Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_M16
         (588 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69391-1|CAA49188.1|  288|Homo sapiens ribosomal protein L6 prot...    66   9e-11
D17554-1|BAA04491.1|  288|Homo sapiens DNA-binding protein TAXRE...    66   9e-11
BC104826-1|AAI04827.1|  288|Homo sapiens ribosomal protein L6 pr...    66   9e-11
BC104824-1|AAI04825.1|  288|Homo sapiens ribosomal protein L6 pr...    66   9e-11
BC071912-1|AAH71912.1|  288|Homo sapiens ribosomal protein L6 pr...    66   9e-11
BC032299-1|AAH32299.1|  288|Homo sapiens ribosomal protein L6 pr...    66   9e-11
BC031009-1|AAH31009.1|  288|Homo sapiens ribosomal protein L6 pr...    66   9e-11
BC022444-1|AAH22444.1|  288|Homo sapiens ribosomal protein L6 pr...    66   9e-11
BC020679-1|AAH20679.1|  288|Homo sapiens ribosomal protein L6 pr...    66   9e-11
BC004138-1|AAH04138.1|  288|Homo sapiens ribosomal protein L6 pr...    66   9e-11
AF261087-1|AAF99680.1|  289|Homo sapiens DNA-binding protein TAX...    66   9e-11
AB042820-1|BAB17292.1|  288|Homo sapiens ribosomal protein L6 pr...    66   9e-11
S71022-1|AAB30819.1|  207|Homo sapiens neoplasm-related C140 pro...    44   4e-04

>X69391-1|CAA49188.1|  288|Homo sapiens ribosomal protein L6
           protein.
          Length = 288

 Score = 66.1 bits (154), Expect = 9e-11
 Identities = 39/89 (43%), Positives = 51/89 (57%)
 Frame = -2

Query: 533 KLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIR 354
           K+P HL DAYF              +GE IF T+KEKY  +EQRK DQK VD  ++  I+
Sbjct: 207 KIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262

Query: 353 LRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
             P    L+GYLR+ F L +  +PH+L F
Sbjct: 263 AIPQ---LQGYLRSVFALTNGIYPHKLVF 288


>D17554-1|BAA04491.1|  288|Homo sapiens DNA-binding protein
           TAXREB107 protein.
          Length = 288

 Score = 66.1 bits (154), Expect = 9e-11
 Identities = 39/89 (43%), Positives = 51/89 (57%)
 Frame = -2

Query: 533 KLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIR 354
           K+P HL DAYF              +GE IF T+KEKY  +EQRK DQK VD  ++  I+
Sbjct: 207 KIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262

Query: 353 LRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
             P    L+GYLR+ F L +  +PH+L F
Sbjct: 263 AIPQ---LQGYLRSVFALTNGIYPHKLVF 288


>BC104826-1|AAI04827.1|  288|Homo sapiens ribosomal protein L6
           protein.
          Length = 288

 Score = 66.1 bits (154), Expect = 9e-11
 Identities = 39/89 (43%), Positives = 51/89 (57%)
 Frame = -2

Query: 533 KLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIR 354
           K+P HL DAYF              +GE IF T+KEKY  +EQRK DQK VD  ++  I+
Sbjct: 207 KIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262

Query: 353 LRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
             P    L+GYLR+ F L +  +PH+L F
Sbjct: 263 AIPQ---LQGYLRSVFALTNGIYPHKLVF 288


>BC104824-1|AAI04825.1|  288|Homo sapiens ribosomal protein L6
           protein.
          Length = 288

 Score = 66.1 bits (154), Expect = 9e-11
 Identities = 39/89 (43%), Positives = 51/89 (57%)
 Frame = -2

Query: 533 KLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIR 354
           K+P HL DAYF              +GE IF T+KEKY  +EQRK DQK VD  ++  I+
Sbjct: 207 KIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262

Query: 353 LRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
             P    L+GYLR+ F L +  +PH+L F
Sbjct: 263 AIPQ---LQGYLRSVFALTNGIYPHKLVF 288


>BC071912-1|AAH71912.1|  288|Homo sapiens ribosomal protein L6
           protein.
          Length = 288

 Score = 66.1 bits (154), Expect = 9e-11
 Identities = 39/89 (43%), Positives = 51/89 (57%)
 Frame = -2

Query: 533 KLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIR 354
           K+P HL DAYF              +GE IF T+KEKY  +EQRK DQK VD  ++  I+
Sbjct: 207 KIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262

Query: 353 LRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
             P    L+GYLR+ F L +  +PH+L F
Sbjct: 263 AIPQ---LQGYLRSVFALTNGIYPHKLVF 288


>BC032299-1|AAH32299.1|  288|Homo sapiens ribosomal protein L6
           protein.
          Length = 288

 Score = 66.1 bits (154), Expect = 9e-11
 Identities = 39/89 (43%), Positives = 51/89 (57%)
 Frame = -2

Query: 533 KLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIR 354
           K+P HL DAYF              +GE IF T+KEKY  +EQRK DQK VD  ++  I+
Sbjct: 207 KIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262

Query: 353 LRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
             P    L+GYLR+ F L +  +PH+L F
Sbjct: 263 AIPQ---LQGYLRSVFALTNGIYPHKLVF 288


>BC031009-1|AAH31009.1|  288|Homo sapiens ribosomal protein L6
           protein.
          Length = 288

 Score = 66.1 bits (154), Expect = 9e-11
 Identities = 39/89 (43%), Positives = 51/89 (57%)
 Frame = -2

Query: 533 KLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIR 354
           K+P HL DAYF              +GE IF T+KEKY  +EQRK DQK VD  ++  I+
Sbjct: 207 KIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262

Query: 353 LRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
             P    L+GYLR+ F L +  +PH+L F
Sbjct: 263 AIPQ---LQGYLRSVFALTNGIYPHKLVF 288


>BC022444-1|AAH22444.1|  288|Homo sapiens ribosomal protein L6
           protein.
          Length = 288

 Score = 66.1 bits (154), Expect = 9e-11
 Identities = 39/89 (43%), Positives = 51/89 (57%)
 Frame = -2

Query: 533 KLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIR 354
           K+P HL DAYF              +GE IF T+KEKY  +EQRK DQK VD  ++  I+
Sbjct: 207 KIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262

Query: 353 LRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
             P    L+GYLR+ F L +  +PH+L F
Sbjct: 263 AIPQ---LQGYLRSVFALTNGIYPHKLVF 288


>BC020679-1|AAH20679.1|  288|Homo sapiens ribosomal protein L6
           protein.
          Length = 288

 Score = 66.1 bits (154), Expect = 9e-11
 Identities = 39/89 (43%), Positives = 51/89 (57%)
 Frame = -2

Query: 533 KLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIR 354
           K+P HL DAYF              +GE IF T+KEKY  +EQRK DQK VD  ++  I+
Sbjct: 207 KIPKHLTDAYFKKKKLRKPRRQ---EGE-IFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262

Query: 353 LRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
             P    L+GYLR+ F L +  +PH+L F
Sbjct: 263 AIPQ---LQGYLRSVFALTNGIYPHKLVF 288


>BC004138-1|AAH04138.1|  288|Homo sapiens ribosomal protein L6
           protein.
          Length = 288

 Score = 66.1 bits (154), Expect = 9e-11
 Identities = 39/89 (43%), Positives = 51/89 (57%)
 Frame = -2

Query: 533 KLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIR 354
           K+P HL DAYF              +GE IF T+KEKY  +EQRK DQK VD  ++  I+
Sbjct: 207 KIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262

Query: 353 LRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
             P    L+GYLR+ F L +  +PH+L F
Sbjct: 263 AIPQ---LQGYLRSVFALTNGIYPHKLVF 288


>AF261087-1|AAF99680.1|  289|Homo sapiens DNA-binding protein
           TAXREB107 protein.
          Length = 289

 Score = 66.1 bits (154), Expect = 9e-11
 Identities = 39/89 (43%), Positives = 51/89 (57%)
 Frame = -2

Query: 533 KLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIR 354
           K+P HL DAYF              +GE IF T+KEKY  +EQRK DQK VD  ++  I+
Sbjct: 208 KIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQKAVDSQILPKIK 263

Query: 353 LRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
             P    L+GYLR+ F L +  +PH+L F
Sbjct: 264 AIPQ---LQGYLRSVFALTNGIYPHKLVF 289


>AB042820-1|BAB17292.1|  288|Homo sapiens ribosomal protein L6
           protein.
          Length = 288

 Score = 66.1 bits (154), Expect = 9e-11
 Identities = 39/89 (43%), Positives = 51/89 (57%)
 Frame = -2

Query: 533 KLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPSEQRKADQKLVDEAVIKAIR 354
           K+P HL DAYF              +GE IF T+KEKY  +EQRK DQK VD  ++  I+
Sbjct: 207 KIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQKAVDSQILPKIK 262

Query: 353 LRPDKKTLRGYLRASFGLRSSQFPHRLRF 267
             P    L+GYLR+ F L +  +PH+L F
Sbjct: 263 AIPQ---LQGYLRSVFALTNGIYPHKLVF 288


>S71022-1|AAB30819.1|  207|Homo sapiens neoplasm-related C140
           product protein.
          Length = 207

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 27/53 (50%), Positives = 31/53 (58%)
 Frame = -2

Query: 542 AISKLPAHLDDAYFXXXXXXXXXXXXXKQGEDIFATKKEKYVPSEQRKADQKL 384
           AI K+P HL DAYF              +GE IF T+KEKY  +EQRK DQKL
Sbjct: 143 AIVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEKYEITEQRKIDQKL 191


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,678,084
Number of Sequences: 237096
Number of extensions: 797260
Number of successful extensions: 1886
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1860
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)