13256691-13257081
Length = 540
Score = 29.5 bits (63), Expect = 1.1
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Frame = -1
Query: 252 SSAVCCSSTASGARLGASCTGTAFLLLRGPPKPPCPRTNMCCCVRQISCLFW---NTSLL 82
SS CC +ASG+ + +S + P + C ++S L W + LL
Sbjct: 273 SSISCCRFSASGSNVASSSVDGTVRIWTYDSSTPSSKNATIYCGSEVSALSWECRSDRLL 332
Query: 81 TMATALDPLSSISTT*HRVVKDPS 10
+ TA + + + RVV D S
Sbjct: 333 LIGTANGGIKAWNADAKRVVCDLS 356
>11_06_0179 + 20952070-20955228
Length = 1052
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 209 KRAPDAVLEQQTAEDQAALYRMSGDLNPLHIDPNV 313
K+A +++ Q+ + Q A SG P H DPNV
Sbjct: 358 KKANQSMMNQRKSSAQTANENASGRFKPDHADPNV 392
>01_06_0065 + 26107522-26107700,26110875-26111253
Length = 185
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 204 ASCTGTAFLLLRGPPKPPCPRTNMCC 127
++C +LLR PP P CP +CC
Sbjct: 6 SACLACCLVLLRHPPCP-CPAWRLCC 30
>03_02_0766 -
11003746-11003902,11004037-11004281,11004379-11004585,
11004699-11004861,11005105-11005370
Length = 345
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 5 GTEGSFTTRCYVVDILDKGSSAVAIVN--SEVFQNKQLICRTQQHIFVLGQG 154
G E F T +D + G++ IV+ S +++ K +I T+ IFV G G
Sbjct: 56 GPEDEFKTVQSAIDAVPVGNTEWVIVHLRSGIYREKVMIPETKPFIFVRGNG 107
>02_01_0037 +
261405-261779,261880-262065,262185-262271,262341-262420,
262518-262599,262794-262814,263204-263249,263365-263483,
263685-263798,263885-263959,264068-264157,264604-264713,
264902-265160
Length = 547
Score = 28.3 bits (60), Expect = 2.6
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 27 HDAMSSIYSTRGPVLSPL--LTARCSRTSSLFVAHNSTYLFWGRGVSVDRVIVRTLFPYR 200
H + I++ P L+P L ARC + V + LFWG V +D +V+ L P R
Sbjct: 344 HRQAAVIHADDLPSLAPQSRLRARCFPANDTDVGLSGNSLFWGGLVRID--VVKAL-P-R 399
Query: 201 TRLN-VRPMRCSNNKPPRT 254
TRL P + N P T
Sbjct: 400 TRLTFYGPKKLKINMVPTT 418
>01_06_0633 - 30741716-30742432
Length = 238
Score = 28.3 bits (60), Expect = 2.6
Identities = 25/86 (29%), Positives = 35/86 (40%)
Frame = +2
Query: 149 QGGFGGPRNSKNAVPVQDAPKRAPDAVLEQQTAEDQAALYRMSGDLNPLHIDPNVATASG 328
QGG GG + V APKR VL + D A + + H+ P +A+ S
Sbjct: 76 QGGGGGGDDDGGGGDVSGAPKRDAIPVLLRPRYVDSAQRITTTIPASKRHLLPRLASPSS 135
Query: 329 HKKPILHGLASLGFSARHVLAQYGGN 406
+ L A+ G+S VL N
Sbjct: 136 PRSS-LRVAAAPGWSPSSVLGLGASN 160
>10_05_0051 + 8576660-8576726,8579724-8579888,8579984-8581128
Length = 458
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 59 GSSAVAIVNSEVFQNKQLICRTQQHIFVLGQGGFG 163
GS + N ++F +L T+ + VLGQGGFG
Sbjct: 111 GSVLQKVENIKIFTKDELKKITKNNSEVLGQGGFG 145
>10_01_0299 - 3101028-3102022,3103004-3103177,3105272-3106190
Length = 695
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 59 GSSAVAIVNSEVFQNKQLICRTQQHIFVLGQGGFG 163
GS + N ++F +L T+ + VLGQGGFG
Sbjct: 398 GSVLQKVDNVKIFSKDELKKITKNNSEVLGQGGFG 432
>09_06_0127 + 21019266-21019670
Length = 134
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 252 SSAVCCSSTASGARLGASCTGTAFLLLRGPPKPPCP 145
SS +T S A G+S T ++ + PP PP P
Sbjct: 46 SSTSTTGTTPSAAASGSSSTASSSRSVNAPPPPPTP 81
>07_01_0983 + 8287866-8287871,8289353-8289583,8289647-8290408
Length = 332
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 59 GSSAVAIVNSEVFQNKQLICRTQQHIFVLGQGGFG 163
GS + N ++F +L T+ + VLGQGGFG
Sbjct: 13 GSILQKVDNVKIFSKDELKKITKNNSEVLGQGGFG 47
>11_01_0776 +
6476743-6477539,6478658-6479481,6479803-6480790,
6482633-6483545
Length = 1173
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 132 TYLFWGRGVSVDRVIVRTLFPYRTRLNVRPMRC 230
++LF+G G+SVDR + P+ R P C
Sbjct: 628 SFLFYGIGISVDRSRTASSLPFSVRTLELPSIC 660
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 261 AAWSSAVCCSSTASGARLGAS 199
A+WSSA+C S ARL AS
Sbjct: 316 ASWSSAICLPSPQPSARLEAS 336
>08_02_0937 + 22801526-22802461
Length = 311
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 122 TQQHIFVLGQGGFGGPRNSKNAVPVQDAPKRAPDAVL 232
TQ V G+GG GGP NS V + P DAV+
Sbjct: 265 TQLAQAVTGEGG-GGPANSTETVSSEWPPPSESDAVM 300
>07_01_0746 +
5714443-5714580,5715175-5715261,5715400-5715657,
5715765-5715929,5716106-5716159,5716318-5716464,
5716735-5717112
Length = 408
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 284 LNPLHIDPNVATASGHKKPILH 349
+NPL IDPN+ GH+ I +
Sbjct: 145 VNPLSIDPNMLNEGGHQHAIAY 166
>06_01_0219 + 1666921-1667120,1667418-1667466,1669432-1669626
Length = 147
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3
Query: 355 ESVQNRFLMTTRGRYVWIDM 296
E VQ RFL ++RGRYVW ++
Sbjct: 42 EHVQYRFL-SSRGRYVWFNI 60
>05_04_0328 -
20303330-20303440,20304123-20304942,20305170-20305368,
20305417-20305954
Length = 555
Score = 27.1 bits (57), Expect = 5.9
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +2
Query: 242 TAEDQAALYRMSGDLNPLHIDPNVATASGHKKPILHGLASLGFSARHVLA 391
TA D L G IDP V + H K +L G G + R V+A
Sbjct: 79 TAVDSKELVATDGATGTTIIDPRVCSKETHTKCLLFGSDVNGVTDRGVIA 128
>02_05_0459 +
29217728-29217919,29218095-29218190,29219785-29219895,
29219984-29220293,29220745-29220835,29220976-29221285,
29221469-29221617,29221914-29222418
Length = 587
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 264 RAAWSSAVCCSSTASGARLGASCTGTAFLLLRGPPKPP 151
R A ++AV +S AS A + + +G +F PP PP
Sbjct: 7 RTAAAAAVIAASAASLADVAYADSGYSFFRRSSPPPPP 44
>01_03_0113 - 12647599-12648052,12648078-12648319
Length = 231
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 303 SICSGLRSPDIL*RAAWSSAVCCSSTAS 220
++ + L PD++ RAAW+SA + AS
Sbjct: 15 TVFTALEIPDLICRAAWASAATAMAPAS 42
>10_08_0487 - 18253355-18253408,18255645-18257495
Length = 634
Score = 26.6 bits (56), Expect = 7.8
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +2
Query: 242 TAEDQAALYRMSGDLNPLHIDPNVATASGHKKPILHGLASLGFSARHVLA 391
TA D L G IDP V + H K +L G G + R V+A
Sbjct: 79 TAVDSKELVATDGATGTTIIDPRVCSKETHTKCLLFGPDVNGVTDRGVIA 128
>09_01_0180 + 2632507-2634870
Length = 787
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 15 DPSRHDAMSSIYSTRGPVLSPLLTARCSRTSS 110
DP DA+ ++ R +LSP +A S TS+
Sbjct: 163 DPDHQDAVDLVHRLRSRILSPSSSASGSATST 194
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 26.6 bits (56), Expect = 7.8
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -3
Query: 235 FEHRIGRTFRRVLYGNSVLTITRS-TETPLPQNKYVLLCATNKL 107
+ HRIGRT RR G + I ++ TET L K +L+ + +L
Sbjct: 508 YVHRIGRTGRRGKTGVATTFINKNQTETTLLDLKQLLIESKQRL 551
>06_03_0549 - 22016553-22016573,22016972-22017369,22018059-22018815
Length = 391
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 242 TAEDQAALYRMSGDLNPLHIDPNVATASGHKKPILHGLASLGFSARHVL 388
TA D L G +IDP V + H K +L G G + R V+
Sbjct: 79 TAMDSKELVATDGATGTTNIDPRVCSKETHTKCLLFGPDVNGVTDRGVI 127
>04_04_1385 -
33157557-33157655,33157752-33158201,33158864-33159004,
33159058-33159329,33160371-33160821
Length = 470
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/32 (34%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -1
Query: 150 CPRTNMCCCVRQIS--CLFWNTSLLTMATALD 61
CP + CCC+ + C W L AT D
Sbjct: 385 CPDSTTCCCIYEYGKYCYAWGCCPLEGATCCD 416
>04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072
Length = 414
Score = 26.6 bits (56), Expect = 7.8
Identities = 22/72 (30%), Positives = 29/72 (40%)
Frame = -1
Query: 366 PKEASPCRIGFL*PLAVATFGSICSGLRSPDIL*RAAWSSAVCCSSTASGARLGASCTGT 187
P PC G L V I L P+ L A + CC++ A+G + SCT
Sbjct: 19 PPATDPCSSGHWSDLPVDLLHRILHSLELPEALAVADVCKSWCCAAIAAG--VPRSCTP- 75
Query: 186 AFLLLRGPPKPP 151
L+ KPP
Sbjct: 76 --WLMSWSDKPP 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,614,312
Number of Sequences: 37544
Number of extensions: 352314
Number of successful extensions: 1176
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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