Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_N04
         (618 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   0.59 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   0.59 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   2.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   4.2  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   4.2  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   5.5  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +2

Query: 236 PWRH-LAATARRRFLYQSRQRQVPGEFRRATFHPGGDISED 355
           PW   L AT      YQ R    PG      ++P  +ISED
Sbjct: 85  PWHGVLNATVLPNSCYQERYEYFPGFPGEEMWNPNTNISED 125


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +2

Query: 236 PWRH-LAATARRRFLYQSRQRQVPGEFRRATFHPGGDISED 355
           PW   L AT      YQ R    PG      ++P  +ISED
Sbjct: 85  PWHGVLNATVLPNSCYQERYEYFPGFPGEEMWNPNTNISED 125


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 40  ERNQQGVLRNCFHRLK 87
           E+N++  LRNC  +LK
Sbjct: 57  EKNRRAHLRNCLEKLK 72


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -1

Query: 510 LLVHRLRTAVTQQSQEYSPRAGHSAA*TDVKCTRVGPSSPRVSLQRLCTR 361
           L +HR R +V   S   SPR+  S +   VK  ++  S    S + L T+
Sbjct: 305 LRIHRGRGSVHNGSNNGSPRSPESNSRCSVKREKIKISVSYPSTETLNTK 354


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 15/44 (34%), Positives = 18/44 (40%)
 Frame = +2

Query: 179 PEDLLNASIGPMVKNEYYRPWRHLAATARRRFLYQSRQRQVPGE 310
           P+   NAS+ P  K  Y   WR   A + R     SR    P E
Sbjct: 84  PKTSSNASVEPDSKVTYSGLWRVCVAISSRMEYECSRIDYFPNE 127


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 298 LSLSALIQEPTSGGGGEMTPRA 233
           +S+SAL+    S  GG++ P A
Sbjct: 392 VSMSALVSAVRSPAGGQLPPSA 413


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 222 TNTTARGVISPPPPDVGSCI 281
           T+TTA    +PP   VGS +
Sbjct: 44  TSTTAAATPTPPSVPVGSAV 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,159
Number of Sequences: 438
Number of extensions: 3022
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)