BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_M12
(518 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1695 + 39251266-39252390,39252852-39252983,39253560-392537... 74 6e-14
01_06_1694 + 39246262-39247320,39247464-39247590,39248638-392487... 74 6e-14
03_01_0228 + 1802038-1803265,1804207-1804245,1804638-1804783,180... 72 2e-13
07_03_1438 - 26552160-26552291,26552430-26552535,26552772-26553283 69 3e-12
02_01_0577 + 4280590-4281225,4281749-4282102,4282214-4282412,428... 65 3e-11
02_05_0403 - 28696043-28696153,28696245-28696347,28696443-286965... 65 4e-11
06_03_0983 - 26559772-26559915,26560149-26560251,26560335-265605... 63 1e-10
04_03_0305 - 14125193-14125421,14125666-14127104 62 2e-10
03_01_0369 - 2863159-2863491,2864149-2864214,2865045-2865140,286... 62 3e-10
10_08_1051 - 22562840-22562971,22563474-22563576,22563701-225637... 61 5e-10
08_02_0851 - 21866088-21866210,21866311-21866413,21866531-218667... 61 5e-10
08_01_0900 + 8867895-8868938,8869887-8870085,8871500-8871713,887... 60 1e-09
08_01_0294 + 2376552-2376935,2377359-2377548,2377782-2377921,237... 59 2e-09
04_04_1635 - 34943881-34945233,34945321-34945524 51 5e-07
09_06_0236 - 21781508-21783043,21783307-21783504 48 6e-06
02_01_0140 + 1014594-1016048 46 1e-05
03_01_0213 + 1685862-1686059,1686194-1687732 44 7e-05
08_01_0214 - 1710317-1710443,1710839-1711047,1711161-1711420,171... 43 1e-04
04_04_1568 - 34475707-34476822,34476894-34477083,34477330-344774... 43 1e-04
01_03_0181 + 13523172-13524641 43 1e-04
03_02_0732 - 10794173-10795069,10795301-10795891,10797032-10797268 43 2e-04
03_01_0240 - 1862699-1864186,1864245-1864442 43 2e-04
05_01_0243 - 1806770-1806832,1806942-1807061,1807275-1807457,180... 42 3e-04
03_02_0731 - 10786122-10787018,10787859-10788449,10788659-107887... 42 4e-04
03_01_0241 - 1866625-1868082,1868892-1869080 41 5e-04
01_06_0271 - 28055367-28055402,28055503-28055622,28055710-280558... 38 0.005
01_06_0790 + 32019972-32020101,32020461-32020657,32020790-320209... 38 0.006
11_06_0086 + 19914234-19914382,19914590-19914653,19914793-199148... 35 0.034
01_06_0120 + 26622285-26622433,26623156-26623219,26623310-266233... 35 0.034
12_01_0288 - 2160981-2161076,2161150-2161236,2161333-2161419,216... 34 0.060
11_01_0439 + 3353516-3353962,3354403-3354483,3354675-3354947,335... 34 0.060
06_01_0081 + 646100-646346,646432-646848,647067-647170,648152-64... 34 0.060
11_01_0285 - 2115051-2115146,2115220-2115306,2115417-2115503,211... 33 0.10
09_06_0313 + 22240971-22242176 33 0.10
05_03_0481 + 14556223-14556762,14556848-14556928,14559532-145597... 33 0.10
12_01_0441 + 3484003-3484374,3485071-3485151,3485242-3485514,348... 33 0.14
02_04_0049 + 19238794-19239003,19239359-19239505,19239595-192397... 33 0.18
05_01_0146 - 953957-956278,956468-956786,957185-957213 31 0.42
03_03_0217 + 15500943-15502196 31 0.42
04_03_1017 + 21747044-21748051 31 0.55
03_05_0705 - 26965352-26965542,26965732-26965763,26966141-269662... 31 0.55
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 31 0.55
02_04_0166 - 20508656-20509092,20509282-20509372 31 0.73
06_03_0322 - 19560242-19560671,19560833-19561122 30 0.97
05_04_0422 + 21122099-21122194,21122353-21122510,21122651-211228... 30 0.97
05_04_0210 + 19082778-19082940,19083806-19083875,19084172-190842... 30 0.97
03_06_0065 - 31399791-31399874,31399956-31400165,31400407-314005... 30 0.97
10_04_0003 + 7382881-7383285,7383455-7383631,7383661-7383978 30 1.3
08_02_0550 + 18509365-18509589,18509668-18510644,18510828-185118... 29 1.7
07_01_0516 - 3850252-3852870 29 1.7
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 29 1.7
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 29 1.7
01_03_0241 - 14111286-14111935,14111992-14112115 29 1.7
05_03_0036 + 7605138-7605445,7605718-7605805,7606355-7606408,760... 29 2.2
03_06_0191 - 32228642-32228949,32229028-32230567 29 2.2
03_02_0909 - 12310460-12310759,12310882-12310989,12311099-123112... 29 2.2
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 29 2.2
12_01_0880 - 8447941-8447981,8448928-8449261 29 3.0
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 29 3.0
09_04_0521 - 18297343-18297840 29 3.0
08_02_0592 + 19064025-19066596,19067036-19067084,19068530-190686... 29 3.0
07_03_1507 - 27228032-27228742 29 3.0
03_04_0071 + 17048222-17048227,17048348-17048601,17048679-17048940 29 3.0
02_05_0566 - 30017031-30017309,30018077-30018172,30018261-300183... 29 3.0
01_06_1740 - 39575614-39576981 29 3.0
01_01_0595 - 4430738-4430785,4430904-4432679 29 3.0
10_02_0056 - 4656268-4656804 28 3.9
06_01_0576 - 4073261-4073821,4073891-4074145 28 3.9
03_02_0144 + 5910246-5910734 28 3.9
12_02_0529 - 20067974-20068588,20069982-20070048,20070156-200702... 28 5.2
07_01_1021 + 8736032-8736106,8736336-8736374,8737362-8737493,873... 28 5.2
05_06_0097 + 25548272-25548664 28 5.2
02_02_0431 - 10152228-10152352,10152688-10152919,10153602-101538... 28 5.2
01_07_0132 - 41298184-41298558,41298648-41298729,41298850-412989... 28 5.2
01_01_0144 - 1316626-1316658,1317580-1318863 28 5.2
12_02_1174 - 26696869-26698191 27 6.8
11_04_0319 - 16348349-16348591,16348818-16349066,16349827-16349832 27 6.8
09_06_0006 + 20149326-20149646,20149750-20149824 27 6.8
09_04_0250 + 16074966-16075418 27 6.8
08_02_0526 + 18184146-18184168,18184247-18184438,18184846-181849... 27 6.8
05_02_0155 + 7146999-7147276,7147447-7147492,7148153-7148284 27 6.8
04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414 27 6.8
03_06_0628 - 35179951-35180265,35180653-35180889,35180982-351811... 27 6.8
03_06_0277 + 32814621-32814996,32815419-32815558,32816074-32816160 27 6.8
02_05_0331 + 28003454-28003912,28004649-28004873,28005017-280053... 27 6.8
02_03_0181 + 16100495-16101025,16101335-16101358 27 6.8
02_01_0448 + 3227721-3228968 27 6.8
01_06_1074 + 34318685-34319314,34319429-34319546,34319662-343198... 27 6.8
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 23 7.3
10_01_0088 + 1087807-1088282,1088752-1088974 27 9.0
08_02_1481 - 27413397-27413414,27413738-27414367,27414471-27415484 27 9.0
08_02_0797 + 21307534-21307639,21307907-21308988,21309385-213094... 27 9.0
07_01_0776 + 5983684-5983857,5983962-5984072,5984151-5984302,598... 27 9.0
06_03_0022 - 15536811-15536899,15537485-15537664,15537706-155379... 27 9.0
06_01_0368 + 2645007-2645317,2645422-2645509,2648927-2649183,264... 27 9.0
05_06_0038 - 25100851-25101474,25101945-25102058,25102151-251024... 27 9.0
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 27 9.0
04_03_1022 - 21778315-21779007 27 9.0
02_02_0580 + 11757667-11758258,11758419-11758572,11758682-117587... 27 9.0
>01_06_1695 +
39251266-39252390,39252852-39252983,39253560-39253748,
39253887-39253954,39254080-39254182,39254387-39254509
Length = 579
Score = 74.1 bits (174), Expect = 6e-14
Identities = 34/57 (59%), Positives = 41/57 (71%)
Frame = +3
Query: 348 TRDGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
T DGW +TGD+ NE G + VVDRLKELIK K VPPAELE++L+ P + DAAV
Sbjct: 447 TPDGWLKTGDLCYFNEDGYLYVVDRLKELIKYKGYQVPPAELEHILQSRPEIADAAV 503
>01_06_1694 +
39246262-39247320,39247464-39247590,39248638-39248783,
39248898-39248965,39249055-39249157,39249616-39249741
Length = 542
Score = 74.1 bits (174), Expect = 6e-14
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = +3
Query: 354 DGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
+GW +TGD+ NE G + +VDRLKELIK K VPPAELE++L+ HP + DAAV
Sbjct: 411 EGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAELEHILQSHPGIADAAV 465
>03_01_0228 +
1802038-1803265,1804207-1804245,1804638-1804783,
1804891-1804958,1805045-1805147,1805287-1805400
Length = 565
Score = 72.1 bits (169), Expect = 2e-13
Identities = 34/57 (59%), Positives = 40/57 (70%)
Frame = +3
Query: 348 TRDGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
T DGW +TGD+ ++E G + VVDRLKELIK K VPPAELE +L HP V D AV
Sbjct: 436 TPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHPEVTDVAV 492
>07_03_1438 - 26552160-26552291,26552430-26552535,26552772-26553283
Length = 249
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/73 (47%), Positives = 42/73 (57%)
Frame = +3
Query: 300 TCAVCVRGGGPSCRIGTRDGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELEN 479
T V G G + W RTGD+ V+ GL+ VVDR+KELIK V PAELE+
Sbjct: 97 TALALVAAAGSVSVSGGGERWLRTGDLCYVDSRGLVYVVDRVKELIKCNAYQVAPAELED 156
Query: 480 VLKEHPYVFDAAV 518
VL HP + DAAV
Sbjct: 157 VLATHPDIHDAAV 169
>02_01_0577 +
4280590-4281225,4281749-4282102,4282214-4282412,
4284991-4285204,4285299-4285401,4285481-4285639
Length = 554
Score = 65.3 bits (152), Expect = 3e-11
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = +3
Query: 354 DGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
DGW TGD+ V++ I +VDRLKE+IK K VPPAELE +L HP + DAAV
Sbjct: 412 DGWLHTGDIGFVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAV 466
>02_05_0403 -
28696043-28696153,28696245-28696347,28696443-28696510,
28696582-28696727,28698038-28699124
Length = 504
Score = 64.9 bits (151), Expect = 4e-11
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +3
Query: 354 DGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
+GW TGD+ V++ + +VDR+KELIK K VPPAELE++L HP + DAAV
Sbjct: 378 EGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQVPPAELESLLIAHPSIADAAV 432
>06_03_0983 -
26559772-26559915,26560149-26560251,26560335-26560548,
26563352-26563550,26564509-26564862,26565430-26566086
Length = 556
Score = 63.3 bits (147), Expect = 1e-10
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +3
Query: 351 RDGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
+ GW TGD+ V++ I +VDRLKE+IK K VPPAELE +L HP + DAAV
Sbjct: 418 KGGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPDIKDAAV 473
>04_03_0305 - 14125193-14125421,14125666-14127104
Length = 555
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = +3
Query: 357 GWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
GW TGD+ ++ G + +VDR+KELIK K V PAELE VL HP V DAAV
Sbjct: 425 GWLHTGDVGYIDGDGDVFIVDRIKELIKYKGFQVAPAELEAVLLSHPSVEDAAV 478
>03_01_0369 -
2863159-2863491,2864149-2864214,2865045-2865140,
2865530-2865632,2865771-2865838,2866570-2866712,
2867050-2867242,2867602-2867640,2867742-2867807,
2868617-2869651
Length = 713
Score = 62.1 bits (144), Expect = 3e-10
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +3
Query: 351 RDGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
+ GW TGD+ + G + VVDRLKELIK K + PAELE +L HP + DA V
Sbjct: 458 KQGWLHTGDLGYFDGGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVV 513
>10_08_1051 -
22562840-22562971,22563474-22563576,22563701-22563768,
22563896-22564053,22564706-22564895,22565162-22566205
Length = 564
Score = 61.3 bits (142), Expect = 5e-10
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +3
Query: 351 RDGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
+DGW RTGD+A + G + +V RLK+ IK K + PA+LE VL HP + D AV
Sbjct: 430 KDGWLRTGDIAYFDSDGYLFIVGRLKDTIKYKGFQIAPADLEAVLIRHPEIIDVAV 485
>08_02_0851 -
21866088-21866210,21866311-21866413,21866531-21866744,
21866877-21867075,21867171-21868151
Length = 539
Score = 61.3 bits (142), Expect = 5e-10
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = +3
Query: 351 RDGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
+DGW TGD+ V++ I +VDRLKELIK K V PAELE +L H V DAAV
Sbjct: 408 KDGWLHTGDIGFVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHAAVADAAV 463
>08_01_0900 +
8867895-8868938,8869887-8870085,8871500-8871713,
8871854-8871959,8872077-8872199
Length = 561
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +3
Query: 354 DGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
+GW TGD+ V++ I +VDRLKE+IK + V PAELE +L HP + DAAV
Sbjct: 430 EGWLHTGDIGYVDDDDEIFIVDRLKEIIKYRGFQVAPAELEALLITHPSIADAAV 484
>08_01_0294 +
2376552-2376935,2377359-2377548,2377782-2377921,
2378101-2378168,2378289-2378391,2378668-2378817
Length = 344
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = +3
Query: 351 RDGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
+DGW RTGD+A + G + +V RLK+ IK K + P +LE VL HP + D AV
Sbjct: 204 KDGWLRTGDIAYFDLDGYLYIVGRLKDTIKYKGFQIAPGDLEEVLIHHPEILDVAV 259
>04_04_1635 - 34943881-34945233,34945321-34945524
Length = 518
Score = 51.2 bits (117), Expect = 5e-07
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Frame = +3
Query: 279 RRGCGARTCAVCVRG--------GGPSCRIGT-RDGWFRTGDMAKVNESGLITVVDRLKE 431
RR ++ VCVRG G P R GWF TGD+ V+E G + +V R+KE
Sbjct: 352 RRVEAGKSGEVCVRGANVTSGYKGNPEANEAAFRFGWFHTGDIGVVDEEGYLRLVGRIKE 411
Query: 432 LIKVKVLPVPPAELENVLKEHPYVFDA 512
LI + P E+++VL HP + A
Sbjct: 412 LINRGGEKISPIEVDSVLLGHPAIAQA 438
>09_06_0236 - 21781508-21783043,21783307-21783504
Length = 577
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +3
Query: 351 RDGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
RDGWF TGD+ V+ G + + DR K++I + E+E L +HP V +AAV
Sbjct: 420 RDGWFLTGDVGVVHPDGYVEIKDRSKDVIISGGENISSVEVEAALYQHPAVREAAV 475
>02_01_0140 + 1014594-1016048
Length = 484
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +3
Query: 357 GWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
GWFR+GD+A +E G + V+DR K++I + E+E L HP V +AAV
Sbjct: 336 GWFRSGDLAVRHEDGYVKVLDRSKDIIISGGENISTIEVEAALFSHPAVEEAAV 389
>03_01_0213 + 1685862-1686059,1686194-1687732
Length = 578
Score = 44.0 bits (99), Expect = 7e-05
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 360 WFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
WF TGD+ V+ G I + DR K++I + E+E VL +HP V DAAV
Sbjct: 416 WFLTGDVGVVHADGYIEIKDRSKDVIISGGENICSKEVEEVLFQHPAVADAAV 468
>08_01_0214 -
1710317-1710443,1710839-1711047,1711161-1711420,
1711442-1711534,1711745-1711872,1711958-1712151,
1712288-1712385,1712548-1712658,1712782-1712950,
1713109-1713181,1713311-1713507
Length = 552
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +3
Query: 351 RDGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
R+GW TGD+ V+++G + ++ R K IK V P E+E+VL +HP + A V
Sbjct: 402 RNGWLDTGDIGWVDKTGNLWLMGRQKGRIKTGGENVYPEEVESVLSQHPGLAKAVV 457
>04_04_1568 -
34475707-34476822,34476894-34477083,34477330-34477464,
34477571-34477668,34477789-34477979,34478784-34479286,
34480169-34481568,34481655-34481855
Length = 1277
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +3
Query: 354 DGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
+GWF TGD+ ++ G + + DR K++I + E+E+VL HP V +AAV
Sbjct: 417 NGWFYTGDVGVMHPDGYVEIRDRSKDVIISGGENISSVEVESVLYGHPAVNEAAV 471
>01_03_0181 + 13523172-13524641
Length = 489
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +3
Query: 357 GWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
GW R+GD+A E G I ++DR K++I + E+E L HP V +AAV
Sbjct: 331 GWLRSGDLAVREEDGYIKILDRSKDIIISGGENISTVEVEAALFGHPAVEEAAV 384
>03_02_0732 - 10794173-10795069,10795301-10795891,10797032-10797268
Length = 574
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 357 GWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
GW+ +GD+ + G I V DR+K++I + E+E VL HP V +A+V
Sbjct: 437 GWYHSGDLGVKHPDGYIEVKDRMKDIIISGGENISSLEVEKVLYAHPAVLEASV 490
>03_01_0240 - 1862699-1864186,1864245-1864442
Length = 561
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +3
Query: 351 RDGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
R GW RTGD+ + G I + DR K++I + E+E+VL H V DAAV
Sbjct: 424 RGGWLRTGDLGVRHPDGYIQLKDRAKDIIISGGENISSIEVESVLFGHHAVLDAAV 479
>05_01_0243 -
1806770-1806832,1806942-1807061,1807275-1807457,
1807554-1807693,1807768-1808010,1808664-1808781,
1808902-1808977,1809054-1809120,1809201-1809288,
1809381-1809491,1809632-1809799,1809946-1810040,
1810123-1810162,1810242-1810318,1810607-1810655,
1810756-1810812,1810959-1811048,1811160-1811223,
1812085-1812245
Length = 669
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 354 DGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAE-LENVLKEHPYVFDAAV 518
DGWF TGD+ ++N G++ V+DR K + K+ E LE V P V D V
Sbjct: 496 DGWFHTGDIGEMNSDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYVFPPTVEDVWV 551
>03_02_0731 -
10786122-10787018,10787859-10788449,10788659-10788740,
10789914-10790107
Length = 587
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 354 DGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
+GWF +GD+ + G I V DR K++I + E+E + +HP V +A+V
Sbjct: 449 NGWFHSGDLGVKHTDGYIEVKDRAKDIIISGGENISSLEVEKAVYQHPAVLEASV 503
>03_01_0241 - 1866625-1868082,1868892-1869080
Length = 548
Score = 41.1 bits (92), Expect = 5e-04
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 357 GWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
GW +GD+A + G I + DR K++I + E+E+V+ HP V +AAV
Sbjct: 413 GWLHSGDLAVRHPDGYIQLKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAV 466
>01_06_0271 -
28055367-28055402,28055503-28055622,28055710-28055892,
28056006-28056145,28056347-28056595,28056706-28056823,
28056924-28056999,28057096-28057162,28057282-28057369,
28057506-28057616,28058127-28058221,28058305-28058344,
28058736-28058812,28058978-28059026,28059464-28059520,
28059624-28059713,28059833-28059896,28060076-28060245
Length = 609
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 354 DGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAE-LENVLKEHPYV 503
DGWF TGD+ + G + ++DR K + K+ E LEN+ + P V
Sbjct: 445 DGWFHTGDIGEWQSDGSMKIIDRKKNIFKLSQGEYVAVENLENIFGQAPGV 495
>01_06_0790 +
32019972-32020101,32020461-32020657,32020790-32020993,
32021444-32021645,32021798-32021886,32022567-32022662,
32022710-32022814,32023516-32023556,32023685-32023777,
32023853-32023970,32024488-32024578,32024693-32024766,
32025008-32025187,32025643-32025681
Length = 552
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 357 GWFRTGDMAKVNESGLITVVDRLK-ELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
G+F+TGD V++ G ++ R +++KV + E+E+VL +H V + AV
Sbjct: 435 GFFKTGDTVTVDDEGYFIILGRTNADIMKVGGYKLSALEIESVLLQHEIVLECAV 489
>11_06_0086 +
19914234-19914382,19914590-19914653,19914793-19914882,
19915000-19915056,19915147-19915195,19915393-19915469,
19915686-19915725,19915813-19915907,19916007-19916171,
19916317-19916427,19916515-19916602,19916691-19916757,
19916822-19916939,19917022-19917139,19917398-19917643,
19917736-19917833,19917961-19918143,19918237-19918356,
19918515-19918565
Length = 661
Score = 35.1 bits (77), Expect = 0.034
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 354 DGWFRTGDMAKVNESGLITVVDRLKELIKV 443
DGWF TGD+ + G + ++DR K + K+
Sbjct: 506 DGWFHTGDIGEWQPDGTMKIIDRKKNIFKL 535
>01_06_0120 +
26622285-26622433,26623156-26623219,26623310-26623399,
26623588-26623644,26623832-26623880,26624320-26624396,
26624918-26624957,26625037-26625131,26625525-26625689,
26625777-26625887,26625971-26626058,26626715-26626781,
26626955-26627063,26627155-26627272,26628345-26628590,
26628956-26629095,26629262-26629444,26629560-26629679,
26629932-26629967
Length = 667
Score = 35.1 bits (77), Expect = 0.034
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 354 DGWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAE-LENV 482
DGWF TGD+ + G + ++DR K + K+ E LEN+
Sbjct: 503 DGWFHTGDIGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLENI 546
>12_01_0288 -
2160981-2161076,2161150-2161236,2161333-2161419,
2161641-2161726,2161805-2161908,2162618-2162704,
2162790-2162913,2163058-2163176,2163268-2163397,
2163583-2163671,2163804-2163892,2164579-2164672,
2164778-2164857,2164952-2165041,2166307-2166393,
2166495-2166539,2166966-2167042,2167120-2167225,
2167383-2167464,2167553-2167624,2168106-2168183,
2168259-2168349,2168826-2168979
Length = 717
Score = 34.3 bits (75), Expect = 0.060
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Frame = +3
Query: 309 VCVRGGGPSC-----RIGTR-----DGWFRTGDMAKVNESGLITVVDRLKELIKV-KVLP 455
+CVRG C I TR DGW TGD+ G + ++DR K + K+ +
Sbjct: 518 ICVRGPTIFCGYYKDEIQTREAVDEDGWLHTGDIGLWMPGGRLKIIDRKKNIFKLAQGEY 577
Query: 456 VPPAELENVLKEHPYV 503
+ P ++ENV + ++
Sbjct: 578 IAPEKIENVYAKCKFI 593
>11_01_0439 +
3353516-3353962,3354403-3354483,3354675-3354947,
3355081-3355212,3355303-3355476,3355568-3355702,
3355746-3355797,3355954-3356093,3356574-3356705,
3356787-3356921,3356995-3357201,3357779-3357943
Length = 690
Score = 34.3 bits (75), Expect = 0.060
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 360 WFRTGDMAKVNESGLITVVDRLKELIKVKVLP-VPPAELENVLKEHPYV 503
WF +GD+ +++ G + ++DR K+++K++ V ++E L PYV
Sbjct: 530 WFYSGDIGRLHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVCPYV 578
>06_01_0081 +
646100-646346,646432-646848,647067-647170,648152-648352,
649088-649798,649944-650674,650942-651017,651096-651182,
651429-651517,651917-651973,652402-652510,652590-652649,
652835-652919,653178-653242,653694-653753,653869-653913,
654697-654800,654877-655099
Length = 1156
Score = 34.3 bits (75), Expect = 0.060
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 360 WFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
++RTGD A+ +SG + R +K+ E+E+ L EHP V AAV
Sbjct: 402 YYRTGDFARRLKSGEFIFLGRKDRTVKIYGQRFSLQEVESTLNEHPDVSAAAV 454
>11_01_0285 -
2115051-2115146,2115220-2115306,2115417-2115503,
2115724-2115809,2115889-2115992,2117447-2117533,
2117621-2117744,2118420-2118538,2118626-2118755,
2118902-2118990,2119122-2119210,2119985-2120078,
2120187-2120266,2120363-2120452,2121195-2121281,
2121381-2121425,2121847-2121923,2121997-2122102,
2122258-2122339,2122430-2122501,2122502-2122585,
2123007-2123084,2123155-2123224,2123737-2123851
Length = 725
Score = 33.5 bits (73), Expect = 0.10
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 354 DGWFRTGDMAKVNESGLITVVDRLKELIKV-KVLPVPPAELENVLKEHPYV 503
DGW TGD+ G + ++DR K + K+ + + P ++ENV + ++
Sbjct: 551 DGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFI 601
>09_06_0313 + 22240971-22242176
Length = 401
Score = 33.5 bits (73), Expect = 0.10
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 330 AHRPAHIPRTYEPRIRAA-PCCRSALYTTLPASRRVPRV 217
A RPAHIPR+ R A P R+ + T A RRVPRV
Sbjct: 6 ALRPAHIPRSTAVRPPCATPFSRAHWHATCAAIRRVPRV 44
>05_03_0481 +
14556223-14556762,14556848-14556928,14559532-14559798,
14559933-14559992,14560811-14560942,14561026-14561199,
14562769-14562919,14563651-14563790,14565656-14565787,
14565866-14566000,14566098-14566304,14567376-14567540
Length = 727
Score = 33.5 bits (73), Expect = 0.10
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 360 WFRTGDMAKVNESGLITVVDRLKELIKVK 446
WF TGD+ + + G + ++DR K+++K++
Sbjct: 567 WFYTGDIGQFHPDGCLEIIDRKKDIVKLQ 595
>12_01_0441 +
3484003-3484374,3485071-3485151,3485242-3485514,
3485695-3485826,3485903-3486076,3486164-3486393,
3486562-3486679,3486717-3486743,3486948-3487079,
3487189-3487323,3487393-3487599,3487772-3487936
Length = 681
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 360 WFRTGDMAKVNESGLITVVDRLKELIKVKVLP-VPPAELENVLKEHPYV 503
WF +GD+ + + G + ++DR K+++K++ V ++E L PYV
Sbjct: 521 WFYSGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPYV 569
>02_04_0049 +
19238794-19239003,19239359-19239505,19239595-19239750,
19239870-19239992,19240073-19240241,19240700-19240782,
19240917-19241018,19241104-19241192,19241317-19241407,
19241734-19241847,19242371-19242447,19242534-19242612,
19242710-19242778,19243022-19243197,19243309-19243365,
19243460-19243550,19243644-19243742,19243878-19244063
Length = 705
Score = 32.7 bits (71), Expect = 0.18
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 357 GWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHPYVFDAAV 518
G++ TGD ++ G + R+ ++I V + AE+E+ L HP +AAV
Sbjct: 552 GYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPKCAEAAV 605
>05_01_0146 - 953957-956278,956468-956786,957185-957213
Length = 889
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 341 SARGPTAPHTYRARTSPASAPHRAAVPRSTPRSPRLGAFRVCSGGVPT 198
S GP R R S S+ HR + P S R GA R GG P+
Sbjct: 9 SRSGPNESPISRGRPSTPSSNHRPSTPSSIHRPSTPGATRRSIGGTPS 56
>03_03_0217 + 15500943-15502196
Length = 417
Score = 31.5 bits (68), Expect = 0.42
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +3
Query: 156 AAFAVRLVAGIAGTRRNTAGTHAERAETRGAWCRARNGSTVRRGCGARTCAVCV 317
AA A AG AG RR AG E A V+ G GA CAVC+
Sbjct: 104 AAAAAAAFAGSAGRRRGRAGLDVAAMEALPVLTYA-TARAVKAGRGALECAVCL 156
>04_03_1017 + 21747044-21748051
Length = 335
Score = 31.1 bits (67), Expect = 0.55
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -1
Query: 380 HIPGSEPSVPRADSARGPTAPHTYRART--SPASAPHRAAVPRSTPRSP 240
+ P S P A P +P A SPAS P RAA P TP SP
Sbjct: 63 YTPASPPHRRAASPDYTPESPPRRAASPDYSPASPPRRAASPDYTPESP 111
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = -1
Query: 374 PGSEPSVPRADSARGPTAPHTYRART-----SPASAPHRAAVPRSTPRSP 240
P PS P +A +P T R SP++ P RAA P TP SP
Sbjct: 191 PDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSP 240
>03_05_0705 -
26965352-26965542,26965732-26965763,26966141-26966235,
26966737-26966810,26966894-26967029,26967137-26967200,
26967285-26967350,26967445-26967587,26969314-26969407,
26969779-26969902,26970016-26970193,26970273-26970395,
26970884-26970955,26971032-26971139,26972511-26972627,
26972757-26972889,26973209-26973299,26974642-26974722,
26975342-26975421,26975500-26975705,26977417-26977893
Length = 894
Score = 31.1 bits (67), Expect = 0.55
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +1
Query: 241 GERGVERGTAARCGADAGLVRARYVCGAVGPRAESARGTDGSEPG 375
G RG G ++ G + G R R AV PR RGT GS PG
Sbjct: 10 GRRGGPGGASSVRGGERGRKRGRGALDAVEPRVPLPRGT-GSGPG 53
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 31.1 bits (67), Expect = 0.55
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = -1
Query: 401 PGLVDFSHIPGSEPSVPRADSARGPTAPHTYRARTSPASAPHRAAVPRSTPRSPRLGAFR 222
P DF+ P + P+ P AP T TSP + P V ++P G+
Sbjct: 56 PPAPDFTSDPSTPPAPDAPSGDFFPPAPPTTTTPTSPGTTPSPTTVAADVSKTPS-GSGS 114
Query: 221 VCSGGVPTR 195
GG PT+
Sbjct: 115 GHHGGGPTK 123
>02_04_0166 - 20508656-20509092,20509282-20509372
Length = 175
Score = 30.7 bits (66), Expect = 0.73
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +1
Query: 235 RRGERGVERGTAARCGADAGLVRARYVCGAVGPRAESARGTDGS 366
RR +RG+ G A CG G GA G AE ARG D +
Sbjct: 37 RRSKRGISGG--AGCGGGGGARGQVTAVGASGAAAEDARGYDAA 78
>06_03_0322 - 19560242-19560671,19560833-19561122
Length = 239
Score = 30.3 bits (65), Expect = 0.97
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 247 RGVERGTAARCGADA-GLVRARYVCGAVGPRAESARG 354
R +ER ARCGA L R R CG+VGP A G
Sbjct: 99 RAIERMDVARCGASVLDLARER-PCGSVGPCAMGQLG 134
>05_04_0422 +
21122099-21122194,21122353-21122510,21122651-21122866,
21122965-21123379
Length = 294
Score = 30.3 bits (65), Expect = 0.97
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 391 LTLAISPVLNHPSLVPIRHEGPPPRTHTAH 302
+ +A PV +P LVP+ + PPP AH
Sbjct: 220 MVIAFQPVYPNPLLVPVPVQAPPPNQAFAH 249
>05_04_0210 +
19082778-19082940,19083806-19083875,19084172-19084295,
19084442-19084897
Length = 270
Score = 30.3 bits (65), Expect = 0.97
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = +3
Query: 180 AGIAGTRRNTAGTHAERAETRGAWCRARNGSTVRRGCGA 296
A A RR G RAE G W R R+G R CGA
Sbjct: 13 AAAAEDRRGADGIR--RAEGSGGWRRRRDGHVARARCGA 49
>03_06_0065 -
31399791-31399874,31399956-31400165,31400407-31400526,
31401166-31401225,31401670-31401879,31402512-31402587,
31403010-31403173,31403254-31403316,31403640-31403727,
31403810-31404460,31405102-31405149,31405334-31405902
Length = 780
Score = 30.3 bits (65), Expect = 0.97
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 311 YRARTSPASAPHRAAVPRSTPRSPRLGAFRVCSGGVPTR 195
++ SP+ +P ++ STP SP + GGVP+R
Sbjct: 4 WKRSVSPSPSPSSSSASASTPASPARASTSRVGGGVPSR 42
>10_04_0003 + 7382881-7383285,7383455-7383631,7383661-7383978
Length = 299
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 371 GSEPSVPRADSARGPTAPHTYRARTSPASAPHRAA-VPRSTPRSPRLGAFR 222
G+EPSVP A+ GP+A + A + P SAP + VP + + A R
Sbjct: 6 GAEPSVPVAEDGGGPSA--STSAPSQPPSAPAASVQVPNTADMAKAAAAAR 54
>08_02_0550 +
18509365-18509589,18509668-18510644,18510828-18511802,
18511885-18512142,18512216-18512326,18512418-18512496,
18512595-18512687,18512773-18512958
Length = 967
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 208 PPEHTRNAPRRGERGVERGTAARCGADAGLVRARYVCGAVGPRAESARGTDG 363
PPE +NAPRR +R + AA + + A VC + + RG G
Sbjct: 71 PPEPVKNAPRRSKR---KAQAAPTEREPTVEAASAVCPTASSKPKKRRGERG 119
>07_01_0516 - 3850252-3852870
Length = 872
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 328 PPPRTHTAHVRAPHPRRTVLPFRALHHAPRVSARSACVPAV 206
PPP AH +P P RT L RAL A R+A AV
Sbjct: 29 PPPPPPPAHGPSPPPPRTRLHTRALAAAASADPRAAHAVAV 69
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -1
Query: 374 PGSEPSVPRADS--ARGPTAPHTYRARTSPASAPHRAAVPRSTPRSP 240
P + PS P+ S A+ P P T T+P +AP AA P T SP
Sbjct: 86 PRNSPSPPKPPSQAAQSPLPPTT--TTTTPPTAPVPAAAPPPTAPSP 130
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 329 PTAPHTYRARTSPASAPHRAAVPRSTPRSPRLGAFRVCSGGV 204
P APH+ +PA+ P R + S+ RS R +F +GGV
Sbjct: 25 PAAPHSLSLPRAPAARPLRLSA--SSSRSARASSFVARAGGV 64
>01_03_0241 - 14111286-14111935,14111992-14112115
Length = 257
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = +1
Query: 214 EHTRNAPRRGERGVERGTAARCGADAGLVRARYVCGAVGPRAESARGTDG 363
E T A R RG E+G R G +A RAR+ G RA RG+ G
Sbjct: 146 EKTAAARARWRRGGEKG---RGGEEATAARARWSSGKKAARARWRRGSGG 192
>05_03_0036 +
7605138-7605445,7605718-7605805,7606355-7606408,
7606860-7606910,7607625-7607642
Length = 172
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = -2
Query: 373 PVLNHPSLVPIRHEGPPPRTHTAHVRAPHPRRTVLPFRALHHAPRVS 233
P+L P R G P H + P PR VLP RA H P +S
Sbjct: 25 PLLLEPLRRSTRDAGLAPTGHCS--AEPPPRSHVLPIRARHAGPSLS 69
>03_06_0191 - 32228642-32228949,32229028-32230567
Length = 615
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = -1
Query: 401 PGLVDFSHIPGSEPSVPRADSARGPTAPHTYRARTSPASAPHRAAVPRSTPRSPRLGAFR 222
P L I G P P A A + P + A + +AP RAA P +T RS R
Sbjct: 15 PRLAAARGISGQPPPSPHA--AAPTSTPQAFHAHLASLAAPSRAAHP-ATLRSILAALSR 71
Query: 221 VCSGGVP 201
+ G+P
Sbjct: 72 ARAAGLP 78
>03_02_0909 -
12310460-12310759,12310882-12310989,12311099-12311272,
12311370-12311490,12311569-12311651,12311754-12312420,
12314073-12314440
Length = 606
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 374 PGSEPSVPRADSARGPTA--PHTYRARTSPASAPHRAAVPRSTPRSP 240
P EP +PRA + RGP A PH + P+ + R RS R P
Sbjct: 75 PLPEPRIPRAAAIRGPLAARPHEF---AEPSPSTRRRFNRRSPQRRP 118
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 329 PTAPHTYRARTSPASAPHRAAVPRSTPRSPRLGAFRVCSGGVPT 198
P +P + + T+P P TP SP G+ R GG T
Sbjct: 261 PPSPSSGSSPTTPGGGGGYTPTPSDTPPSPSSGSSRTTPGGCST 304
>12_01_0880 - 8447941-8447981,8448928-8449261
Length = 124
Score = 28.7 bits (61), Expect = 3.0
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = -1
Query: 359 SVPRADSARGPTAPHTYRARTSPASAPHRAAVPRSTPRSPRLGA-FRVC--SGGVPT 198
+ PRAD A P ++P + P AA PR P + A R C GG PT
Sbjct: 5 AAPRADPAAAALRPTDPETASAPRADPAAAAAPRVYPVAASTPARIRRCDDGGGRPT 61
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 401 PGLVDFSHIPGSEPSVPRADSARGPTAPHTYRARTSPAS 285
P +VD S + G P+ P S GP AP SPA+
Sbjct: 43 PAVVD-SAVEGDAPAAPAPTSGSGPAAPSMPANPASPAT 80
>09_04_0521 - 18297343-18297840
Length = 165
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 359 SVPRADSARGPTAPHTYRARTSPASAPHR 273
SV A +A GP+ T+RAR PA HR
Sbjct: 65 SVSAAAAAAGPSLADTFRARFRPARFGHR 93
>08_02_0592 +
19064025-19066596,19067036-19067084,19068530-19068605,
19068767-19068922
Length = 950
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 218 TRGTRRDAGSVV*SAERQHG 277
TRG RDAG VV E++HG
Sbjct: 92 TRGVERDAGQVVAREEKRHG 111
>07_03_1507 - 27228032-27228742
Length = 236
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -1
Query: 362 PSVPRADSARGPTA--PHTYRARTSPASAPHRAAVP 261
PS P A R PTA P + +RT+P + AAVP
Sbjct: 84 PSTPSASPFRPPTAGAPSSSSSRTAPPPSSASAAVP 119
>03_04_0071 + 17048222-17048227,17048348-17048601,17048679-17048940
Length = 173
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 290 ASAPHRAAVPRSTPRSPRLGAFRVCSGGV 204
+S P +AAVPR +PR P A R +G +
Sbjct: 31 SSIPKQAAVPRISPRPPLQDASRTPAGNI 59
>02_05_0566 -
30017031-30017309,30018077-30018172,30018261-30018377,
30018538-30018667,30018866-30019029,30019480-30019485
Length = 263
Score = 28.7 bits (61), Expect = 3.0
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 324 GGPSCRIGTRD--GWFRTGDMAKVNESGLITVVDRLKELIKVKVLPVPPAELENVLKEHP 497
G PS R+G WF T D A V +S + V ++K+ + +K+ V E+E L+ P
Sbjct: 203 GDPS-RVGDMQIGRWFMTKDNALVKDSTVNVVSGKVKQEVHLKLQNVESGEMELELEWVP 261
>01_06_1740 - 39575614-39576981
Length = 455
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -1
Query: 374 PGSEPSVPRADSARGPTAPHTYRARTSPASAPHRAAVPRSTPRSPRLG 231
PG +PS A R H ++PA P A P+ PRLG
Sbjct: 99 PGKKPSYLPARLRRAEEGSHGRTPWSAPAGHPAPPAAVPEEPQEPRLG 146
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 362 PSVPRADSARGPTAPHTYRARTSPASAPHRAAVPRSTPRSP 240
PS+P SAR P +P A S ++ +P P SP
Sbjct: 215 PSIPAKKSARAPPSPKDTAAPVSVCLPSNKRVMPPFLPPSP 255
>10_02_0056 - 4656268-4656804
Length = 178
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 287 SAPHRAAVPRSTPRSPRLGAFRVCSGGV 204
S P +AAVPR +PR P A R +G V
Sbjct: 46 SIPKQAAVPRISPRPPLQDASRTLAGVV 73
>06_01_0576 - 4073261-4073821,4073891-4074145
Length = 271
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 323 APHTYRARTSPASAPHRAAVPRSTPRSPR 237
AP + + SPA AP ++ STPR+PR
Sbjct: 2 APFSSSSSPSPALAPASSSSTASTPRAPR 30
>03_02_0144 + 5910246-5910734
Length = 162
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 368 SEPSVPRADSARGPTAPHTYRARTSPASAPHRAAVPRSTP 249
S P + D+ T P T +PA P AAV R+TP
Sbjct: 35 STPPTTQEDAITMCTLPFTQSQSPAPAPLPSPAAVSRTTP 74
>12_02_0529 -
20067974-20068588,20069982-20070048,20070156-20070264,
20070357-20070402,20070501-20070636,20070745-20070866,
20070944-20071306,20071914-20072043,20072129-20072202,
20072620-20072709,20072836-20072875,20073047-20073117,
20074248-20074277
Length = 630
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 235 RRGERGVERGTAARCGADAGLVRARYVCGAVGPRAESARGTDGSEPGIWLKSTSPGL*L* 414
RR ERG A+ +G V G GPR +A G +PG ++ GL +
Sbjct: 514 RRRSVAAERGGGAKAAERSGRAEP-VVGGGGGPRTMTAGDGGGGQPGTQGRAVGGGLLIL 572
Query: 415 SIG 423
+G
Sbjct: 573 VVG 575
>07_01_1021 +
8736032-8736106,8736336-8736374,8737362-8737493,
8737848-8737892,8738450-8739157,8740679-8740807,
8741290-8741346,8742937-8742954
Length = 400
Score = 27.9 bits (59), Expect = 5.2
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = +3
Query: 210 AGTHAERAETRGAWCRARNGSTVRRGCGARTCAVCVRGGGPSCRIGTRDGWFRTGDMAKV 389
AG A R R G R GCGA A GGG C R G R V
Sbjct: 246 AGGEERGAGPRRLLVEGRRGGEARGGCGAAMEA--RGGGGAGCGASRRGGEARRECGTAV 303
Query: 390 NESG 401
E G
Sbjct: 304 EERG 307
>05_06_0097 + 25548272-25548664
Length = 130
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Frame = -1
Query: 362 PSVPRA-DSARGPTAPHTYRARTSPASA---PHRAAVPRSTPRSPRLGAFRVCSG 210
PS P R PT T+PA+A PH R+ S AF VC G
Sbjct: 50 PSAPVGIPVTRAPTTRRISHGSTAPAAAFVPPHELVAARARRCSEERAAFSVCVG 104
>02_02_0431 -
10152228-10152352,10152688-10152919,10153602-10153808,
10153915-10154034,10154114-10154260,10155080-10155147,
10155502-10155667,10156765-10156914,10157219-10157335,
10158177-10158281,10159050-10159147,10159594-10159763,
10161489-10161511,10161927-10162006,10162191-10162259,
10163198-10163442,10163614-10163810
Length = 772
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 280 GADAGLVRARYVCGAVGPRAESARGTD 360
GAD + R RY G GP + +G D
Sbjct: 663 GADVEIFRRRYYSGGKGPTVKGLKGAD 689
>01_07_0132 -
41298184-41298558,41298648-41298729,41298850-41298977,
41299059-41299157,41299279-41299434,41300709-41300783,
41301962-41302137,41303210-41303252,41303336-41303503,
41303584-41303731,41306316-41306587
Length = 573
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 261 RNGSTVRRGCGARTCAVCVRGGGPSCRIGTRDGWFRTGDMAKVNESGLITVVDRLKELIK 440
R G V GC A TCA+ + R R W R + + E G T RL++++
Sbjct: 3 RVGLGVAVGCAAVTCAIA--AALVARRASARARWRRAVALLREFEEGCATPPARLRQVVD 60
Query: 441 VKVL 452
V+
Sbjct: 61 AMVV 64
>01_01_0144 - 1316626-1316658,1317580-1318863
Length = 438
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 358 PSLVPIRHEGPPPRTHTAHVRAPHPRRTVL 269
PS+ P+ PP+ + H+ P P RT L
Sbjct: 64 PSVKPVAFLADPPQASSLHMLLPPPARTTL 93
>12_02_1174 - 26696869-26698191
Length = 440
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 358 PSLVPIRHEGPPPRTHTAHVRAPHPRRTVLP 266
P+L P+ PPPRT T V PH V P
Sbjct: 117 PALSPVPPPPPPPRTRT-RVEPPHRPPPVKP 146
>11_04_0319 - 16348349-16348591,16348818-16349066,16349827-16349832
Length = 165
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -1
Query: 356 VPRADSARGPTAPHTYRARTSP----ASAPHRAAVPRSTPRS 243
VP ARG +AP RT P +S P R P S PRS
Sbjct: 41 VPPPSLARGDSAPPPSGHRTPPHGAGSSTPQRNKDPASRPRS 82
>09_06_0006 + 20149326-20149646,20149750-20149824
Length = 131
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +1
Query: 208 PPEHTRNAPRRGERGVERGTAA--RCGADAGLVRARYVCGAVGPRAESARG 354
P E R + R TAA R GA G ++CG GP A RG
Sbjct: 31 PEEEVAGERRADAAELGRATAAPMRRGAAGGGSARAWLCGGAGPGAGRGRG 81
>09_04_0250 + 16074966-16075418
Length = 150
Score = 27.5 bits (58), Expect = 6.8
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Frame = +1
Query: 208 PPEHTRNAPRRGERGVERGTAARCGADAGL-----VRARYVCGAVGPRAESA-RGTDGSE 369
PP +T + RG +RGTAA G VRA V +V P + DG++
Sbjct: 20 PPGYTPSRVARGGGKKKRGTAAGAGTSRPRSTPTPVRAESVGSSVYPAVNAVDMVADGAQ 79
Query: 370 PGIWLKSTSPG 402
G+ PG
Sbjct: 80 GGLGFPEVPPG 90
>08_02_0526 +
18184146-18184168,18184247-18184438,18184846-18184954,
18185071-18185220,18185973-18186136,18186273-18186359,
18187083-18187137,18187911-18188333
Length = 400
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 247 RGVERGTAARCGADAGLVRARYVCGAVGPRAESARGTDGSEPG 375
RG+ GTA G AG RA+ + GA E G + PG
Sbjct: 302 RGIAAGTALARGIAAGTARAQGIVGAALHMTEILTGGVETGPG 344
>05_02_0155 + 7146999-7147276,7147447-7147492,7148153-7148284
Length = 151
Score = 27.5 bits (58), Expect = 6.8
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +3
Query: 183 GIAGTRRNTAGTHAERAETRGAWCRARNGSTVRRGCGARTCAVCVRGGGPSCRIGTRDG 359
GI G R+ A R+ + RAR + RR GA + GGG IG DG
Sbjct: 33 GIEGKERSAAHLSHARSGAKQKRARARRRAGRRRSTGAGEGSATTSGGG----IGRADG 87
>04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414
Length = 520
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -1
Query: 395 LVDFSHIPGSEPSVPRADSARGPTAPHTYRARTSPASAPHRAAVPRSTPRSPR 237
+ D+ P +EP S G T +A ++ PH A P P++PR
Sbjct: 224 IADYVGSPAAEPMRAFPASLTGATGSAFPQALSNQPQRPHSWATPALWPQAPR 276
>03_06_0628 -
35179951-35180265,35180653-35180889,35180982-35181140,
35181673-35181864,35182696-35182983,35183289-35183342,
35183561-35183671,35183780-35184011,35184097-35184302
Length = 597
Score = 27.5 bits (58), Expect = 6.8
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -3
Query: 321 PAHIPRTYEPRIRAAPCCRSALYTTL 244
P +PR+Y+ +++A P C S ++ L
Sbjct: 384 PDAVPRSYQDKVKATPQCESFMHLHL 409
>03_06_0277 + 32814621-32814996,32815419-32815558,32816074-32816160
Length = 200
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 344 DSARGPTAPHTYRARTSPASAPHRAAVPRSTPRSPRLGAFRVCSGGVP 201
D+AR P + PAS + A VP S+P +P SGG P
Sbjct: 103 DTARAALLPGACSVQAPPASQCNAAGVPVSSPANP------TTSGGTP 144
>02_05_0331 +
28003454-28003912,28004649-28004873,28005017-28005370,
28005673-28005702,28006869-28007342
Length = 513
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 295 APHPRRTVLPFRALHHAPRVSARSACVPAVFRRVP 191
+PHPR +P RAL + +A + CV A VP
Sbjct: 79 SPHPRAPPVPRRALAASLLAAAGALCVGAAASLVP 113
>02_03_0181 + 16100495-16101025,16101335-16101358
Length = 184
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 208 PPEHTRNAPRRGERGVERGTAARCGADAGLVRAR 309
P + R AP+ G+RGV R A G + +V R
Sbjct: 82 PTDGWRGAPQSGDRGVGRRELAVMGTEVAVVDTR 115
>02_01_0448 + 3227721-3228968
Length = 415
Score = 27.5 bits (58), Expect = 6.8
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +3
Query: 306 AVCVRGGGPSCRIGTRDGWFRTGDMAKVNESGLITVVDRLKELIKVKVLP--VPPA--EL 473
AVC R G P+ + DGW R D A G + VD ++L+ V + PPA +
Sbjct: 197 AVC-RPGAPAWSVSGGDGWRRIKDTAFY--QGKLYAVDHNEDLLAVTLAADGEPPAVSRI 253
Query: 474 ENVLKEHP 497
+ V+ P
Sbjct: 254 DRVINGKP 261
>01_06_1074 +
34318685-34319314,34319429-34319546,34319662-34319814,
34319906-34320021,34320135-34320302,34320424-34320551,
34320645-34320744,34320866-34320958
Length = 501
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 374 PGSEPSVPRADSARGPTAPHTYRARTSPASAPHRAAVPRSTPRSPRLG 231
PGS + P + A +++A SP+SAP + P P P LG
Sbjct: 6 PGSGDAEPASSDASTGNGSSSFKAGASPSSAPAQNKPP--APIGPVLG 51
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 23.0 bits (47), Expect(2) = 7.3
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -2
Query: 295 APHPRRTVLPFRALHHAPRVSARSACVPA 209
+P+P ++ P + HH P + S P+
Sbjct: 113 SPNPSPSISPSSSFHHHPEPPSPSPSAPS 141
Score = 22.6 bits (46), Expect(2) = 7.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -2
Query: 373 PVLNHPSLVPIRHEGPPPRTHTAHVRAPHP 284
P +H + P++ PPP+ H PHP
Sbjct: 65 PYAHHSA--PLQPYPPPPQHHAYPPPQPHP 92
>10_01_0088 + 1087807-1088282,1088752-1088974
Length = 232
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +3
Query: 165 AVRLVAGIAGTRRNTAGTHAERAETRGAWCRARNGSTVRRG 287
AV G+ G R AG H +GA A G RRG
Sbjct: 23 AVVEAGGVQGARATPAGGHGGDRRRKGAGLAAAGGDGRRRG 63
>08_02_1481 - 27413397-27413414,27413738-27414367,27414471-27415484
Length = 553
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = -1
Query: 335 RGPTAPHTYRARTSPASAPHRAAVPRSTPRSPRLGAFRVCSGGVPTR 195
R + H + R ASA RA + R + R A GGV R
Sbjct: 169 RRVASTHLFSPRQVSASAAQRAVIARQMVEAMRSAAAAAAGGGVAAR 215
>08_02_0797 +
21307534-21307639,21307907-21308988,21309385-21309432,
21309705-21310217
Length = 582
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 199 VGTPPEHTRNAPRRGERGVERGTAARCGADAGLVR 303
VGTP P GE AA C A++ L+R
Sbjct: 146 VGTPAAMITRQPSSGETTTTAALAATCDAESALLR 180
>07_01_0776 +
5983684-5983857,5983962-5984072,5984151-5984302,
5984403-5984460,5984568-5984616,5984714-5984958,
5985129-5985206,5986016-5986246
Length = 365
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -1
Query: 365 EPSVPRADSARGPTAPHTYRARTS---PASAPHRAAVPRSTP 249
EPS +P+ + R++ P SAP RAA+P +TP
Sbjct: 183 EPSQATLVPYAAVESPYPLKGRSASKLPVSAPGRAALPNATP 224
>06_03_0022 -
15536811-15536899,15537485-15537664,15537706-15537982,
15538680-15538883,15539431-15539496,15539933-15539953,
15541622-15541731,15543244-15544236,15544928-15544955,
15545035-15545093,15545177-15545204,15545453-15545475,
15545784-15545853,15546980-15547033,15547127-15547169,
15548126-15548175
Length = 764
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +3
Query: 222 AERAETRGAWCRARNGSTVRRGCGARTCAVCVRGGGPSC 338
++RA+ +C+ G + +GC + C GG P C
Sbjct: 229 SKRAQGNAMYCKIHRGGS--KGCMVQGCTKGAHGGTPLC 265
>06_01_0368 +
2645007-2645317,2645422-2645509,2648927-2649183,
2649453-2649504,2649527-2649838
Length = 339
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -1
Query: 344 DSARGPTAPHTYRARTSPASAPHRAAVPRSTPRSPR 237
D A+ AP T P A H VPR TP SPR
Sbjct: 186 DVAQADVAPQRPPRPTGPRPAAH---VPRPTPPSPR 218
>05_06_0038 -
25100851-25101474,25101945-25102058,25102151-25102441,
25102552-25102860,25103458-25104186
Length = 688
Score = 27.1 bits (57), Expect = 9.0
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +3
Query: 138 AGRLDAAAFAVRLVAGIAGTRRNTAGTHAERAETRGAWCRARNGSTVR 281
AGRL AA A VA A R + T A+ A RAR+ +R
Sbjct: 73 AGRLTGAASAALAVASAARRRVASGRTDADAAPGESTALRARSYGCIR 120
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 373 PVLNHPSLVPIRHEGPPPRTHTAHVRAPHP 284
P L HP P H PP H H PHP
Sbjct: 29 PHLRHPHHHPPHHHPHPPHHHPPH--HPHP 56
>04_03_1022 - 21778315-21779007
Length = 230
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = -2
Query: 379 ISPVLNHPSLVPIRHEGPPPRTHTAHVRAPHPR--RTVLPFRALHHAPRVSA 230
+ P L PS P + PP H H AP P + P HH P A
Sbjct: 48 VPPHLLPPSPAPQQWYDHPPNYHPPHTPAPAPAPGPYIPPHHPHHHHPPTPA 99
>02_02_0580 +
11757667-11758258,11758419-11758572,11758682-11758756,
11758836-11758980,11759222-11759287,11759347-11759500,
11761506-11761624
Length = 434
Score = 27.1 bits (57), Expect = 9.0
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +1
Query: 253 VERGTAARCGADAGLVRARYVCGAVGPRAESARGTDGSEPGIWLKSTSPGL 405
VERG + R D L AR V +A+ EP + LK SP L
Sbjct: 278 VERGRSFRLTEDDVLRAARAVLPVANSMISTAQVIFSGEPSMTLKGFSPAL 328
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,360,300
Number of Sequences: 37544
Number of extensions: 277725
Number of successful extensions: 1711
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 1596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1702
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -