Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_M06
(249 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M96803-1|AAA60580.1| 2364|Homo sapiens beta-spectrin protein. 75 4e-14
AC093110-1|AAY24229.1| 2314|Homo sapiens unknown protein. 75 4e-14
AB209748-1|BAD92985.1| 2377|Homo sapiens spectrin, beta, non-ery... 75 4e-14
M37884-1|AAA63259.1| 1274|Homo sapiens muscle beta spectrin prot... 74 1e-13
AB209415-1|BAD92652.1| 2332|Homo sapiens spectrin, beta, erythro... 74 1e-13
BC139788-1|AAI39789.1| 934|Homo sapiens SPTBN2 protein protein. 71 9e-13
AF026488-2|AAC79504.1| 228|Homo sapiens beta III spectrin protein. 71 9e-13
AF026488-1|AAC79503.1| 253|Homo sapiens beta III spectrin protein. 71 9e-13
AF026487-1|AAC79502.1| 491|Homo sapiens beta III spectrin protein. 71 9e-13
AB008567-1|BAA32700.1| 2390|Homo sapiens beta-spectrin III protein. 71 9e-13
AY004226-2|AAF93172.1| 1307|Homo sapiens betaIV spectrin isoform... 59 2e-09
AF324063-1|AAQ14860.1| 2564|Homo sapiens non-erythrocytic beta-s... 59 2e-09
AF311855-1|AAG42473.1| 2564|Homo sapiens spectrin beta IV protein. 59 2e-09
AF082075-1|AAG38874.1| 2559|Homo sapiens beta4sigma1 spectrin pr... 59 2e-09
AF465439-1|AAL73492.1| 1028|Homo sapiens beta I spectrin form be... 54 3e-09
BX537570-1|CAD97787.1| 1004|Homo sapiens hypothetical protein pr... 35 0.055
AL392104-1|CAI40176.1| 1957|Homo sapiens Rho GTPase activating p... 35 0.055
AL355979-1|CAI14323.1| 1957|Homo sapiens Rho GTPase activating p... 35 0.055
AF480466-1|AAM22955.1| 1957|Homo sapiens Rho-GTPase activating p... 35 0.055
AB037845-1|BAA92662.2| 1944|Homo sapiens KIAA1424 protein protein. 35 0.055
BC038976-1|AAH38976.2| 475|Homo sapiens Rho GTPase activating p... 31 0.89
BC016701-1|AAH16701.1| 475|Homo sapiens Rho GTPase activating p... 31 0.89
AY219338-1|AAO34684.1| 475|Homo sapiens ARHGAP15 protein. 31 0.89
AC098857-1|AAX93245.1| 103|Homo sapiens unknown protein. 31 0.89
BC101391-1|AAI01392.3| 521|Homo sapiens ARHGAP27 protein protein. 28 4.8
BC101390-1|AAI01391.1| 548|Homo sapiens Rho GTPase activating p... 28 4.8
BC101389-1|AAI01390.1| 548|Homo sapiens Rho GTPase activating p... 28 4.8
BC101388-1|AAI01389.1| 548|Homo sapiens Rho GTPase activating p... 28 4.8
AK125535-1|BAC86196.1| 548|Homo sapiens protein ( Homo sapiens ... 28 4.8
BC117135-1|AAI17136.1| 1233|Homo sapiens SEC24 related gene fami... 27 8.3
BC111728-1|AAI11729.1| 889|Homo sapiens oxysterol-binding prote... 27 8.3
BC101529-1|AAI01530.1| 889|Homo sapiens oxysterol binding prote... 27 8.3
BC093834-1|AAH93834.1| 889|Homo sapiens oxysterol binding prote... 27 8.3
BC082235-1|AAH82235.1| 728|Homo sapiens OSBPL8 protein protein. 27 8.3
BC040137-1|AAH40137.1| 1268|Homo sapiens SEC24 related gene fami... 27 8.3
AK055835-1|BAB71026.1| 420|Homo sapiens protein ( Homo sapiens ... 27 8.3
AJ131245-1|CAA10335.1| 1268|Homo sapiens Sec24B protein protein. 27 8.3
AF392452-1|AAL40665.1| 889|Homo sapiens oxysterol-binding prote... 27 8.3
AF323730-1|AAG53411.1| 536|Homo sapiens OSBP-related protein 8 ... 27 8.3
AB040884-1|BAA95975.3| 939|Homo sapiens KIAA1451 protein protein. 27 8.3
>M96803-1|AAA60580.1| 2364|Homo sapiens beta-spectrin protein.
Length = 2364
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/77 (49%), Positives = 47/77 (61%)
Frame = +2
Query: 17 VEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDL 196
+EG L RKHEWE+ K+AS+RSW VY V + M FYKD K A+ + E P L
Sbjct: 2200 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKT--AASGIPYHSEVPVSL 2257
Query: 197 NGAVVEVAANYTRKKHV 247
AV EVA +Y +KKHV
Sbjct: 2258 KEAVCEVALDYKKKKHV 2274
>AC093110-1|AAY24229.1| 2314|Homo sapiens unknown protein.
Length = 2314
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/77 (49%), Positives = 47/77 (61%)
Frame = +2
Query: 17 VEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDL 196
+EG L RKHEWE+ K+AS+RSW VY V + M FYKD K A+ + E P L
Sbjct: 2150 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKT--AASGIPYHSEVPVSL 2207
Query: 197 NGAVVEVAANYTRKKHV 247
AV EVA +Y +KKHV
Sbjct: 2208 KEAVCEVALDYKKKKHV 2224
>AB209748-1|BAD92985.1| 2377|Homo sapiens spectrin, beta,
non-erythrocytic 1 isoform 1 variant protein.
Length = 2377
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/77 (49%), Positives = 47/77 (61%)
Frame = +2
Query: 17 VEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDL 196
+EG L RKHEWE+ K+AS+RSW VY V + M FYKD K A+ + E P L
Sbjct: 2213 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKT--AASGIPYHSEVPVSL 2270
Query: 197 NGAVVEVAANYTRKKHV 247
AV EVA +Y +KKHV
Sbjct: 2271 KEAVCEVALDYKKKKHV 2287
>M37884-1|AAA63259.1| 1274|Homo sapiens muscle beta spectrin protein.
Length = 1274
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/77 (45%), Positives = 48/77 (62%)
Frame = +2
Query: 17 VEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDL 196
+EG L RKH+ E K+ASNRSW+ +Y V ++ + FYKD K + + GE P L
Sbjct: 1127 MEGYLGRKHDLEGPNKKASNRSWNNLYCVLRNSELTFYKDAK--NLALGMPYHGEEPLAL 1184
Query: 197 NGAVVEVAANYTRKKHV 247
A+ E+AANY +KKHV
Sbjct: 1185 RHAICEIAANYKKKKHV 1201
>AB209415-1|BAD92652.1| 2332|Homo sapiens spectrin, beta, erythrocytic
(includes spherocytosis, clinical type I) variant
protein.
Length = 2332
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/77 (45%), Positives = 48/77 (62%)
Frame = +2
Query: 17 VEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDL 196
+EG L RKH+ E K+ASNRSW+ +Y V ++ + FYKD K + + GE P L
Sbjct: 2185 MEGYLGRKHDLEGPNKKASNRSWNNLYCVLRNSELTFYKDAK--NLALGMPYHGEEPLAL 2242
Query: 197 NGAVVEVAANYTRKKHV 247
A+ E+AANY +KKHV
Sbjct: 2243 RHAICEIAANYKKKKHV 2259
>BC139788-1|AAI39789.1| 934|Homo sapiens SPTBN2 protein protein.
Length = 934
Score = 70.5 bits (165), Expect = 9e-13
Identities = 37/79 (46%), Positives = 47/79 (59%)
Frame = +2
Query: 11 EGVEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPF 190
E +EG L RK E E+ K+A+NRSW VY V + G + FYKD KA AS + GE P
Sbjct: 763 EQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKA--ASAGVPYHGEVPV 820
Query: 191 DLNGAVVEVAANYTRKKHV 247
L A VA +Y ++KHV
Sbjct: 821 SLARAQGSVAFDYRKRKHV 839
>AF026488-2|AAC79504.1| 228|Homo sapiens beta III spectrin protein.
Length = 228
Score = 70.5 bits (165), Expect = 9e-13
Identities = 37/79 (46%), Positives = 47/79 (59%)
Frame = +2
Query: 11 EGVEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPF 190
E +EG L RK E E+ K+A+NRSW VY V + G + FYKD KA AS + GE P
Sbjct: 82 EQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKA--ASAGVPYHGEVPV 139
Query: 191 DLNGAVVEVAANYTRKKHV 247
L A VA +Y ++KHV
Sbjct: 140 SLARAQGSVAFDYRKRKHV 158
>AF026488-1|AAC79503.1| 253|Homo sapiens beta III spectrin protein.
Length = 253
Score = 70.5 bits (165), Expect = 9e-13
Identities = 37/79 (46%), Positives = 47/79 (59%)
Frame = +2
Query: 11 EGVEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPF 190
E +EG L RK E E+ K+A+NRSW VY V + G + FYKD KA AS + GE P
Sbjct: 82 EQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKA--ASAGVPYHGEVPV 139
Query: 191 DLNGAVVEVAANYTRKKHV 247
L A VA +Y ++KHV
Sbjct: 140 SLARAQGSVAFDYRKRKHV 158
>AF026487-1|AAC79502.1| 491|Homo sapiens beta III spectrin protein.
Length = 491
Score = 70.5 bits (165), Expect = 9e-13
Identities = 37/79 (46%), Positives = 47/79 (59%)
Frame = +2
Query: 11 EGVEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPF 190
E +EG L RK E E+ K+A+NRSW VY V + G + FYKD KA AS + GE P
Sbjct: 320 EQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKA--ASAGVPYHGEVPV 377
Query: 191 DLNGAVVEVAANYTRKKHV 247
L A VA +Y ++KHV
Sbjct: 378 SLARAQGSVAFDYRKRKHV 396
>AB008567-1|BAA32700.1| 2390|Homo sapiens beta-spectrin III protein.
Length = 2390
Score = 70.5 bits (165), Expect = 9e-13
Identities = 37/79 (46%), Positives = 47/79 (59%)
Frame = +2
Query: 11 EGVEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPF 190
E +EG L RK E E+ K+A+NRSW VY V + G + FYKD KA AS + GE P
Sbjct: 2219 EQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKA--ASAGVPYHGEVPV 2276
Query: 191 DLNGAVVEVAANYTRKKHV 247
L A VA +Y ++KHV
Sbjct: 2277 SLARAQGSVAFDYRKRKHV 2295
>AY004226-2|AAF93172.1| 1307|Homo sapiens betaIV spectrin isoform
sigma3 protein.
Length = 1307
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +2
Query: 20 EGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDLN 199
EG L+RK E + A +++SNRSW +Y V G + FYKD K AS + GE L+
Sbjct: 1165 EGFLLRKRELD-ANRKSSNRSWVSLYCVLSKGELGFYKDSKG-PASGSTH-GGEPLLSLH 1221
Query: 200 GAVVEVAANYTRKKHV 247
A EVA++Y +KKHV
Sbjct: 1222 KATSEVASDYKKKKHV 1237
>AF324063-1|AAQ14860.1| 2564|Homo sapiens non-erythrocytic
beta-spectrin 4 protein.
Length = 2564
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +2
Query: 20 EGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDLN 199
EG L+RK E + A +++SNRSW +Y V G + FYKD K AS + GE L+
Sbjct: 2422 EGFLLRKRELD-ANRKSSNRSWVSLYCVLSKGELGFYKDSKG-PASGSTH-GGEPLLSLH 2478
Query: 200 GAVVEVAANYTRKKHV 247
A EVA++Y +KKHV
Sbjct: 2479 KATSEVASDYKKKKHV 2494
>AF311855-1|AAG42473.1| 2564|Homo sapiens spectrin beta IV protein.
Length = 2564
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +2
Query: 20 EGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDLN 199
EG L+RK E + A +++SNRSW +Y V G + FYKD K AS + GE L+
Sbjct: 2422 EGFLLRKRELD-ANRKSSNRSWVSLYCVLSKGELGFYKDSKG-PASGSTH-GGEPLLSLH 2478
Query: 200 GAVVEVAANYTRKKHV 247
A EVA++Y +KKHV
Sbjct: 2479 KATSEVASDYKKKKHV 2494
>AF082075-1|AAG38874.1| 2559|Homo sapiens beta4sigma1 spectrin
protein.
Length = 2559
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +2
Query: 20 EGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDLN 199
EG L+RK E + A +++SNRSW +Y V G + FYKD K AS + GE L+
Sbjct: 2417 EGFLLRKRELD-ANRKSSNRSWVSLYCVLSKGELGFYKDSKG-PASGSTH-GGEPLLSLH 2473
Query: 200 GAVVEVAANYTRKKHV 247
A EVA++Y +KKHV
Sbjct: 2474 KATSEVASDYKKKKHV 2489
>AF465439-1|AAL73492.1| 1028|Homo sapiens beta I spectrin form betaI
sigma3 protein.
Length = 1028
Score = 53.6 bits (123), Expect(2) = 3e-09
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +2
Query: 62 KRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDLNGAVVEVAANYTRKK 241
+ AS+ SW+ +Y V ++ + FYKD K + + GE P L A+ E+AANY +KK
Sbjct: 896 QHASHVSWNNLYCVLRNSELTFYKDAK--NLALGMPYHGEEPLALRHAICEIAANYKKKK 953
Query: 242 HV 247
HV
Sbjct: 954 HV 955
Score = 25.0 bits (52), Expect(2) = 3e-09
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 17 VEGTLVRKHEWESAAKRASN 76
+EG L RKH+ E K+ASN
Sbjct: 846 MEGYLGRKHDLEGPNKKASN 865
>BX537570-1|CAD97787.1| 1004|Homo sapiens hypothetical protein
protein.
Length = 1004
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +2
Query: 71 SNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDLNGAVVEVAANYTRKKHV 247
S R W ++YVV + + YKD K + +P + E P +N +++++ + T++K+V
Sbjct: 783 SIRPWKQMYVVLRGHSLYLYKD-KREQTTPSE---EEQPISVNACLIDISYSETKRKNV 837
>AL392104-1|CAI40176.1| 1957|Homo sapiens Rho GTPase activating
protein 21 protein.
Length = 1957
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +2
Query: 71 SNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDLNGAVVEVAANYTRKKHV 247
S R W ++YVV + + YKD K + +P + E P +N +++++ + T++K+V
Sbjct: 953 SIRPWKQMYVVLRGHSLYLYKD-KREQTTPSE---EEQPISVNACLIDISYSETKRKNV 1007
>AL355979-1|CAI14323.1| 1957|Homo sapiens Rho GTPase activating
protein 21 protein.
Length = 1957
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +2
Query: 71 SNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDLNGAVVEVAANYTRKKHV 247
S R W ++YVV + + YKD K + +P + E P +N +++++ + T++K+V
Sbjct: 953 SIRPWKQMYVVLRGHSLYLYKD-KREQTTPSE---EEQPISVNACLIDISYSETKRKNV 1007
>AF480466-1|AAM22955.1| 1957|Homo sapiens Rho-GTPase activating
protein 10 protein.
Length = 1957
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +2
Query: 71 SNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDLNGAVVEVAANYTRKKHV 247
S R W ++YVV + + YKD K + +P + E P +N +++++ + T++K+V
Sbjct: 953 SIRPWKQMYVVLRGHSLYLYKD-KREQTTPSE---EEQPISVNACLIDISYSETKRKNV 1007
>AB037845-1|BAA92662.2| 1944|Homo sapiens KIAA1424 protein protein.
Length = 1944
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +2
Query: 71 SNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDLNGAVVEVAANYTRKKHV 247
S R W ++YVV + + YKD K + +P + E P +N +++++ + T++K+V
Sbjct: 940 SIRPWKQMYVVLRGHSLYLYKD-KREQTTPSE---EEQPISVNACLIDISYSETKRKNV 994
>BC038976-1|AAH38976.2| 475|Homo sapiens Rho GTPase activating
protein 15 protein.
Length = 475
Score = 30.7 bits (66), Expect = 0.89
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 17 VEGTLVRKHEWESAAKRASN-----RSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGE 181
+E +V K + AK A ++W ++V R+ FYK+ K S +
Sbjct: 75 LEQLMVEKEGYLQKAKIADGGKKLRKNWSTSWIVLSSRRIEFYKESKQQALSNMKTGHKP 134
Query: 182 APFDLNGAVVEVAANYTRKKHV 247
DL GA +E A + +K+V
Sbjct: 135 ESVDLCGAHIEWAKEKSSRKNV 156
>BC016701-1|AAH16701.1| 475|Homo sapiens Rho GTPase activating
protein 15 protein.
Length = 475
Score = 30.7 bits (66), Expect = 0.89
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 17 VEGTLVRKHEWESAAKRASN-----RSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGE 181
+E +V K + AK A ++W ++V R+ FYK+ K S +
Sbjct: 75 LEQLMVEKEGYLQKAKIADGGKKLRKNWSTSWIVLSSRRIEFYKESKQQALSNMKTGHKP 134
Query: 182 APFDLNGAVVEVAANYTRKKHV 247
DL GA +E A + +K+V
Sbjct: 135 ESVDLCGAHIEWAKEKSSRKNV 156
>AY219338-1|AAO34684.1| 475|Homo sapiens ARHGAP15 protein.
Length = 475
Score = 30.7 bits (66), Expect = 0.89
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 17 VEGTLVRKHEWESAAKRASN-----RSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGE 181
+E +V K + AK A ++W ++V R+ FYK+ K S +
Sbjct: 75 LEQLMVEKEGYLQKAKIADGGKKLRKNWSTSWIVLSSRRIEFYKESKQQALSNMKTGHKP 134
Query: 182 APFDLNGAVVEVAANYTRKKHV 247
DL GA +E A + +K+V
Sbjct: 135 ESVDLCGAHIEWAKEKSSRKNV 156
>AC098857-1|AAX93245.1| 103|Homo sapiens unknown protein.
Length = 103
Score = 30.7 bits (66), Expect = 0.89
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 17 VEGTLVRKHEWESAAKRASN-----RSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGE 181
+E +V K + AK A ++W ++V R+ FYK+ K S +
Sbjct: 20 LEQLMVEKEGYLQKAKIADGGKKLRKNWSTSWIVLSSRRIEFYKESKQQALSNMKTGHKP 79
Query: 182 APFDLNGAVVEVAANYTRKKHV 247
DL GA +E A + +K+V
Sbjct: 80 ESVDLCGAHIEWAKEKSSRKNV 101
>BC101391-1|AAI01392.3| 521|Homo sapiens ARHGAP27 protein protein.
Length = 521
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +2
Query: 62 KRASNRSWDKVYVVAKDGRMAFYKDQKAYKA----SPDQYWRGEAPFDLNGAVVEVA 220
KR + W + V + G + F+KD K A P ++ E +L GA + A
Sbjct: 145 KRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWA 201
>BC101390-1|AAI01391.1| 548|Homo sapiens Rho GTPase activating
protein 27 protein.
Length = 548
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +2
Query: 62 KRASNRSWDKVYVVAKDGRMAFYKDQKAYKA----SPDQYWRGEAPFDLNGAVVEVA 220
KR + W + V + G + F+KD K A P ++ E +L GA + A
Sbjct: 172 KRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWA 228
>BC101389-1|AAI01390.1| 548|Homo sapiens Rho GTPase activating
protein 27 protein.
Length = 548
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +2
Query: 62 KRASNRSWDKVYVVAKDGRMAFYKDQKAYKA----SPDQYWRGEAPFDLNGAVVEVA 220
KR + W + V + G + F+KD K A P ++ E +L GA + A
Sbjct: 172 KRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWA 228
>BC101388-1|AAI01389.1| 548|Homo sapiens Rho GTPase activating
protein 27 protein.
Length = 548
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +2
Query: 62 KRASNRSWDKVYVVAKDGRMAFYKDQKAYKA----SPDQYWRGEAPFDLNGAVVEVA 220
KR + W + V + G + F+KD K A P ++ E +L GA + A
Sbjct: 172 KRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWA 228
>AK125535-1|BAC86196.1| 548|Homo sapiens protein ( Homo sapiens
cDNA FLJ43547 fis, clone PROST2016462. ).
Length = 548
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +2
Query: 62 KRASNRSWDKVYVVAKDGRMAFYKDQKAYKA----SPDQYWRGEAPFDLNGAVVEVA 220
KR + W + V + G + F+KD K A P ++ E +L GA + A
Sbjct: 172 KRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWA 228
>BC117135-1|AAI17136.1| 1233|Homo sapiens SEC24 related gene family,
member B (S. cerevisiae) protein.
Length = 1233
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 120 MRPSLATTYTLSQDLLEARLAADSHSCLRTNVPST 16
M P A L+ DL + + DS C TN+P T
Sbjct: 501 MTPVWAPVPNLNADLKKLNCSPDSFRCTLTNIPQT 535
>BC111728-1|AAI11729.1| 889|Homo sapiens oxysterol-binding
protein-like protein 8, isoform a protein.
Length = 889
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 65 RASNRSWDKVYVVAKDGRMAFYKDQK 142
R + +SW K++ V K G + YK QK
Sbjct: 158 RGTLKSWTKLWCVLKPGVLLIYKTQK 183
>BC101529-1|AAI01530.1| 889|Homo sapiens oxysterol binding
protein-like 8 protein.
Length = 889
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 65 RASNRSWDKVYVVAKDGRMAFYKDQK 142
R + +SW K++ V K G + YK QK
Sbjct: 158 RGTLKSWTKLWCVLKPGVLLIYKTQK 183
>BC093834-1|AAH93834.1| 889|Homo sapiens oxysterol binding
protein-like 8 protein.
Length = 889
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 65 RASNRSWDKVYVVAKDGRMAFYKDQK 142
R + +SW K++ V K G + YK QK
Sbjct: 158 RGTLKSWTKLWCVLKPGVLLIYKTQK 183
>BC082235-1|AAH82235.1| 728|Homo sapiens OSBPL8 protein protein.
Length = 728
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 65 RASNRSWDKVYVVAKDGRMAFYKDQK 142
R + +SW K++ V K G + YK QK
Sbjct: 158 RGTLKSWTKLWCVLKPGVLLIYKTQK 183
>BC040137-1|AAH40137.1| 1268|Homo sapiens SEC24 related gene family,
member B (S. cerevisiae) protein.
Length = 1268
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 120 MRPSLATTYTLSQDLLEARLAADSHSCLRTNVPST 16
M P A L+ DL + + DS C TN+P T
Sbjct: 536 MTPVWAPVPNLNADLKKLNCSPDSFRCTLTNIPQT 570
>AK055835-1|BAB71026.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ31273 fis, clone KIDNE2006299, weakly similar to
BOB1 PROTEIN. ).
Length = 420
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 65 RASNRSWDKVYVVAKDGRMAFYKDQK 142
R + +SW K++ V K G + YK QK
Sbjct: 145 RGTLKSWTKLWCVLKPGVLLIYKTQK 170
>AJ131245-1|CAA10335.1| 1268|Homo sapiens Sec24B protein protein.
Length = 1268
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 120 MRPSLATTYTLSQDLLEARLAADSHSCLRTNVPST 16
M P A L+ DL + + DS C TN+P T
Sbjct: 536 MTPVWAPVPNLNADLKKLNCSPDSFRCTLTNIPQT 570
>AF392452-1|AAL40665.1| 889|Homo sapiens oxysterol-binding
protein-like protein OSBPL8 protein.
Length = 889
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 65 RASNRSWDKVYVVAKDGRMAFYKDQK 142
R + +SW K++ V K G + YK QK
Sbjct: 158 RGTLKSWTKLWCVLKPGVLLIYKTQK 183
>AF323730-1|AAG53411.1| 536|Homo sapiens OSBP-related protein 8
protein.
Length = 536
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 65 RASNRSWDKVYVVAKDGRMAFYKDQK 142
R + +SW K++ V K G + YK QK
Sbjct: 116 RGTLKSWTKLWCVLKPGVLLIYKTQK 141
>AB040884-1|BAA95975.3| 939|Homo sapiens KIAA1451 protein protein.
Length = 939
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 65 RASNRSWDKVYVVAKDGRMAFYKDQK 142
R + +SW K++ V K G + YK QK
Sbjct: 208 RGTLKSWTKLWCVLKPGVLLIYKTQK 233
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,196,331
Number of Sequences: 237096
Number of extensions: 517986
Number of successful extensions: 1407
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1392
length of database: 76,859,062
effective HSP length: 60
effective length of database: 62,633,302
effective search space used: 1377932644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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