Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_M14
         (612 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   182   3e-48
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    22   5.4  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    22   5.4  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    22   5.4  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    22   5.4  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    22   5.4  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    22   5.4  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    22   5.4  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    22   5.4  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   5.4  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   7.2  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   7.2  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   7.2  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  182 bits (442), Expect = 3e-48
 Identities = 87/112 (77%), Positives = 97/112 (86%)
 Frame = -3

Query: 610 RLVTAVNDIEKRIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEIASKY 431
           RLV AVN+IEKR+ FSH+DRLGFLTFCPTNLGTTVRASVHI           LEEIA K+
Sbjct: 244 RLVHAVNEIEKRLLFSHNDRLGFLTFCPTNLGTTVRASVHIKLPKLAANRAKLEEIAGKF 303

Query: 430 HLQVRGTRGEHTEAEGGVYDISNKRRMGLTEYEAVKEMYDGIAELIKIEKSL 275
           +LQVRGTRGEHTEAEGG+YDISNKRR+GLTEY+AVKEM+DGIAELIK+EK L
Sbjct: 304 NLQVRGTRGEHTEAEGGIYDISNKRRLGLTEYQAVKEMHDGIAELIKLEKEL 355


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 608 ARDRRQRHREEDP 570
           +RDRR+R R ++P
Sbjct: 67  SRDRRERERSKEP 79


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 608 ARDRRQRHREEDP 570
           +RDRR+R R ++P
Sbjct: 67  SRDRRERERSKEP 79


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 608 ARDRRQRHREEDP 570
           +RDRR+R R ++P
Sbjct: 67  SRDRRERERSKEP 79


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 608 ARDRRQRHREEDP 570
           +RDRR+R R ++P
Sbjct: 67  SRDRRERERSKEP 79


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 608 ARDRRQRHREEDP 570
           +RDRR+R R ++P
Sbjct: 67  SRDRRERERSKEP 79


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 608 ARDRRQRHREEDP 570
           +RDRR+R R ++P
Sbjct: 67  SRDRRERERSKEP 79


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 608 ARDRRQRHREEDP 570
           +RDRR+R R ++P
Sbjct: 67  SRDRRERERSKEP 79


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 608 ARDRRQRHREEDP 570
           +RDRR+R R ++P
Sbjct: 67  SRDRRERERSKEP 79


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 608 ARDRRQRHREEDP 570
           +RDRR+R R ++P
Sbjct: 289 SRDRRERERSKEP 301


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 364 NKRRMGLTEYEAVKEMYDGIAELIKIEKSL*VVSRS 257
           N  +   ++Y+     Y+G+  ++  + S  VVS+S
Sbjct: 279 NTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSKS 314


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 364 NKRRMGLTEYEAVKEMYDGIAELIKIEKSL*VVSRS 257
           N  +   ++Y+     Y+G+  ++  + S  VVS+S
Sbjct: 279 NTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSKS 314


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 364 NKRRMGLTEYEAVKEMYDGIAELIKIEKSL*VVSRS 257
           N  +   ++Y+     Y+G+  ++  + S  VVS+S
Sbjct: 279 NTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSKS 314


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,497
Number of Sequences: 438
Number of extensions: 2911
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)