Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_L21
(535 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 63 1e-10
11_01_0750 - 6315126-6315896,6316371-6316784 62 4e-10
11_01_0767 + 6438648-6438809,6439146-6440000 60 1e-09
01_06_0824 - 32243495-32244319,32244449-32244859 58 4e-09
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 56 2e-08
01_01_1152 + 9170628-9171899 54 7e-08
11_01_0771 + 6453130-6454488 48 6e-06
11_02_0011 - 7337618-7338496,7338596-7338991 46 1e-05
11_02_0012 - 7346282-7347136,7347234-7347593 45 4e-05
05_06_0044 - 25150322-25151260 43 1e-04
11_02_0014 - 7352619-7352918,7353173-7353418 42 2e-04
06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274,904... 31 0.77
02_05_0622 + 30437533-30437577,30437694-30438177,30438301-304383... 31 0.77
11_01_0458 + 3536162-3537794,3537905-3538272 30 1.3
04_04_0527 + 25962541-25962548,25965434-25965502,25965997-259660... 29 2.4
08_01_0978 + 9841441-9842169,9842303-9842590,9842768-9843612,984... 29 3.1
06_03_0813 - 24853119-24854480,24854711-24855442,24855556-248559... 29 3.1
12_02_1244 + 27302715-27302754,27302865-27302936,27303250-273034... 28 4.1
10_08_0960 - 21853010-21853282,21854078-21854449,21854555-218548... 28 4.1
03_03_0206 + 15447054-15447181,15448243-15448298,15448373-154485... 28 5.4
04_04_1055 + 30444235-30446649 27 7.2
12_02_0674 - 21745321-21746223,21746229-21747608 27 9.5
08_01_1069 + 10916376-10916448,10917331-10918031,10918222-109184... 27 9.5
07_03_0631 + 20104332-20106802,20106904-20107030,20107352-201074... 27 9.5
03_02_0969 - 12795413-12795475,12795672-12795744,12796011-127961... 27 9.5
02_02_0661 - 12731005-12731238,12732756-12732884,12732969-127331... 27 9.5
01_06_0605 + 30548588-30548732,30549004-30549094,30549470-305495... 27 9.5
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 63.3 bits (147), Expect = 1e-10
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Frame = +3
Query: 84 ETIDFSDTKKAADI---INQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVP 254
E I + KAA++ +N W + T G IK + ++D L N ++F+G W
Sbjct: 200 EPITHWTSGKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEK 259
Query: 255 FNASETIKKDFHVDSTTVVKKPTMHLLQSLFYTENKELGARLVELPYKES----DFRMVV 422
F+AS+T +FH+ V+ P M + + L ++++LPY++ F M +
Sbjct: 260 FDASKTKDGEFHLLDGKSVQAPFMSTSKKQYILSYDNL--KVLKLPYQQGGDKRQFSMYI 317
Query: 423 ILPDKLEGLSSVLEK 467
+LP+ +GL S+ EK
Sbjct: 318 LLPEAQDGLWSLAEK 332
Score = 60.5 bits (140), Expect = 8e-10
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Frame = +3
Query: 126 INQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDFHVDSTT 305
+N W + T G IK+ + +I+ N L N ++F+G W F+ S+T +FH+
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGE 528
Query: 306 VVKKPTMHLLQSLFYTENKELGARLVELPYKES----DFRMVVILPDKLEGLSSVLEK 467
V+ P M + + + L ++++LPY + F M ++LP+ +GL S+ EK
Sbjct: 529 SVQAPFMSTRKKQYLSSYDSL--KVLKLPYLQGGDKRQFSMYILLPEAQDGLWSLAEK 584
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 61.7 bits (143), Expect = 4e-10
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Frame = +3
Query: 69 YQSEVETIDFSDTKK-AADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHW 245
Y S + DF + + A D IN W + T+G + + + TID N L + ++F+G W
Sbjct: 126 YGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRW 185
Query: 246 HVPFNASETIKKDFHVDSTTVVKKPTMHLLQSLFYTENKELGARLVELPYK----ESDFR 413
+ T ++ F+ T V+ P + ++ + + ++++LPYK E F
Sbjct: 186 LDRDDLRRTTEQKFYCLDGTSVEVPFVEYDRTRLFAVHDNF--KVIKLPYKQGKNERKFS 243
Query: 414 MVVILPDKLEGLSSVLEK 467
M + LPD +GL + +K
Sbjct: 244 MYIFLPDDHDGLFELTQK 261
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 59.7 bits (138), Expect = 1e-09
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Frame = +3
Query: 69 YQSEVETIDFSDTK-KAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHW 245
Y+ T+DF + +A IN W T+ I I ++ + + N I+F+G W
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
Query: 246 HVPFNASETIKKDFHVDSTTVVKKPTMHLLQSLFYTENKELGARLVELPYKES------- 404
PF+ S+T +++F + V+ P M ++ G R++ LPYK +
Sbjct: 102 LAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPYKATSDTYNLK 161
Query: 405 ------DFRMVVILPDKLEGLSSVLEK-AAEKGLIDD 494
F M+V LPD +GL +L++ A +D+
Sbjct: 162 LRYSLPSFAMLVFLPDDRDGLPGLLDRITASPEFVDE 198
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 58.0 bits (134), Expect = 4e-09
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Frame = +3
Query: 66 QYQSEVETIDFSDT-KKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGH 242
+Y++E + F D ++A IN+W T G IK + D +D A L N ++F+G
Sbjct: 124 KYRAEARPVSFRDKLEEARREINEWFESATAGRIKDFLPKDAVDRATPAVLGNALYFKGD 183
Query: 243 WHVPFNASETIKKDFHVDSTTVVKKPTMHLLQSLFYTENKELGARLVELPYKESD----- 407
W F+A T F++ V P M + + G +++ LPY
Sbjct: 184 WESKFDARSTSDDVFYLPDGGHVSAPFMSSGKWQYIA--CRAGYKVLRLPYARGGRGRGR 241
Query: 408 -----FRMVVILPDKLEGLSSVLEK 467
F M + LPD+ GL +L K
Sbjct: 242 DTGRLFSMYIYLPDERHGLPDMLRK 266
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 56.0 bits (129), Expect = 2e-08
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Frame = +3
Query: 111 KAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDFH 290
+ A +N W + T G IK + ++D L N ++F+G W F+AS+T +F
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFR 63
Query: 291 VDSTTVVKKPTMHLLQSLFYTENKELGARLVELPYKES----DFRMVVILPDKLEGLSSV 458
+ V P M + + + L ++++LPY++ F M ++LP+ +GL S+
Sbjct: 64 LLDGKSVLAPFMSTSKKQYLSSYDSL--KVLKLPYQKGRDLRQFSMYILLPEAQDGLWSL 121
Query: 459 LEK 467
K
Sbjct: 122 AAK 124
>01_01_1152 + 9170628-9171899
Length = 423
Score = 54.0 bits (124), Expect = 7e-08
Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Frame = +3
Query: 12 IYVGNKYTLDEKFT-SSSRQYQSEVETIDFS-DTKKAADIINQWANEKTRGHIKSPISDD 185
++V L +F +++ +Y + E DF+ ++A + +N + ++ T G I+ + +
Sbjct: 123 VWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIRDVLPPN 182
Query: 186 TIDPNAAAALFNVIFFQGHWHVPFNASETIKKDFHVDSTTVVKKPTM 326
++D + L N + F+G W +PF+ S T FH+ V+ P M
Sbjct: 183 SVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFM 229
>11_01_0771 + 6453130-6454488
Length = 452
Score = 47.6 bits (108), Expect = 6e-06
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +3
Query: 108 KKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDF 287
++A IN WA T I + ++ P A L N I+F+G W PFN S+T +K F
Sbjct: 171 EEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPF 230
Query: 288 H 290
+
Sbjct: 231 Y 231
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +3
Query: 69 YQSEVETIDFS-DTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHW 245
Y++ +F K++ IN+W ++ T I + D ++ + A L N I+F+G W
Sbjct: 120 YKAVTRAANFQRQPKRSRKKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKW 179
Query: 246 HVPFNASETIKKDFHVDSTTVVKKPTMHLLQSLFYTENKELGARLVELPY 395
PF S T FH + V P M + + + G +++LPY
Sbjct: 180 SNPFPRSSTTTGKFHRLDGSSVDVPFMSSREDQYIGFHD--GFTVLKLPY 227
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/96 (27%), Positives = 43/96 (44%)
Frame = +3
Query: 108 KKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKKDF 287
K + IN+W ++ T I+ + D ++ A L N I+F+G W PF T F
Sbjct: 122 KSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKF 181
Query: 288 HVDSTTVVKKPTMHLLQSLFYTENKELGARLVELPY 395
H + V P M + + G ++++LPY
Sbjct: 182 HRLDGSSVDAPFMSSREDQYIGFYD--GFKVLKLPY 215
>05_06_0044 - 25150322-25151260
Length = 312
Score = 43.2 bits (97), Expect = 1e-04
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 19/135 (14%)
Frame = +3
Query: 126 INQWANEKTRGHIKSPIS---DDTIDPN--------AAAALFNVIFFQGHWHVPFNASET 272
IN+W + +T G +K +S DD D + A+ L N ++F +W PF T
Sbjct: 40 INEWFSSQTGGFVKDILSNSIDDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLT 99
Query: 273 IKKDFHVDSTTVVKKPTM-HLLQSLFYTENKELGARLVELPYK-------ESDFRMVVIL 428
+ DFHV V+ P M Q F G ++ + Y+ + F M + L
Sbjct: 100 EEGDFHVSPDHDVRVPFMAGSHQHAFMDVGCHPGFNVLRMMYRTGGAAGGDKMFAMYIYL 159
Query: 429 PDKLEGLSSVLEKAA 473
PD +GL + K A
Sbjct: 160 PDDRDGLPELARKLA 174
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 102 DTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETIKK 281
+ KK+ IN+W ++ T I + D ++ L N I+F+G W PF T
Sbjct: 82 EPKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTG 141
Query: 282 DFH-VDSTTV 308
FH +D ++V
Sbjct: 142 KFHRLDGSSV 151
>06_01_1101 -
9044679-9045320,9045484-9045890,9046020-9046274,
9046375-9046498,9047237-9047289,9047388-9047648,
9047795-9047848,9047975-9048458,9048554-9048592
Length = 772
Score = 30.7 bits (66), Expect = 0.77
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -3
Query: 290 MEIFLYSLTCVERH----VPVTLEEYNIEERGSCIWIYGVIRDWRFNMSSGLLISPLIND 123
+E+ ++ + V+ H VPVTL I C+W YG + + F++ + + IS L+N
Sbjct: 463 IEVIYFAASLVKFHEGAWVPVTLSF--IFMMVMCVWHYGTKKKYEFDVQNKVSISWLLN- 519
Query: 122 VSCFFGIAEVNSFNL 78
+ GI V L
Sbjct: 520 IGPSLGIVRVRGIGL 534
>02_05_0622 +
30437533-30437577,30437694-30438177,30438301-30438354,
30438565-30438789,30438891-30438943,30439591-30439714,
30439823-30440077,30440171-30440517,30440661-30441266,
30441504-30441546,30441624-30441757
Length = 789
Score = 30.7 bits (66), Expect = 0.77
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -3
Query: 290 MEIFLYSLTCVERH----VPVTLEEYNIEERGSCIWIYGVIRDWRFNMSSGLLISPLIND 123
+E+ +S + V+ H VP+TL I C+W YG I+ + F+ + + ++ L+N
Sbjct: 453 IEVLYFSASLVKFHEGAWVPITLSF--IFMIVMCVWHYGTIKKYEFDFQNKVSVNWLLN- 509
Query: 122 VSCFFGIAEVNSFNL 78
+ GI V L
Sbjct: 510 LGPSLGIVRVRGIGL 524
>11_01_0458 + 3536162-3537794,3537905-3538272
Length = 666
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = -1
Query: 529 FTSLPAGSSLNTSSMSPFSAAFSKTDDKPSSLSGRMTTIRKSDSLYGNSTNRAPSSLFSV 350
FT S N S + + F+K D + SL ++ ++ + LY N P+++FS+
Sbjct: 79 FTGFIPSSLSNLSQLVALTLQFNKLDGQIPSLGNQLQMLQIFNVLYNNLHGVIPNAIFSL 138
>04_04_0527 +
25962541-25962548,25965434-25965502,25965997-25966073,
25966483-25966577
Length = 82
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 423 ILPDKLEGLSSVLEKAAEKGLIDDVFRLEPAG 518
I+ +K G S ++K E+ ++DDV L P+G
Sbjct: 5 IVDEKNHGFSKKVQKLQEQDILDDVVTLPPSG 36
>08_01_0978 +
9841441-9842169,9842303-9842590,9842768-9843612,
9843941-9844223,9844303-9844416
Length = 752
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 48 FTSSSRQYQSEVETIDFSDTKKA-ADIINQWANEKTRGHIKSPISDDTID-PNAA 206
+ ++ E E + S+T++ ADI QWA R +K SD+T+ PN A
Sbjct: 182 YAGKQAEWDKEDEAVAESNTQQVLADIPVQWARNWARARVKKN-SDETLSFPNPA 235
>06_03_0813 -
24853119-24854480,24854711-24855442,24855556-24855962,
24856091-24856359,24856681-24856733,24857019-24857078,
24857309-24857363,24858080-24858155,24858225-24858801
Length = 1196
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -3
Query: 203 CIWIYGVIRDWRFNMSSGLLISPLINDVSCFFGIAEVNSFNL 78
CIW YG I+ + F++ + + I+ L+ +S GI V L
Sbjct: 434 CIWHYGTIKKYEFDLQNKVSINWLLG-LSPNLGIVRVRGIGL 474
>12_02_1244 +
27302715-27302754,27302865-27302936,27303250-27303423,
27303533-27303667,27304407-27304546,27304844-27304933,
27305064-27305186,27305590-27305742,27306032-27306148,
27306818-27306988,27307082-27307161,27307238-27307262
Length = 439
Score = 28.3 bits (60), Expect = 4.1
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +3
Query: 357 NKELGARLVELPYKESDFRMVVILPD-----KLEGLSSVLEKAAEKGLIDDVFRLEPAGR 521
NK LGA L +L S V +L K+EG ++ L +AAEKGL + + + AG
Sbjct: 193 NKALGAPL-DLALTSSSVSCVKLLVQAGAEVKVEGPNNHLVRAAEKGLTEAIKCMLEAGA 251
Query: 522 DVNL 533
+ N+
Sbjct: 252 NPNV 255
>10_08_0960 -
21853010-21853282,21854078-21854449,21854555-21854862,
21854946-21855102
Length = 369
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 138 ANEKTRGHIKSPISDDTIDPNAAAA 212
A + RG KSP DD I+PNAAAA
Sbjct: 241 AAAQARGS-KSPEDDDNINPNAAAA 264
>03_03_0206 +
15447054-15447181,15448243-15448298,15448373-15448515,
15448630-15448827,15448901-15449100,15449585-15449684,
15449769-15450350,15450434-15450556,15451028-15451108,
15451188-15451495,15451577-15451816,15452261-15452345,
15452429-15452606,15453053-15453227,15453826-15453982
Length = 917
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -3
Query: 329 MHSWLLHYRCRVHMEIFLYSLTCVERHVPVTLEEYNIEERGSC 201
MH + YRC ++ F + VER ++L+++ + G C
Sbjct: 66 MHLYRRWYRCFTNLSSFSFDNGHVERKDDLSLDQFRAQYDGKC 108
>04_04_1055 + 30444235-30446649
Length = 804
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +1
Query: 85 KLLTSAIPKKQLTSLISGLM------RRPEDILNLQSLMTP*IQMQLPRSSMLYSSRVTG 246
+LL A+P+ T L + L+ PE+ L L +L+ + + YS+ +T
Sbjct: 55 RLLLEALPRPPPTLLCNALLIAYAARALPEEALRLYALLNHAARPPVRSDHYTYSAALTA 114
Query: 247 TCLSTQVRL*RKISMWTLQR 306
S ++RL R + L+R
Sbjct: 115 CARSRRLRLGRSVHAHMLRR 134
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 523 SLPAGSSLNTSSMSPFSAAFSKTDDKPSSLSGRMTTIR 410
S G + +T S SP S + SKT PS+ +TI+
Sbjct: 582 STATGKTSSTPSTSPLSTSTSKTSSTPSTSPLSSSTIK 619
>08_01_1069 +
10916376-10916448,10917331-10918031,10918222-10918443,
10918526-10919351,10919437-10919574,10920431-10920569,
10920655-10920781,10921895-10921936,10922089-10922160,
10922491-10922589,10922694-10922735,10922947-10923027,
10923129-10923179,10923265-10923346,10923741-10923835,
10924739-10924810,10924907-10925023,10925176-10925244,
10925507-10925573,10925709-10925950
Length = 1118
Score = 27.1 bits (57), Expect = 9.5
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Frame = +3
Query: 183 DTIDP--NAAAALFNVIFFQGHWHVPFNASETIKKDFHVDSTTVVKKPTMHLLQSLFYTE 356
D +DP +AAA LF + + + KKDFH+ S + KK + ++ L
Sbjct: 374 DWLDPTADAAALLFQQLTSSENIQLRKGLLSPNKKDFHLSSISPTKKQSDNVEDKL---S 430
Query: 357 NKELGARLVELPYKESDFRMVV-----ILPDKLEGLSSVLEK 467
N EL V + +D + ++ +PD+ G S + EK
Sbjct: 431 NAELSTIYVH-KQENNDVQGLIPQKQATIPDEKSGSSVIHEK 471
>07_03_0631 +
20104332-20106802,20106904-20107030,20107352-20107479,
20108771-20109083
Length = 1012
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 286 KSFFIVSLALKGTCQ*PWKNITLKSAAAAFGSMV 185
K FF+V K Q WK + K AA GS+V
Sbjct: 257 KRFFLVLDNAKDNLQREWKTVRAKLTGAAAGSIV 290
>03_02_0969 -
12795413-12795475,12795672-12795744,12796011-12796114,
12796374-12796493,12796591-12796683,12797813-12797911,
12798074-12798167,12798254-12798333,12798817-12799347
Length = 418
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 281 FLYSLTCVERHVPVTLEEYNIEE 213
+L SL CV+ HVP L Y EE
Sbjct: 324 YLDSLGCVDHHVPRVLARYIAEE 346
>02_02_0661 -
12731005-12731238,12732756-12732884,12732969-12733193,
12733302-12733478,12733576-12733788
Length = 325
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 252 PFNASETIKKDFHVDSTTVVKKPTMHLL 335
PFN ++TI++ + + S + KPT+ +L
Sbjct: 105 PFNGAKTIRELYEIASPNYIGKPTVPVL 132
>01_06_0605 +
30548588-30548732,30549004-30549094,30549470-30549536,
30550664-30550778,30550939-30551042
Length = 173
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 275 YSLTCVERHVPVTLEEYNIEERGSC 201
Y+ V+ HVP+TLE GSC
Sbjct: 28 YATVAVKSHVPITLENTLNASEGSC 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,289,760
Number of Sequences: 37544
Number of extensions: 287583
Number of successful extensions: 842
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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