Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_M10
(395 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1568 + 27922338-27922342,27922839-27923058,27923369-279235... 144 2e-35
08_02_1573 + 27956351-27956409,27956411-27956630,27957000-279571... 144 3e-35
02_02_0678 + 12868735-12868739,12869576-12869795,12870280-128704... 140 5e-34
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 133 4e-32
05_07_0079 - 27539389-27539892,27540059-27540343,27540453-275405... 54 4e-08
04_04_0401 - 24946801-24947562 44 6e-05
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 30 0.78
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547... 29 1.8
02_03_0006 - 13868590-13869593,13869887-13870156,13870487-13871090 23 3.7
12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693 27 5.5
05_01_0077 + 520761-520929,521164-521435,521530-521566,521743-52... 27 5.5
01_05_0390 - 21720118-21720573,21720667-21721296,21721427-217217... 27 5.5
01_05_0389 + 21716056-21716191,21716275-21716597,21716889-217175... 27 5.5
09_06_0028 + 20328599-20328821,20330659-20330735,20330806-203309... 27 7.2
05_07_0277 - 28909502-28909621,28910053-28910583,28910629-289107... 27 7.2
02_02_0231 - 8091431-8092900 27 7.2
08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004 26 9.6
08_01_0170 - 1440908-1441072,1441539-1441581,1442155-1442619,144... 26 9.6
08_01_0169 - 1396657-1396710,1396801-1396843,1397440-1397904,139... 26 9.6
03_02_0522 + 9103357-9103437,9103538-9103592,9103687-9103739,910... 26 9.6
01_06_1110 - 34582267-34582468,34582732-34582819,34589337-345894... 26 9.6
>08_02_1568 +
27922338-27922342,27922839-27923058,27923369-27923519,
27923874-27924079,27924211-27924264
Length = 211
Score = 144 bits (350), Expect = 2e-35
Identities = 66/108 (61%), Positives = 88/108 (81%)
Frame = -1
Query: 395 FLASESLIKQIPRLLGPGLDKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAV 216
FLASE++IKQIPRLLGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAV
Sbjct: 109 FLASEAIIKQIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAV 163
Query: 215 GHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 72
G++ M ++ QN+ +S+NFLVSLLKK+WQNVR L++KSTMG P R++
Sbjct: 164 GNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPYRVF 211
>08_02_1573 +
27956351-27956409,27956411-27956630,27957000-27957150,
27957602-27957807,27957967-27958020
Length = 229
Score = 144 bits (348), Expect = 3e-35
Identities = 66/108 (61%), Positives = 88/108 (81%)
Frame = -1
Query: 395 FLASESLIKQIPRLLGPGLDKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAV 216
FLASE++IKQIPRLLGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAV
Sbjct: 127 FLASEAIIKQIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAV 181
Query: 215 GHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 72
G++ M ++ QN+ +S+NFLVSLLKK+WQNVR L++KSTMG P R++
Sbjct: 182 GNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 229
>02_02_0678 +
12868735-12868739,12869576-12869795,12870280-12870430,
12870853-12871058,12871166-12871219
Length = 211
Score = 140 bits (338), Expect = 5e-34
Identities = 66/108 (61%), Positives = 86/108 (79%)
Frame = -1
Query: 395 FLASESLIKQIPRLLGPGLDKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAV 216
FLASE++IKQIPRLLGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAV
Sbjct: 109 FLASEAIIKQIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAV 163
Query: 215 GHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 72
G+ M ++ QNV +S+NFLVSLLKK+WQNVR L++KSTMG R++
Sbjct: 164 GNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKVYRVF 211
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 133 bits (322), Expect = 4e-32
Identities = 70/130 (53%), Positives = 91/130 (70%), Gaps = 22/130 (16%)
Frame = -1
Query: 395 FLASESLIKQIPRLLGPGLDKAGK----------------------FPGLLSHQESMTQK 282
FLASE++IKQIPRLLGPGL+KAGK FP L++HQES+ K
Sbjct: 109 FLASEAIIKQIPRLLGPGLNKAGKILLVYGRSILKSSYIIVSKRGKFPTLVTHQESLESK 168
Query: 281 IDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMK 102
++E K T+KFQ+KKVLC+ VAVG+ M ++ QNV +S+NFLVSLLKK+WQNVR L++K
Sbjct: 169 VNETKATVKFQLKKVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLK 228
Query: 101 STMGPPQRLY 72
STMG R++
Sbjct: 229 STMGKVIRVF 238
>05_07_0079 -
27539389-27539892,27540059-27540343,27540453-27540550,
27540951-27541042,27541155-27541259,27541360-27541567,
27542469-27542472,27542742-27542765,27545025-27546266
Length = 853
Score = 54.0 bits (124), Expect = 4e-08
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = -1
Query: 395 FLASESLIKQIPRLLGPGLDKAGKFPGLLSHQES-MTQKIDEVKGTIKFQMKKVLCLSVA 219
F+A +++ +PR+LG K P + + +++ +V + ++ C +
Sbjct: 140 FIADRAVLPLLPRVLGKAFYSTKKAPVAVDFARTGWLEQVRKVMNSTFLYLRTGTCSGIK 199
Query: 218 VGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 99
VG +DM ++ +NV ++ V + K W NVRSLH+K+
Sbjct: 200 VGRLDMKEEDTVENVMAAVEAAVENVPKKWANVRSLHLKA 239
>04_04_0401 - 24946801-24947562
Length = 253
Score = 43.6 bits (98), Expect = 6e-05
Identities = 22/93 (23%), Positives = 44/93 (47%)
Frame = -1
Query: 350 GPGLDKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVH 171
G KA + + ++ + E ++ +++ C +V VGH M +E +NV
Sbjct: 113 GKAAAKAARVVPVDLADQAWAESAREAARRVELRVEGGTCRAVRVGHAAMAREEAVENVV 172
Query: 170 LSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 72
++ + + + W+NVR+LH+K+ LY
Sbjct: 173 AAVEAAAACVPRKWRNVRALHVKAPESVALPLY 205
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 29.9 bits (64), Expect = 0.78
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -1
Query: 188 LAQNVHLSINFLVSLLKKH 132
+ + VHLS+NF++ L+KKH
Sbjct: 302 IVEGVHLSLNFVMGLMKKH 320
>09_06_0364 +
22554082-22554225,22554306-22554520,22554671-22554752,
22554976-22555371,22555553-22556293,22556420-22556551,
22556981-22557367
Length = 698
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 206 DMTPDELAQNVHLSINFLVSLLKKH 132
D + + VHLS+NF++ L++KH
Sbjct: 262 DRKESVVVEGVHLSLNFVMGLMRKH 286
>02_03_0006 - 13868590-13869593,13869887-13870156,13870487-13871090
Length = 625
Score = 23.4 bits (48), Expect(2) = 3.7
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = +1
Query: 148 DTRKLIERCTFWASSSGV 201
D+++ + RCT W G+
Sbjct: 101 DSKEFVRRCTSWQRQGGI 118
Score = 22.6 bits (46), Expect(2) = 3.7
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = +1
Query: 76 NLWGGPIVDFICRERTFCQCFLSSDTRKLIERC 174
++W + +C + +C + + K+IERC
Sbjct: 38 HIWDETYLYRVCSDGLLRRCVPTDEGLKIIERC 70
>12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693
Length = 407
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 363 SASPWSWSR*GWQVPWSLIP 304
SA WSW GW VP + P
Sbjct: 273 SAFAWSWGPLGWLVPSEIFP 292
>05_01_0077 +
520761-520929,521164-521435,521530-521566,521743-521840,
521979-522040,522324-522447,522688-522807
Length = 293
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 316 PGNLPALSRPGPRRRGICLIN 378
P NL A SRPGPRR G+ +++
Sbjct: 18 PCNLTA-SRPGPRRAGLAVVS 37
>01_05_0390 -
21720118-21720573,21720667-21721296,21721427-21721749,
21721844-21721973
Length = 512
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 363 SASPWSWSR*GWQVPWSLIP 304
SA WSW GW VP + P
Sbjct: 397 SAFAWSWGPLGWLVPSEIFP 416
>01_05_0389 +
21716056-21716191,21716275-21716597,21716889-21717518,
21717602-21718054
Length = 513
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 363 SASPWSWSR*GWQVPWSLIP 304
SA WSW GW VP + P
Sbjct: 399 SAFAWSWGPLGWLVPSEIFP 418
>09_06_0028 +
20328599-20328821,20330659-20330735,20330806-20330968,
20331095-20331156,20331250-20331328,20331818-20331898,
20332068-20332216,20332254-20332319,20332495-20332643,
20332722-20332761,20333001-20333015
Length = 367
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 115 ERTFCQCFLSSDTRKLIERCTFWASSSGVM 204
E T C CFL D RC F AS+ V+
Sbjct: 336 ETTICMCFLEMDKLLHRLRCIFVASAGHVV 365
>05_07_0277 -
28909502-28909621,28910053-28910583,28910629-28910721,
28910758-28911501
Length = 495
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -3
Query: 186 CPKCAPFNQLPCVAT*EALAECALS----AYEVDNGTTPEI 76
C K P QLP + T E A+S A+ DNGT P +
Sbjct: 313 CQKLPPLGQLPLLKTAEINGMSAVSIIDDAFYGDNGTFPSL 353
>02_02_0231 - 8091431-8092900
Length = 489
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 180 LGKFIWSHVDVTDGHRQAQHLLHLEFDGSLDFINFLCHGFLVG*ETRELASLIE 341
+G F+ S D G L L+ GS+ F++F G L +TRELA+ +E
Sbjct: 256 VGPFVRSSSDEA-GESACLEWLDLQPAGSVVFVSFGSFGVLSVEQTRELAAGLE 308
>08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004
Length = 681
Score = 26.2 bits (55), Expect = 9.6
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 66 NLIQSLGWSHCRLHMQRAHILPVLLK*RHKEVD*KVHILGKFI-W-SHVDVTDGHRQAQH 239
NL+Q +GW H R +L V ++ +D +H G F+ W +++ G A
Sbjct: 434 NLVQLIGWCH-----GRTELLLVYELVPNRSLDVHLHGNGTFLTWPMRINIVHGLGSALL 488
Query: 240 LLHLEFD 260
LH E+D
Sbjct: 489 YLHEEWD 495
>08_01_0170 -
1440908-1441072,1441539-1441581,1442155-1442619,
1442714-1444149
Length = 702
Score = 26.2 bits (55), Expect = 9.6
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 66 NLIQSLGWSHCRLHMQRAHILPVLLK*RHKEVD*KVHILGKFI-W-SHVDVTDGHRQAQH 239
NL+Q +GW H R +L V ++ +D +H G F+ W +++ G A
Sbjct: 437 NLVQLIGWCH-----GRTELLLVYELFPNRSLDVHLHGNGTFLTWPMRINIVHGLGSALL 491
Query: 240 LLHLEFD 260
LH E+D
Sbjct: 492 YLHEEWD 498
>08_01_0169 -
1396657-1396710,1396801-1396843,1397440-1397904,
1397999-1399395
Length = 652
Score = 26.2 bits (55), Expect = 9.6
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 66 NLIQSLGWSHCRLHMQRAHILPVLLK*RHKEVD*KVHILGKFI-W-SHVDVTDGHRQAQH 239
NL+Q +GW H R +L V ++ +D +H G F+ W +++ G A
Sbjct: 424 NLVQLIGWCH-----GRTELLLVYELFPNRSLDVHLHGNGTFLTWPMRINIVHGLGSALL 478
Query: 240 LLHLEFD 260
LH E+D
Sbjct: 479 YLHEEWD 485
>03_02_0522 +
9103357-9103437,9103538-9103592,9103687-9103739,
9103832-9104060,9104149-9104284,9104448-9104496,
9105123-9105248,9106003-9106110,9106255-9106395
Length = 325
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 266 P*LHQFSVSWIPGGIRDQGTC 328
P LHQF + I +R QGTC
Sbjct: 239 PCLHQFHANCIDPWLRQQGTC 259
>01_06_1110 -
34582267-34582468,34582732-34582819,34589337-34589439,
34589886-34589914,34590114-34590144,34590621-34590822,
34591424-34591539,34591784-34592006,34592151-34592238,
34592336-34592407,34592485-34592560,34593822-34593880,
34595341-34595404,34595487-34595618
Length = 494
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 171 VHILGKFIWSHVDV---TDGHRQAQHLLHLEFD 260
V + G F+WS VDV +G++ L ++FD
Sbjct: 431 VDVRGYFVWSFVDVYELLEGYQSRSGLYRVDFD 463
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,853,628
Number of Sequences: 37544
Number of extensions: 252338
Number of successful extensions: 691
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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