Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_M06
(249 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 77 2e-15
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 77 2e-15
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 77 2e-15
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 77 2e-15
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 77 2e-15
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 33 0.035
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 33 0.035
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 33 0.035
Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical pr... 31 0.082
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 27 1.3
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 27 1.8
Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical pr... 27 2.3
AC024750-2|AAF60439.1| 234|Caenorhabditis elegans Hypothetical ... 26 4.1
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 25 5.4
U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center... 25 7.1
U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily ass... 25 7.1
U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily ass... 25 7.1
AC025726-14|AAK73912.2| 508|Caenorhabditis elegans Hypothetical... 25 7.1
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 76.6 bits (180), Expect = 2e-15
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +2
Query: 5 EDEGVEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEA 184
+ E EGTL+RKH +ES ++A+NRSW+K+Y V + ++FYKD K D+ GE
Sbjct: 2116 QGEAFEGTLIRKHTYESLDRKAANRSWEKLYAVLRQNELSFYKDPK----HRDESVHGEP 2171
Query: 185 PFDLNGAVVEVAANYTRKKHV 247
P L G V VA++Y +KK+V
Sbjct: 2172 PMALPGCSVNVASDYQKKKNV 2192
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 76.6 bits (180), Expect = 2e-15
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +2
Query: 5 EDEGVEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEA 184
+ E EGTL+RKH +ES ++A+NRSW+K+Y V + ++FYKD K D+ GE
Sbjct: 2161 QGEAFEGTLIRKHTYESLDRKAANRSWEKLYAVLRQNELSFYKDPK----HRDESVHGEP 2216
Query: 185 PFDLNGAVVEVAANYTRKKHV 247
P L G V VA++Y +KK+V
Sbjct: 2217 PMALPGCSVNVASDYQKKKNV 2237
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 76.6 bits (180), Expect = 2e-15
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +2
Query: 5 EDEGVEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEA 184
+ E EGTL+RKH +ES ++A+NRSW+K+Y V + ++FYKD K D+ GE
Sbjct: 2116 QGEAFEGTLIRKHTYESLDRKAANRSWEKLYAVLRQNELSFYKDPK----HRDESVHGEP 2171
Query: 185 PFDLNGAVVEVAANYTRKKHV 247
P L G V VA++Y +KK+V
Sbjct: 2172 PMALPGCSVNVASDYQKKKNV 2192
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 76.6 bits (180), Expect = 2e-15
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +2
Query: 5 EDEGVEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEA 184
+ E EGTL+RKH +ES ++A+NRSW+K+Y V + ++FYKD K D+ GE
Sbjct: 2116 QGEAFEGTLIRKHTYESLDRKAANRSWEKLYAVLRQNELSFYKDPK----HRDESVHGEP 2171
Query: 185 PFDLNGAVVEVAANYTRKKHV 247
P L G V VA++Y +KK+V
Sbjct: 2172 PMALPGCSVNVASDYQKKKNV 2192
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 76.6 bits (180), Expect = 2e-15
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +2
Query: 5 EDEGVEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEA 184
+ E EGTL+RKH +ES ++A+NRSW+K+Y V + ++FYKD K D+ GE
Sbjct: 2161 QGEAFEGTLIRKHTYESLDRKAANRSWEKLYAVLRQNELSFYKDPK----HRDESVHGEP 2216
Query: 185 PFDLNGAVVEVAANYTRKKHV 247
P L G V VA++Y +KK+V
Sbjct: 2217 PMALPGCSVNVASDYQKKKNV 2237
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 32.7 bits (71), Expect = 0.035
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = +2
Query: 17 VEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDL 196
++G RK +S KRA+ RSW Y + + F+KD++ + + P +
Sbjct: 3677 MKGFFDRKQCQQSGGKRATIRSWKNYYGILCGQLLCFFKDEQQFLENV----AAAPPVYI 3732
Query: 197 NGAVVEVAANYTRKKH 244
GA E Y ++K+
Sbjct: 3733 YGAQCEQYPEYAKRKN 3748
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 32.7 bits (71), Expect = 0.035
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = +2
Query: 17 VEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDL 196
++G RK +S KRA+ RSW Y + + F+KD++ + + P +
Sbjct: 3677 MKGFFDRKQCQQSGGKRATIRSWKNYYGILCGQLLCFFKDEQQFLENV----AAAPPVYI 3732
Query: 197 NGAVVEVAANYTRKKH 244
GA E Y ++K+
Sbjct: 3733 YGAQCEQYPEYAKRKN 3748
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 32.7 bits (71), Expect = 0.035
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = +2
Query: 17 VEGTLVRKHEWESAAKRASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDL 196
++G RK +S KRA+ RSW Y + + F+KD++ + + P +
Sbjct: 3677 MKGFFDRKQCQQSGGKRATIRSWKNYYGILCGQLLCFFKDEQQFLENV----AAAPPVYI 3732
Query: 197 NGAVVEVAANYTRKKH 244
GA E Y ++K+
Sbjct: 3733 YGAQCEQYPEYAKRKN 3748
>Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical
protein C38D4.5 protein.
Length = 837
Score = 31.5 bits (68), Expect = 0.082
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +2
Query: 23 GTLVRKHEWESAAK--RASNRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDL 196
G L R E A K + R W Y+ + YKDQK+ + Y + +DL
Sbjct: 391 GDLERSENDEPAEKVVKPKKREWITNYMYLTTAHLILYKDQKSAEKHGKHYDAPQGVWDL 450
Query: 197 NGAVV 211
GA V
Sbjct: 451 RGASV 455
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 27.5 bits (58), Expect = 1.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 8 DEGVEGTLVRKHEWESAAKRASNRSWD 88
DE ++ ++R W K+A+NR WD
Sbjct: 1952 DEMLDTIVLRNPNWSIEEKKAANRYWD 1978
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -1
Query: 114 PSLATTYTLSQDLL--EARLAADSHSCLRTNVPSTPSSS 4
PS+A++ + D L +A+ A S+SC +PS P S+
Sbjct: 466 PSIASSISFDYDCLAKDAKSARRSNSCPPIEIPSPPPSN 504
>Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 65 RASNRSWDKVYVVAKDGRMAFYKDQKA 145
R + + W++ Y V K G + YK +KA
Sbjct: 49 RGALKRWNRYYCVLKPGLLILYKHKKA 75
>Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 65 RASNRSWDKVYVVAKDGRMAFYKDQKA 145
R + + W++ Y V K G + YK +KA
Sbjct: 49 RGALKRWNRYYCVLKPGLLILYKHKKA 75
>Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical
protein ZK1086.1b protein.
Length = 770
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 65 RASNRSWDKVYVVAKDGRMAFYKDQKA 145
R + + W++ Y V K G + YK +KA
Sbjct: 86 RGALKRWNRYYCVLKPGLLILYKHKKA 112
>AC024750-2|AAF60439.1| 234|Caenorhabditis elegans Hypothetical
protein Y17G9A.3 protein.
Length = 234
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 29 LVRKHEWESAAKRASNRSWDKVYVVAKD 112
+ R H W S +KRA N ++V ++ +
Sbjct: 134 IYRSHYWRSTSKRAKNNIENEVKIICAE 161
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +2
Query: 74 NRSWDKVYVVAKDGRMAFYKDQKAYKASPDQYWRGEAPFDLN 199
N W K Y+ K+GR+ + A +A + A D N
Sbjct: 79 NEGWMKQYIRMKEGRLQIFASHYAGEAPAQELVLSGADVDAN 120
>U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center
kinase family protein1, isoform a protein.
Length = 653
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/32 (25%), Positives = 18/32 (56%)
Frame = +2
Query: 83 WDKVYVVAKDGRMAFYKDQKAYKASPDQYWRG 178
WD++Y+ D + F K ++ + S + ++G
Sbjct: 20 WDRIYIQKLDPEVIFTKQERIGRGSFGEVYKG 51
>U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform b protein.
Length = 286
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 155 SPDQYWRGEAPFDLNGAVVEVAANYTRK 238
S D +W+GEAP NG V +NY +
Sbjct: 35 STDGWWKGEAP---NGGVGWFPSNYVEE 59
>U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform a protein.
Length = 395
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 155 SPDQYWRGEAPFDLNGAVVEVAANYTRK 238
S D +W+GEAP NG V +NY +
Sbjct: 147 STDGWWKGEAP---NGGVGWFPSNYVEE 171
>AC025726-14|AAK73912.2| 508|Caenorhabditis elegans Hypothetical
protein Y71G12B.13 protein.
Length = 508
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 126 NAMRPSLATTYTLSQDLL-EARLAADSHSCLRTNVPSTPSSSC 1
N++ + TT T+S+ + RL A+S N +TPS+SC
Sbjct: 121 NSLDGTTTTTTTISEKSSGQNRLKAESLHSETVNNTNTPSTSC 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,993,008
Number of Sequences: 27780
Number of extensions: 74841
Number of successful extensions: 236
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 12,740,198
effective HSP length: 62
effective length of database: 11,017,838
effective search space used: 220356760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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