Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_M21
         (462 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    23   2.1  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    23   2.1  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    23   2.1  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    23   2.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   4.9  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   8.5  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    21   8.5  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    21   8.5  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    21   8.5  

>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 212 SYNKQYYSVSYV 247
           +YNK YY+++Y+
Sbjct: 105 NYNKLYYNINYI 116


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 212 SYNKQYYSVSYV 247
           +YNK YY+++Y+
Sbjct: 105 NYNKLYYNINYI 116


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 212 SYNKQYYSVSYV 247
           +YNK YY+++Y+
Sbjct: 105 NYNKLYYNINYI 116


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 212 SYNKQYYSVSYV 247
           +YNK YY+++Y+
Sbjct: 105 NYNKLYYNINYI 116


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 212 SYNKQYYSVSYV 247
           +YNK YY+++Y+
Sbjct: 105 NYNKLYYNINYI 116


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 212 SYNKQYYSVSYV 247
           +YNK YY+++Y+
Sbjct: 105 NYNKLYYNINYI 116


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 212 SYNKQYYSVSYV 247
           +YNK YY+++Y+
Sbjct: 105 NYNKLYYNINYI 116


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 212 SYNKQYYSVSYV 247
           +YNK YY+++Y+
Sbjct: 105 NYNKLYYNINYI 116


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 212 SYNKQYYSVSYV 247
           +YNK YY+++Y+
Sbjct: 105 NYNKLYYNINYI 116


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 212 SYNKQYYSVSYV 247
           +YNK YY+++Y+
Sbjct: 338 NYNKLYYNINYI 349


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 212 SYNKQYYSVSYV 247
           +YNK YY+++Y+
Sbjct: 338 NYNKLYYNINYI 349


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 57  VSLIENIHVLDSNTTQSSC 1
           V ++EN + +++NT  S C
Sbjct: 115 VGIVENQYAVENNTGSSLC 133


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 375 LVRVNCEVKLTLWIYTRVCFSIGLRLF 455
           ++RV+     T+ IY+R+ F I   LF
Sbjct: 351 MIRVHKTQSQTIDIYSRIGFPILFMLF 377


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 182 NDALSVL*IKSYNKQYYSVSYV 247
           N+    L   +Y K YY+++Y+
Sbjct: 93  NNNYKKLYCNNYKKLYYNINYI 114


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 182 NDALSVL*IKSYNKQYYSVSYV 247
           N+    L   +Y K YY+++Y+
Sbjct: 93  NNNYKKLYCNNYKKLYYNINYI 114


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 182 NDALSVL*IKSYNKQYYSVSYV 247
           N+    L   +Y K YY+++Y+
Sbjct: 93  NNNYKKLYCNNYRKLYYNINYI 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,046
Number of Sequences: 438
Number of extensions: 2670
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)