Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_M24
(626 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 24 1.1
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 24 1.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 1.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 2.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 5.6
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 5.6
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 22 5.6
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 22 5.6
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 9.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 9.8
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 457 WQLKFG*SNLLVVFFWRQL 513
W +FG + LL FFWR L
Sbjct: 25 WGTQFGQAPLLERFFWRTL 43
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.8 bits (49), Expect = 1.4
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +2
Query: 395 TVLNSDTKGHYYYPSSVNIGYGSSNLASPIY 487
T L D HY P+ +G+ + L P++
Sbjct: 198 TPLKEDHDDHYGVPTLEELGFDTEGLLPPVW 228
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 485 YSSFSSGDSLSPNYNEYQNQY 547
YS++++ ++ NYN Y N Y
Sbjct: 324 YSNYNNYNNNYNNYNNYNNNY 344
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 488 SSFSSGDSLSPNYNEYQNQYLT 553
+S S+ + + NYN Y N Y T
Sbjct: 86 NSLSNNYNYNNNYNNYNNNYNT 107
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 482 IYSSFSSGDSLSPNYNEYQNQYLT 553
I SS S+ S NYN Y N Y T
Sbjct: 81 IISSLSNNYKYS-NYNNYNNNYNT 103
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 482 IYSSFSSGDSLSPNYNEYQNQYLT 553
I SS S+ S NYN Y N Y T
Sbjct: 81 IISSLSNNYKYS-NYNNYNNNYNT 103
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 482 IYSSFSSGDSLSPNYNEYQNQYLT 553
I SS S+ S NYN Y N Y T
Sbjct: 81 IISSLSNNYKYS-NYNNYNNNYNT 103
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 482 IYSSFSSGDSLSPNYNEYQNQYLT 553
I SS S+ S NYN Y N Y T
Sbjct: 81 IISSLSNNYKYS-NYNNYNNNYNT 103
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 482 IYSSFSSGDSLSPNYNEYQNQYLT 553
I SS S+ S NYN Y N Y T
Sbjct: 81 IISSLSNNYKYS-NYNNYNNNYNT 103
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 482 IYSSFSSGDSLSPNYNEYQNQYLT 553
I SS S+ S NYN Y N Y T
Sbjct: 81 IISSLSNNYKYS-NYNNYNNNYNT 103
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 482 IYSSFSSGDSLSPNYNEYQNQYLT 553
I SS S+ S NYN Y N Y T
Sbjct: 81 IISSLSNNYKYS-NYNNYNNNYNT 103
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.8 bits (44), Expect = 5.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 508 VSRRKRRVNWTSQI*AAISDINT*WVVVMTFCITVENGL 392
+S +R W++ + AAIS++ VV+ C V L
Sbjct: 384 MSNNNQRTEWSATVKAAISEVQR--VVLGRLCEKVAKQL 420
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.8 bits (44), Expect = 5.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 508 VSRRKRRVNWTSQI*AAISDINT*WVVVMTFCITVENGL 392
+S +R W++ + AAIS++ VV+ C V L
Sbjct: 422 MSNNNQRTEWSATVKAAISEVQR--VVLGRLCEKVAKQL 458
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.8 bits (44), Expect = 5.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 334 TGST*SSLTYKASTRCWA 281
+G S + YK++ CWA
Sbjct: 244 SGRAKSEILYKSTLHCWA 261
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.8 bits (44), Expect = 5.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 334 TGST*SSLTYKASTRCWA 281
+G S + YK++ CWA
Sbjct: 244 SGRAKSEILYKSTLHCWA 261
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.0 bits (42), Expect = 9.8
Identities = 5/8 (62%), Positives = 5/8 (62%)
Frame = -3
Query: 594 CCWT*YCW 571
CCW CW
Sbjct: 488 CCWWKICW 495
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.0 bits (42), Expect = 9.8
Identities = 5/8 (62%), Positives = 5/8 (62%)
Frame = -3
Query: 594 CCWT*YCW 571
CCW CW
Sbjct: 541 CCWWKICW 548
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,386
Number of Sequences: 438
Number of extensions: 3112
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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