Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_L22
(607 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 146 2e-35
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 146 2e-35
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 146 2e-35
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 146 2e-35
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 146 2e-35
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 146 bits (354), Expect = 2e-35
Identities = 70/111 (63%), Positives = 81/111 (72%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPXPKRPNTLRAGTN 512
TA LFK+LEKYRPE+ D K+P+ + AGTN
Sbjct: 96 TAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTN 146
Score = 36.7 bits (81), Expect = 0.025
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 526 LFRRRRHSLWSFAHDVDPIELVLFLPA 606
L +++ L AHDVDP+ELVLFLPA
Sbjct: 151 LIEQKKAQLVVIAHDVDPLELVLFLPA 177
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 146 bits (354), Expect = 2e-35
Identities = 70/111 (63%), Positives = 81/111 (72%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPXPKRPNTLRAGTN 512
TA LFK+LEKYRPE+ D K+P+ + AGTN
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTN 146
Score = 36.7 bits (81), Expect = 0.025
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 526 LFRRRRHSLWSFAHDVDPIELVLFLPA 606
L +++ L AHDVDP+ELVLFLPA
Sbjct: 151 LIEQKKAQLVVIAHDVDPLELVLFLPA 177
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 146 bits (354), Expect = 2e-35
Identities = 70/111 (63%), Positives = 81/111 (72%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPXPKRPNTLRAGTN 512
TA LFK+LEKYRPE+ D K+P+ + AGTN
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTN 146
Score = 36.7 bits (81), Expect = 0.025
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 526 LFRRRRHSLWSFAHDVDPIELVLFLPA 606
L +++ L AHDVDP+ELVLFLPA
Sbjct: 151 LIEQKKAQLVVIAHDVDPLELVLFLPA 177
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 146 bits (354), Expect = 2e-35
Identities = 70/111 (63%), Positives = 81/111 (72%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPXPKRPNTLRAGTN 512
TA LFK+LEKYRPE+ D K+P+ + AGTN
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTN 146
Score = 36.7 bits (81), Expect = 0.025
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 526 LFRRRRHSLWSFAHDVDPIELVLFLPA 606
L +++ L AHDVDP+ELVLFLPA
Sbjct: 151 LIEQKKAQLVVIAHDVDPLELVLFLPA 177
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 146 bits (354), Expect = 2e-35
Identities = 70/111 (63%), Positives = 81/111 (72%)
Frame = +3
Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 360 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPXPKRPNTLRAGTN 512
TA LFK+LEKYRPE+ D K+P+ + AGTN
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTN 146
Score = 36.7 bits (81), Expect = 0.025
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 526 LFRRRRHSLWSFAHDVDPIELVLFLPA 606
L +++ L AHDVDP+ELVLFLPA
Sbjct: 151 LIEQKKAQLVVIAHDVDPLELVLFLPA 177
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,661,390
Number of Sequences: 53049
Number of extensions: 457186
Number of successful extensions: 1113
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -