Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_M03
(605 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 27 0.11
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 26 0.25
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 25 0.58
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 25 0.58
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 25 0.58
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 25 0.58
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 25 0.58
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 25 0.58
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 25 0.58
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 25 0.58
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 25 0.58
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 25 0.58
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 25 0.58
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 25 0.58
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 25 0.58
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 25 0.58
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 25 0.58
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 0.58
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 24 1.0
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 24 1.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 1.3
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 24 1.3
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 3.1
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 5.4
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 5.4
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 21 7.1
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 7.1
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 27.5 bits (58), Expect = 0.11
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 502 RTSPSRAGRECASPSRRSGTSAS 570
+TSP+ A R+C SP SG S S
Sbjct: 581 KTSPNSAVRKCMSPINGSGASGS 603
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +2
Query: 452 VRDQVKQRVHNRQ----WHEGVHLPP 517
+ D +KQ+ R+ W EGVH+ P
Sbjct: 982 LEDSMKQQYGKRRKEPPWLEGVHVTP 1007
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 26.2 bits (55), Expect = 0.25
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +2
Query: 155 SQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLR 334
SQ + RR+ E A PG+ R + P P P H RL L + V +
Sbjct: 106 SQPRPPHPRLRREAEPE-AEPGNNRPVYIPQPRPPH--PRLRREAELEAEPGNNRPVYIS 162
Query: 335 QPLHDHRR 358
QP H R
Sbjct: 163 QPRPPHPR 170
Score = 25.8 bits (54), Expect = 0.33
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = +2
Query: 188 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRR 358
R + A PG+ R + P P P H RL L + V + QP H R
Sbjct: 60 RREAEPEAEPGNNRPVYIPQPRPPH--PRLRREAELEAEPGNNRPVYISQPRPPHPR 114
Score = 24.2 bits (50), Expect = 1.0
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = +2
Query: 155 SQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLR 334
SQ + RR+ E A PG+ R + P P P H R A ++ +
Sbjct: 162 SQPRPPHPRLRREAEPE-AEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQP 220
Query: 335 QPLHDHRRQES 367
+P H R+E+
Sbjct: 221 RPPHPRLRREA 231
Score = 23.8 bits (49), Expect = 1.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +2
Query: 185 RRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQE 364
RR+ E A PG+ R + P P P H R A ++ + +P H R+E
Sbjct: 32 RREAKPE-AEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRRE 90
Query: 365 S 367
+
Sbjct: 91 A 91
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 188 RDRPQERAVPGDARRAHAPVPGPAH 262
R + A PG+ R + P P P H
Sbjct: 228 RREAEPEAEPGNNRPVYIPQPRPPH 252
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 185 RRDRPQERAVPGDARRAHAPVPGPAH 262
RR+ E A PG+ R + P P P H
Sbjct: 256 RREAKPE-AKPGNNRPVYIPQPRPPH 280
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 145
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 145
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 145
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 145
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 145
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 145
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 117 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 145
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 394
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 394
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 394
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 394
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 394
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 394
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 365 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 393
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 350 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 378
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 409 PGWRSRETMVPTRPRFLPPVIMQRLPESN 323
PG R + P PRF+PP + + P N
Sbjct: 366 PGSRHIGPLTPFPPRFIPPDMYRLRPPPN 394
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 24.2 bits (50), Expect = 1.0
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 188 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQE 364
R + +A PG+ R + P P P H R A ++ + +P H R+E
Sbjct: 61 RREAEPKAEPGNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRRE 119
Score = 23.8 bits (49), Expect = 1.3
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +2
Query: 185 RRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQE 364
RR+ E A PG+ R + P P P H R A ++ + +P H R+E
Sbjct: 33 RREAKPE-AEPGNNRPIYIPQPRPPHPRLRREAEPKAEPGNNRPIYIPQPRPPHPRLRRE 91
Query: 365 SGS 373
+ S
Sbjct: 92 AES 94
Score = 23.0 bits (47), Expect = 2.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 188 RDRPQERAVPGDARRAHAPVPGPAH 262
R R + A PG+ R + P P P H
Sbjct: 115 RLRREPEAEPGNNRPVYIPQPRPPH 139
Score = 23.0 bits (47), Expect = 2.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 188 RDRPQERAVPGDARRAHAPVPGPAH 262
R R + A PG+ R + P P P H
Sbjct: 141 RLRREPEAEPGNNRPVYIPQPRPPH 165
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 23.8 bits (49), Expect = 1.3
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = +2
Query: 188 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQES 367
R + A PG+ R + P P P H R A ++ + +P H R+E+
Sbjct: 33 RREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREA 92
Score = 22.6 bits (46), Expect = 3.1
Identities = 16/57 (28%), Positives = 21/57 (36%)
Frame = +2
Query: 188 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRR 358
R + A PG+ R + P P P H RL + V + QP H R
Sbjct: 89 RREAEPEAEPGNNRPVYIPQPRPPH--PRLRREAEPEAEPGNNRPVYIPQPRPPHPR 143
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.8 bits (49), Expect = 1.3
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 249 PDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLG 371
PD L + LD+ N+I +F NL +TG R +G
Sbjct: 447 PDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGLRLIG 487
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 23.8 bits (49), Expect = 1.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +2
Query: 185 RRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQE 364
RR+ E A PG+ R + P P P H R A ++ + +P H R+E
Sbjct: 4 RREAKPE-AEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRRE 62
Query: 365 S 367
+
Sbjct: 63 A 63
Score = 23.8 bits (49), Expect = 1.3
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = +2
Query: 188 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQES 367
R + A PG+ R + P P P H R A ++ + +P H R+E+
Sbjct: 32 RREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREA 91
Score = 23.8 bits (49), Expect = 1.3
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = +2
Query: 188 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQES 367
R + A PG+ R + P P P H R A ++ + +P H R+E+
Sbjct: 88 RREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREA 147
Score = 22.6 bits (46), Expect = 3.1
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +2
Query: 185 RRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRR 358
RR+ E A PG+ R + P P P H RL + V + QP H R
Sbjct: 144 RREAKPE-AEPGNNRPVYIPQPRPPH--PRLRREAEPEAEPGNNRPVYIPQPRPPHPR 198
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 3.1
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 487 AMARRRTSPSRAGRECASPSRRSGTSASQRRSPDS 591
A A TSPS G +SPS S +S SP S
Sbjct: 73 AAAITSTSPSYPGGGSSSPSPSSPSSFFSSVSPTS 107
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 5.4
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = +3
Query: 408 GSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPR 521
G F VHV T F T + + + YI L R
Sbjct: 271 GDFQPVHVHKQTAIAFRTPTYRMQQVEQPVQVYIQLKR 308
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 5.4
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = +3
Query: 408 GSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPR 521
G F VHV T F T + + + YI L R
Sbjct: 271 GDFQPVHVHKQTAIAFRTPTYRMQQVEQPVQVYIQLKR 308
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 21.4 bits (43), Expect = 7.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 506 HLPPAREGSAPHHRGGAGQAHRSEGRRTVA 595
H P+ GS+P H G + A S RT +
Sbjct: 59 HNSPSPTGSSPQHSGSS--ASTSPAARTTS 86
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 254 PAHQGERLGAARHLHQQDHG 313
P ++ + A + HQQDHG
Sbjct: 82 PYNRMDMRNATYYQHQQDHG 101
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,472
Number of Sequences: 438
Number of extensions: 4266
Number of successful extensions: 47
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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