Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_M17
(395 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 31 0.006
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 28 0.045
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 2.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 2.9
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 2.9
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 20 9.0
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 20 9.0
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 20 9.0
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 20 9.0
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 20 9.0
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 20 9.0
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 30.7 bits (66), Expect = 0.006
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 89 RNLRPVLETDR*ESNSCRLTRNPTAQPTAPSSLS--VDYSTVRKFHNNFNSYVIKL 250
R R ET + E + R R + +P SSLS +YS ++NN+N+Y KL
Sbjct: 54 REYRKYRETSK-ERSRDRTERERSREPKIISSLSNNYNYSNYNNYNNNYNNYNKKL 108
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 27.9 bits (59), Expect = 0.045
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 89 RNLRPVLETDR*ESNSCRLTRNPTAQPTAPSSLSVDY--STVRKFHNNFNSY 238
R R ET + E + R R + +P SSLS +Y S ++NN+N+Y
Sbjct: 287 REYRKYGETSK-ERSRDRTERERSKEPKIISSLSNNYKYSNYNNYNNNYNNY 337
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 2.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 155 PTAQPTAPSSLSVDYSTVRKFHNNFN 232
PT T +S+S+D STV + N N
Sbjct: 730 PTNVATTVTSMSIDQSTVIQTGANVN 755
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 2.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 266 ISPISNLHQRNGLRPQH 316
ISP S +HQ L QH
Sbjct: 65 ISPASGIHQMQQLLQQH 81
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 2.9
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 308 PQHRHHHIPTRDL 346
P H HHH T+ L
Sbjct: 349 PPHHHHHHQTQSL 361
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 9.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 125 ESNSCRLTRNPTAQPTAPSSLSVDYSTVRKFHNNF 229
E + R R + +P SSLS +Y+ +NN+
Sbjct: 65 ERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNY 99
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 9.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 125 ESNSCRLTRNPTAQPTAPSSLSVDYSTVRKFHNNF 229
E + R R + +P SSLS +Y+ +NN+
Sbjct: 65 ERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNY 99
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 9.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 125 ESNSCRLTRNPTAQPTAPSSLSVDYSTVRKFHNNF 229
E + R R + +P SSLS +Y+ +NN+
Sbjct: 65 ERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNY 99
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 9.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 125 ESNSCRLTRNPTAQPTAPSSLSVDYSTVRKFHNNF 229
E + R R + +P SSLS +Y+ +NN+
Sbjct: 65 ERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNY 99
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 9.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 125 ESNSCRLTRNPTAQPTAPSSLSVDYSTVRKFHNNF 229
E + R R + +P SSLS +Y+ +NN+
Sbjct: 65 ERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNY 99
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 9.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 125 ESNSCRLTRNPTAQPTAPSSLSVDYSTVRKFHNNF 229
E + R R + +P SSLS +Y+ +NN+
Sbjct: 65 ERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNY 99
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,527
Number of Sequences: 438
Number of extensions: 2511
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9761793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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