Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_L15
         (581 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005029-1|AAH05029.1|  527|Homo sapiens LEPREL1 protein protein.      32   1.7  
AK001580-1|BAA91769.1|  527|Homo sapiens protein ( Homo sapiens ...    32   1.7  
AJ430351-1|CAD23039.2|  708|Homo sapiens leprecan-like 1 protein...    32   1.7  

>BC005029-1|AAH05029.1|  527|Homo sapiens LEPREL1 protein protein.
          Length = 527

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 341 ARRIVRCAFLYNTPFYFNIKPIVCRKCY-GHQSSSND 234
           ARRIV   F+ N+  YF+   +VCR    G Q   ND
Sbjct: 357 ARRIVESYFMLNSTLYFSYTHMVCRTALSGQQDRRND 393


>AK001580-1|BAA91769.1|  527|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10718 fis, clone NT2RP3001096, weakly similar to
           Rattus norvegicus leprecan mRNA. ).
          Length = 527

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 341 ARRIVRCAFLYNTPFYFNIKPIVCRKCY-GHQSSSND 234
           ARRIV   F+ N+  YF+   +VCR    G Q   ND
Sbjct: 357 ARRIVESYFMLNSTLYFSYTHMVCRTALSGQQDRRND 393


>AJ430351-1|CAD23039.2|  708|Homo sapiens leprecan-like 1 protein
           protein.
          Length = 708

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 341 ARRIVRCAFLYNTPFYFNIKPIVCRKCY-GHQSSSND 234
           ARRIV   F+ N+  YF+   +VCR    G Q   ND
Sbjct: 538 ARRIVESYFMLNSTLYFSYTHMVCRTALSGQQDRRND 574


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,352,923
Number of Sequences: 237096
Number of extensions: 1414899
Number of successful extensions: 3084
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3084
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)