Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_M01
         (527 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118719-1|AAM50579.1|  512|Drosophila melanogaster AT29177p pro...    28   9.0  
AF050630-1|AAD09205.1|  884|Drosophila melanogaster Ahr homolog ...    28   9.0  
AE014297-2199|AAF55308.1|  884|Drosophila melanogaster CG6993-PA...    28   9.0  

>AY118719-1|AAM50579.1|  512|Drosophila melanogaster AT29177p
           protein.
          Length = 512

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -2

Query: 352 PACY*RSHSHMNWRNSRQSSTVFITLRSHHENACYY*YKHSHYRPEH 212
           P  +   H H +   + Q S+   T  S+ + + Y+ Y H H  P H
Sbjct: 445 PHSHHHHHHHHHHETAHQHSSEVWTPASYTQYSQYFTYHHPHPHPHH 491


>AF050630-1|AAD09205.1|  884|Drosophila melanogaster Ahr homolog
           spineless protein.
          Length = 884

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -2

Query: 352 PACY*RSHSHMNWRNSRQSSTVFITLRSHHENACYY*YKHSHYRPEH 212
           P  +   H H +   + Q S+   T  S+ + + Y+ Y H H  P H
Sbjct: 817 PHSHHHHHHHHHHETAHQHSSEVWTPASYTQYSQYFTYHHPHPHPHH 863


>AE014297-2199|AAF55308.1|  884|Drosophila melanogaster CG6993-PA
           protein.
          Length = 884

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -2

Query: 352 PACY*RSHSHMNWRNSRQSSTVFITLRSHHENACYY*YKHSHYRPEH 212
           P  +   H H +   + Q S+   T  S+ + + Y+ Y H H  P H
Sbjct: 817 PHSHHHHHHHHHHETAHQHSSEVWTPASYTQYSQYFTYHHPHPHPHH 863


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,712,342
Number of Sequences: 53049
Number of extensions: 331559
Number of successful extensions: 1090
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)