Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_M08
(468 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 165 7e-41
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 163 2e-40
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 163 2e-40
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 163 2e-40
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 163 2e-40
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 163 2e-40
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 163 2e-40
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 163 2e-40
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 163 2e-40
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 132 4e-31
AK127658-1|BAC87076.1| 626|Homo sapiens protein ( Homo sapiens ... 31 1.5
AB082533-1|BAC02711.1| 764|Homo sapiens KIAA2002 protein protein. 31 1.5
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 165 bits (401), Expect = 7e-41
Identities = 77/97 (79%), Positives = 85/97 (87%)
Frame = +2
Query: 8 AHRAMMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV 187
A A MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV
Sbjct: 5 AAAAAMSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPV 64
Query: 188 AVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQK 298
VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K
Sbjct: 65 TVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEK 101
Score = 42.3 bits (95), Expect = 8e-04
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 357 AKKIDRHLYHSLYMKAKGNVVQEQ 428
+KKIDRH+YHSLY+K KGNV + +
Sbjct: 121 SKKIDRHMYHSLYLKVKGNVFKNK 144
Score = 30.3 bits (65), Expect = 3.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 415 LFKNKRVLMEYIHRKNAE 468
+FKNKR+LME+IH+ A+
Sbjct: 140 VFKNKRILMEHIHKLKAD 157
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 163 bits (397), Expect = 2e-40
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +2
Query: 23 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 ARVRKNTEARRKGRHCGFGKRRGTANARMPQK 298
AR RKNT ARRKGRH G GKR+GTANARMP+K
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEK 92
Score = 42.3 bits (95), Expect = 8e-04
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 357 AKKIDRHLYHSLYMKAKGNVVQEQ 428
+KKIDRH+YHSLY+K KGNV + +
Sbjct: 112 SKKIDRHMYHSLYLKVKGNVFKNK 135
Score = 30.3 bits (65), Expect = 3.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 415 LFKNKRVLMEYIHRKNAE 468
+FKNKR+LME+IH+ A+
Sbjct: 131 VFKNKRILMEHIHKLKAD 148
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 163 bits (397), Expect = 2e-40
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +2
Query: 23 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 ARVRKNTEARRKGRHCGFGKRRGTANARMPQK 298
AR RKNT ARRKGRH G GKR+GTANARMP+K
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEK 92
Score = 42.3 bits (95), Expect = 8e-04
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 357 AKKIDRHLYHSLYMKAKGNVVQEQ 428
+KKIDRH+YHSLY+K KGNV + +
Sbjct: 112 SKKIDRHMYHSLYLKVKGNVFKNK 135
Score = 30.3 bits (65), Expect = 3.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 415 LFKNKRVLMEYIHRKNAE 468
+FKNKR+LME+IH+ A+
Sbjct: 131 VFKNKRILMEHIHKLKAD 148
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 163 bits (397), Expect = 2e-40
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +2
Query: 23 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 ARVRKNTEARRKGRHCGFGKRRGTANARMPQK 298
AR RKNT ARRKGRH G GKR+GTANARMP+K
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEK 92
Score = 42.3 bits (95), Expect = 8e-04
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 357 AKKIDRHLYHSLYMKAKGNVVQEQ 428
+KKIDRH+YHSLY+K KGNV + +
Sbjct: 112 SKKIDRHMYHSLYLKVKGNVFKNK 135
Score = 30.3 bits (65), Expect = 3.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 415 LFKNKRVLMEYIHRKNAE 468
+FKNKR+LME+IH+ A+
Sbjct: 131 VFKNKRILMEHIHKLKAD 148
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 163 bits (397), Expect = 2e-40
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +2
Query: 23 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 ARVRKNTEARRKGRHCGFGKRRGTANARMPQK 298
AR RKNT ARRKGRH G GKR+GTANARMP+K
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEK 92
Score = 42.3 bits (95), Expect = 8e-04
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 357 AKKIDRHLYHSLYMKAKGNVVQEQ 428
+KKIDRH+YHSLY+K KGNV + +
Sbjct: 112 SKKIDRHMYHSLYLKVKGNVFKNK 135
Score = 30.3 bits (65), Expect = 3.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 415 LFKNKRVLMEYIHRKNAE 468
+FKNKR+LME+IH+ A+
Sbjct: 131 VFKNKRILMEHIHKLKAD 148
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 163 bits (397), Expect = 2e-40
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +2
Query: 23 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 ARVRKNTEARRKGRHCGFGKRRGTANARMPQK 298
AR RKNT ARRKGRH G GKR+GTANARMP+K
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEK 92
Score = 42.3 bits (95), Expect = 8e-04
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 357 AKKIDRHLYHSLYMKAKGNVVQEQ 428
+KKIDRH+YHSLY+K KGNV + +
Sbjct: 112 SKKIDRHMYHSLYLKVKGNVFKNK 135
Score = 30.3 bits (65), Expect = 3.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 415 LFKNKRVLMEYIHRKNAE 468
+FKNKR+LME+IH+ A+
Sbjct: 131 VFKNKRILMEHIHKLKAD 148
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 163 bits (397), Expect = 2e-40
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +2
Query: 23 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 ARVRKNTEARRKGRHCGFGKRRGTANARMPQK 298
AR RKNT ARRKGRH G GKR+GTANARMP+K
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEK 92
Score = 42.3 bits (95), Expect = 8e-04
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 357 AKKIDRHLYHSLYMKAKGNVVQEQ 428
+KKIDRH+YHSLY+K KGNV + +
Sbjct: 112 SKKIDRHMYHSLYLKVKGNVFKNK 135
Score = 30.3 bits (65), Expect = 3.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 415 LFKNKRVLMEYIHRKNAE 468
+FKNKR+LME+IH+ A+
Sbjct: 131 VFKNKRILMEHIHKLKAD 148
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 163 bits (397), Expect = 2e-40
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +2
Query: 23 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 ARVRKNTEARRKGRHCGFGKRRGTANARMPQK 298
AR RKNT ARRKGRH G GKR+GTANARMP+K
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEK 92
Score = 42.3 bits (95), Expect = 8e-04
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 357 AKKIDRHLYHSLYMKAKGNVVQEQ 428
+KKIDRH+YHSLY+K KGNV + +
Sbjct: 112 SKKIDRHMYHSLYLKVKGNVFKNK 135
Score = 30.3 bits (65), Expect = 3.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 415 LFKNKRVLMEYIHRKNAE 468
+FKNKR+LME+IH+ A+
Sbjct: 131 VFKNKRILMEHIHKLKAD 148
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 163 bits (397), Expect = 2e-40
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +2
Query: 23 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 202
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 203 ARVRKNTEARRKGRHCGFGKRRGTANARMPQK 298
AR RKNT ARRKGRH G GKR+GTANARMP+K
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEK 92
Score = 42.3 bits (95), Expect = 8e-04
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 357 AKKIDRHLYHSLYMKAKGNVVQEQ 428
+KKIDRH+YHSLY+K KGNV + +
Sbjct: 112 SKKIDRHMYHSLYLKVKGNVFKNK 135
Score = 30.3 bits (65), Expect = 3.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 415 LFKNKRVLMEYIHRKNAE 468
+FKNKR+LME+IH+ A+
Sbjct: 131 VFKNKRILMEHIHKLKAD 148
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 132 bits (320), Expect = 4e-31
Identities = 60/73 (82%), Positives = 65/73 (89%)
Frame = +2
Query: 80 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFG 259
KKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G G
Sbjct: 1 KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIG 60
Query: 260 KRRGTANARMPQK 298
KR+GTANARMP+K
Sbjct: 61 KRKGTANARMPEK 73
Score = 42.3 bits (95), Expect = 8e-04
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +3
Query: 357 AKKIDRHLYHSLYMKAKGNVVQEQ 428
+KKIDRH+YHSLY+K KGNV + +
Sbjct: 93 SKKIDRHMYHSLYLKVKGNVFKNK 116
Score = 30.3 bits (65), Expect = 3.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 415 LFKNKRVLMEYIHRKNAE 468
+FKNKR+LME+IH+ A+
Sbjct: 112 VFKNKRILMEHIHKLKAD 129
>AK127658-1|BAC87076.1| 626|Homo sapiens protein ( Homo sapiens
cDNA FLJ45756 fis, clone MESAN2009156. ).
Length = 626
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -3
Query: 271 TSPLTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDL 104
T P++K S + LCV AN + +D NW D + ++ L G+ I + L
Sbjct: 413 TEPISKDLQKSMESSLCVMANPTYDIDPNW--DASSAGSSISYELKGLDIESYDSL 466
>AB082533-1|BAC02711.1| 764|Homo sapiens KIAA2002 protein protein.
Length = 764
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -3
Query: 271 TSPLTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDL 104
T P++K S + LCV AN + +D NW D + ++ L G+ I + L
Sbjct: 183 TEPISKDLQKSMESSLCVMANPTYDIDPNW--DASSAGSSISYELKGLDIESYDSL 236
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,148,418
Number of Sequences: 237096
Number of extensions: 1344585
Number of successful extensions: 2791
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2791
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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