Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_L18
(500 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL513304-1|CAH73405.1| 739|Homo sapiens adenosine deaminase, RN... 32 1.3
AL392083-3|CAH72171.1| 739|Homo sapiens adenosine deaminase, RN... 32 1.3
AF034837-1|AAF78094.1| 739|Homo sapiens double-stranded RNA spe... 32 1.3
Z95976-1|CAB09392.1| 699|Homo sapiens RNA editing deaminase 1 p... 31 1.7
X99383-1|CAA67762.1| 701|Homo sapiens double-stranded RNA-speci... 31 1.7
X99227-1|CAA67611.1| 741|Homo sapiens double-stranded RNA-speci... 31 1.7
U82121-1|AAB61687.1| 741|Homo sapiens double stranded RNA-speci... 31 1.7
U82120-1|AAB61686.1| 701|Homo sapiens double stranded RNA-speci... 31 1.7
U76422-1|AAC51242.1| 714|Homo sapiens dsRNA adenosine deaminase... 31 1.7
U76421-1|AAC51241.1| 741|Homo sapiens dsRNA adenosine deaminase... 31 1.7
U76420-1|AAC51240.1| 701|Homo sapiens dsRNA adenosine deaminase... 31 1.7
BC065545-1|AAH65545.1| 701|Homo sapiens adenosine deaminase, RN... 31 1.7
AY135659-1|AAN10291.1| 729|Homo sapiens adenosine deaminase pro... 31 1.7
AL163301-2|CAB90493.1| 741|Homo sapiens human dsRNA adenosine d... 31 1.7
AF533142-1|AAM97654.1| 701|Homo sapiens adenosine deaminase ADA... 31 1.7
AF525422-1|AAM83100.1| 729|Homo sapiens adenosine deaminase ADA... 31 1.7
AF001042-1|AAB58300.1| 741|Homo sapiens RNA editase protein. 31 1.7
AB194373-1|BAE16329.1| 674|Homo sapiens adenosine deaminase act... 31 1.7
AB194372-1|BAE16328.1| 701|Homo sapiens adenosine deaminase act... 31 1.7
AB194371-1|BAE16327.1| 701|Homo sapiens adenosine deaminase act... 31 1.7
AB194370-1|BAE16326.1| 701|Homo sapiens adenosine deaminase act... 31 1.7
BC095397-1|AAH95397.1| 496|Homo sapiens staufen, RNA binding pr... 31 2.3
BC050432-1|AAH50432.1| 577|Homo sapiens staufen, RNA binding pr... 31 2.3
BC010169-1|AAH10169.1| 196|Homo sapiens STAU1 protein protein. 31 2.3
AY546099-1|AAS76637.1| 502|Homo sapiens staufen protein T4 vari... 31 2.3
AY529074-1|AAS76636.1| 502|Homo sapiens staufen protein T5 vari... 31 2.3
AL133174-8|CAC14085.1| 577|Homo sapiens staufen, RNA binding pr... 31 2.3
AL133174-7|CAI42822.1| 129|Homo sapiens staufen, RNA binding pr... 31 2.3
AL133174-6|CAI42821.1| 199|Homo sapiens staufen, RNA binding pr... 31 2.3
AL133174-5|CAI42819.1| 494|Homo sapiens staufen, RNA binding pr... 31 2.3
AL133174-4|CAI42820.1| 502|Homo sapiens staufen, RNA binding pr... 31 2.3
AL133174-3|CAC14084.1| 496|Homo sapiens staufen, RNA binding pr... 31 2.3
AJ132258-1|CAB40082.1| 496|Homo sapiens staufen protein protein. 31 2.3
AF061941-1|AAD17533.1| 496|Homo sapiens staufen protein protein. 31 2.3
AF061940-1|AAD17532.1| 496|Homo sapiens staufen protein protein. 31 2.3
AF061939-1|AAD17531.1| 577|Homo sapiens staufen protein protein. 31 2.3
AF061938-1|AAD17530.1| 496|Homo sapiens staufen protein protein. 31 2.3
AB209561-1|BAD92798.1| 591|Homo sapiens staufen isoform b varia... 31 2.3
U73197-1|AAB18134.1| 711|Homo sapiens RNA adenosine deaminase p... 30 3.9
>AL513304-1|CAH73405.1| 739|Homo sapiens adenosine deaminase,
RNA-specific, B2 (RED2 homolog rat) protein.
Length = 739
Score = 31.9 bits (69), Expect = 1.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV V + ++G+ + G G K A+ AAE ALR V
Sbjct: 150 PVHAPVFAVAVEVNGLTFEGTGPTKKKAKMRAAELALRSFV 190
>AL392083-3|CAH72171.1| 739|Homo sapiens adenosine deaminase,
RNA-specific, B2 (RED2 homolog rat) protein.
Length = 739
Score = 31.9 bits (69), Expect = 1.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV V + ++G+ + G G K A+ AAE ALR V
Sbjct: 150 PVHAPVFAVAVEVNGLTFEGTGPTKKKAKMRAAELALRSFV 190
>AF034837-1|AAF78094.1| 739|Homo sapiens double-stranded RNA
specific adenosine deaminase protein.
Length = 739
Score = 31.9 bits (69), Expect = 1.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV V + ++G+ + G G K A+ AAE ALR V
Sbjct: 150 PVHAPVFAVAVEVNGLTFEGTGPTKKKAKMRAAELALRSFV 190
>Z95976-1|CAB09392.1| 699|Homo sapiens RNA editing deaminase 1
protein.
Length = 699
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>X99383-1|CAA67762.1| 701|Homo sapiens double-stranded RNA-specific
editase protein.
Length = 701
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>X99227-1|CAA67611.1| 741|Homo sapiens double-stranded RNA-specific
editase protein.
Length = 741
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>U82121-1|AAB61687.1| 741|Homo sapiens double stranded RNA-specific
editase 1 hRED1-L protein.
Length = 741
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>U82120-1|AAB61686.1| 701|Homo sapiens double stranded RNA-specific
editase 1 hRED1-S protein.
Length = 701
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>U76422-1|AAC51242.1| 714|Homo sapiens dsRNA adenosine deaminase
DRADA2c protein.
Length = 714
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>U76421-1|AAC51241.1| 741|Homo sapiens dsRNA adenosine deaminase
DRADA2b protein.
Length = 741
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>U76420-1|AAC51240.1| 701|Homo sapiens dsRNA adenosine deaminase
DRADA2a protein.
Length = 701
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>BC065545-1|AAH65545.1| 701|Homo sapiens adenosine deaminase,
RNA-specific, B1 (RED1 homolog rat) protein.
Length = 701
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>AY135659-1|AAN10291.1| 729|Homo sapiens adenosine deaminase
protein.
Length = 729
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 131 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 171
>AL163301-2|CAB90493.1| 741|Homo sapiens human dsRNA adenosine
deaminase DRADA2b, EC 3.5. protein.
Length = 741
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>AF533142-1|AAM97654.1| 701|Homo sapiens adenosine deaminase ADAR2
variant protein.
Length = 701
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>AF525422-1|AAM83100.1| 729|Homo sapiens adenosine deaminase ADAR2
protein.
Length = 729
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 131 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 171
>AF001042-1|AAB58300.1| 741|Homo sapiens RNA editase protein.
Length = 741
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>AB194373-1|BAE16329.1| 674|Homo sapiens adenosine deaminase acting
on RNA type2d protein.
Length = 674
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>AB194372-1|BAE16328.1| 701|Homo sapiens adenosine deaminase acting
on RNA type2a protein.
Length = 701
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>AB194371-1|BAE16327.1| 701|Homo sapiens adenosine deaminase acting
on RNA type2a protein.
Length = 701
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>AB194370-1|BAE16326.1| 701|Homo sapiens adenosine deaminase acting
on RNA type2a protein.
Length = 701
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFV 143
>BC095397-1|AAH95397.1| 496|Homo sapiens staufen, RNA binding
protein, homolog 1 (Drosophila) protein.
Length = 496
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 40 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 79
>BC050432-1|AAH50432.1| 577|Homo sapiens staufen, RNA binding
protein, homolog 1 (Drosophila) protein.
Length = 577
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 121 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 160
>BC010169-1|AAH10169.1| 196|Homo sapiens STAU1 protein protein.
Length = 196
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 40 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 79
>AY546099-1|AAS76637.1| 502|Homo sapiens staufen protein T4 variant
protein.
Length = 502
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 40 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 79
>AY529074-1|AAS76636.1| 502|Homo sapiens staufen protein T5 variant
protein.
Length = 502
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 40 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 79
>AL133174-8|CAC14085.1| 577|Homo sapiens staufen, RNA binding
protein, homolog 1 (Drosophila) protein.
Length = 577
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 121 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 160
>AL133174-7|CAI42822.1| 129|Homo sapiens staufen, RNA binding
protein, homolog 1 (Drosophila) protein.
Length = 129
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 80 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 119
>AL133174-6|CAI42821.1| 199|Homo sapiens staufen, RNA binding
protein, homolog 1 (Drosophila) protein.
Length = 199
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 40 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 79
>AL133174-5|CAI42819.1| 494|Homo sapiens staufen, RNA binding
protein, homolog 1 (Drosophila) protein.
Length = 494
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 40 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 79
>AL133174-4|CAI42820.1| 502|Homo sapiens staufen, RNA binding
protein, homolog 1 (Drosophila) protein.
Length = 502
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 40 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 79
>AL133174-3|CAC14084.1| 496|Homo sapiens staufen, RNA binding
protein, homolog 1 (Drosophila) protein.
Length = 496
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 40 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 79
>AJ132258-1|CAB40082.1| 496|Homo sapiens staufen protein protein.
Length = 496
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 40 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 79
>AF061941-1|AAD17533.1| 496|Homo sapiens staufen protein protein.
Length = 496
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 40 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 79
>AF061940-1|AAD17532.1| 496|Homo sapiens staufen protein protein.
Length = 496
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 40 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 79
>AF061939-1|AAD17531.1| 577|Homo sapiens staufen protein protein.
Length = 577
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 121 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 160
>AF061938-1|AAD17530.1| 496|Homo sapiens staufen protein protein.
Length = 496
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 40 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 79
>AB209561-1|BAD92798.1| 591|Homo sapiens staufen isoform b variant
protein.
Length = 591
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDL 170
PV VEL++ G +NG G + +A++ AA +ALR L
Sbjct: 135 PVPPLLYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRIL 174
>U73197-1|AAB18134.1| 711|Homo sapiens RNA adenosine deaminase
protein.
Length = 711
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 51 PVRQAALCVELTIDGVVYNGFGDNKVSARNSAAEQALRDLV 173
PV + + ++G V+ G G K A+ AAE+ALR V
Sbjct: 103 PVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRYFV 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,638,434
Number of Sequences: 237096
Number of extensions: 635388
Number of successful extensions: 1434
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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