Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_L23
         (543 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41021-5|AAA82335.2|  652|Caenorhabditis elegans Hypothetical pr...    31   0.41 
AY887908-1|AAX34420.1|  652|Caenorhabditis elegans anion transpo...    31   0.41 
Z70757-2|CAA94798.1|  611|Caenorhabditis elegans Hypothetical pr...    29   2.2  
DQ178244-1|ABA18183.1|  521|Caenorhabditis elegans putative sulf...    29   2.2  
AY954525-1|AAX34433.1|  611|Caenorhabditis elegans anion transpo...    29   2.2  
AY887917-1|AAX34429.1|  611|Caenorhabditis elegans anion transpo...    29   2.2  
U28929-2|AAN63411.1|  306|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z81560-7|CAB76737.2|  188|Caenorhabditis elegans Hypothetical pr...    27   6.6  

>U41021-5|AAA82335.2|  652|Caenorhabditis elegans Hypothetical
           protein F14D12.5 protein.
          Length = 652

 Score = 31.5 bits (68), Expect = 0.41
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 307 IASWATLANSITLVGPWIACVPLCVLGPLVPSTLNSLAK 191
           I S   +A  IT +GP++A +P C+L  +V   L S+ +
Sbjct: 391 ITSACFMALVITTIGPYLASLPSCILSAIVIVVLESMLR 429


>AY887908-1|AAX34420.1|  652|Caenorhabditis elegans anion
           transporter SULP-2 protein.
          Length = 652

 Score = 31.5 bits (68), Expect = 0.41
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 307 IASWATLANSITLVGPWIACVPLCVLGPLVPSTLNSLAK 191
           I S   +A  IT +GP++A +P C+L  +V   L S+ +
Sbjct: 391 ITSACFMALVITTIGPYLASLPSCILSAIVIVVLESMLR 429


>Z70757-2|CAA94798.1|  611|Caenorhabditis elegans Hypothetical
           protein ZK287.2 protein.
          Length = 611

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -3

Query: 310 SIASWATLANSITLVGPWIACVPLCVLGPLVPSTLNSL---AKFSPPLFKI 167
           +I S   L   I L+GP++  +P+C+L  +V  +L SL    K  P L++I
Sbjct: 383 TIFSSFLLLTVILLLGPFLEPLPMCILACIVIVSLKSLFMQVKELPRLYRI 433


>DQ178244-1|ABA18183.1|  521|Caenorhabditis elegans putative sulfate
           transporter prestinprotein.
          Length = 521

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -3

Query: 310 SIASWATLANSITLVGPWIACVPLCVLGPLVPSTLNSL---AKFSPPLFKI 167
           +I S   L   I L+GP++  +P+C+L  +V  +L SL    K  P L++I
Sbjct: 293 TIFSSFLLLTVILLLGPFLEPLPMCILACIVIVSLKSLFMQVKELPRLYRI 343


>AY954525-1|AAX34433.1|  611|Caenorhabditis elegans anion
           transporter SULP-8a protein.
          Length = 611

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -3

Query: 310 SIASWATLANSITLVGPWIACVPLCVLGPLVPSTLNSL---AKFSPPLFKI 167
           +I S   L   I L+GP++  +P+C+L  +V  +L SL    K  P L++I
Sbjct: 383 TIFSSFLLLTVILLLGPFLEPLPMCILACIVIVSLKSLFMQVKELPRLYRI 433


>AY887917-1|AAX34429.1|  611|Caenorhabditis elegans anion
           transporter SULP-8b protein.
          Length = 611

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -3

Query: 310 SIASWATLANSITLVGPWIACVPLCVLGPLVPSTLNSL---AKFSPPLFKI 167
           +I S   L   I L+GP++  +P+C+L  +V  +L SL    K  P L++I
Sbjct: 383 TIFSSFLLLTVILLLGPFLEPLPMCILACIVIVSLKSLFMQVKELPRLYRI 433


>U28929-2|AAN63411.1|  306|Caenorhabditis elegans Hypothetical
           protein F09C12.8 protein.
          Length = 306

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 420 WV-LVNQIPKFVFSVLDTNMDNYFVHR 497
           WV   +Q+P   +  L T  ++YFVHR
Sbjct: 279 WVPAAHQVPSVTYEFLTTKYNHYFVHR 305


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +3

Query: 420 WVLVNQIPKFVFSVLDTNM--DNYFVHRCNIQEL 515
           W  V  +P+ V   ++  +  D +  HRCNI ++
Sbjct: 502 WKSVESVPRLVDDYMNKKLLIDEFITHRCNIDDI 535


>Z81560-7|CAB76737.2|  188|Caenorhabditis elegans Hypothetical
           protein K02E2.8a protein.
          Length = 188

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 253 ACVPLCVLGPLVPSTLNSLAKFSPPLFKICVSTEN 149
           AC+P   + PL P T+ +    S P   + ++T N
Sbjct: 13  ACIPTQFVTPLNPGTITTTTTISAPTTTVPITTTN 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,327,705
Number of Sequences: 27780
Number of extensions: 248435
Number of successful extensions: 718
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)