Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_L08
(605 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 25 0.58
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 25 0.58
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 25 0.58
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 25 0.58
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 24 1.3
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 1.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 1.8
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 1.8
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 1.8
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 1.8
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 1.8
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 1.8
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 1.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 2.3
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 3.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 3.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.1
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 5.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 7.1
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.1
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 9.4
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 9.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 9.4
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.58
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 129 TSSNQHRYQFKSNEQQNKAVSSSNSNTNTYAGYNSGLNADVNN 257
TS + R + + + + SS SN Y+ YN+ N + NN
Sbjct: 62 TSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNN 104
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.58
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 129 TSSNQHRYQFKSNEQQNKAVSSSNSNTNTYAGYNSGLNADVNN 257
TS + R + + + + SS SN Y+ YN+ N + NN
Sbjct: 62 TSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNN 104
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.58
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 129 TSSNQHRYQFKSNEQQNKAVSSSNSNTNTYAGYNSGLNADVNN 257
TS + R + + + + SS SN Y+ YN+ N + NN
Sbjct: 62 TSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNN 104
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.58
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 129 TSSNQHRYQFKSNEQQNKAVSSSNSNTNTYAGYNSGLNADVNN 257
TS + R + + + + SS SN Y+ YN+ N + NN
Sbjct: 62 TSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNN 104
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 590 RLLASFFSIIINSLLMLVRIVRPWFS 513
+L+ FF I+ ++ LV I+ W+S
Sbjct: 262 KLIVDFFMILNEIIMKLVGIIIMWYS 287
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.8
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +3
Query: 525 SYNSNQHQQRIYYN 566
+YN+N + +++YYN
Sbjct: 102 NYNNNNYNKKLYYN 115
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.8
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +3
Query: 525 SYNSNQHQQRIYYN 566
+YN+N + +++YYN
Sbjct: 102 NYNNNNYNKKLYYN 115
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.8
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +3
Query: 525 SYNSNQHQQRIYYN 566
+YN+N + +++YYN
Sbjct: 98 NYNNNNYNKKLYYN 111
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.8
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +3
Query: 525 SYNSNQHQQRIYYN 566
+YN+N + +++YYN
Sbjct: 98 NYNNNNYNKKLYYN 111
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.8
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +3
Query: 525 SYNSNQHQQRIYYN 566
+YN+N + +++YYN
Sbjct: 98 NYNNNNYNKKLYYN 111
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.8
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +3
Query: 525 SYNSNQHQQRIYYN 566
+YN+N + +++YYN
Sbjct: 98 NYNNNNYNKKLYYN 111
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.4 bits (48), Expect = 1.8
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = +3
Query: 522 RSYNSNQHQQRIYYN 566
++YN+N + +++YYN
Sbjct: 312 KNYNNNYNSKKLYYN 326
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 1.8
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = +3
Query: 522 RSYNSNQHQQRIYYN 566
++YN+N + +++YYN
Sbjct: 323 KNYNNNYNSKKLYYN 337
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 2.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 114 TNAHSTSSNQHRYQFKSNEQQNKAVSSSNSNTN 212
+N STSSN + Q+K N+ N S + T+
Sbjct: 101 SNRSSTSSNDPKNQYK-NQNNNHYTSHQHLRTH 132
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 177 NKAVSSSNSNTNTYAGYNSGLNADVNN 257
N +++ N+NTN N+ N + NN
Sbjct: 225 NSTITAGNANTNASNNNNNNNNNNNNN 251
Score = 22.6 bits (46), Expect = 3.1
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 75 QNSHLSNAYSG-FNTNAHSTSSNQHRYQFKSNEQQNKAVSSSNSNTN 212
+NS+ S +G NTNA + ++N + +N + + SN N
Sbjct: 221 RNSNNSTITAGNANTNASNNNNNNNNNNNNNNGANDNGNGNGASNNN 267
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 198 NSNTNTYAGYNSGLNADVNNQIEYTDN 278
NSN +T N+ NA NN +N
Sbjct: 222 NSNNSTITAGNANTNASNNNNNNNNNN 248
Score = 21.8 bits (44), Expect = 5.4
Identities = 16/81 (19%), Positives = 30/81 (37%)
Frame = +3
Query: 15 YEDSQAHLSGQQYDSTAIDSQNSHLSNAYSGFNTNAHSTSSNQHRYQFKSNEQQNKAVSS 194
+E + H+ Q D ++ + N+N + ++ +N N +
Sbjct: 190 WEHKETHIDWQPEDEECTEATAGAVVLETCQRNSNNSTITAGNANTNASNNNNNN----N 245
Query: 195 SNSNTNTYAGYNSGLNADVNN 257
+N+N N A N N NN
Sbjct: 246 NNNNNNNGANDNGNGNGASNN 266
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 3.1
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +3
Query: 126 STSSNQHRYQFKSNEQQNKAVSSSNSNT--NTYAGYNSGLNADVNNQIEYTDN 278
S +Q R + + ++ K +SS ++N + Y YN+ N + NN Y +N
Sbjct: 63 SKERSQDRTE-RETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYNN--NYNNN 112
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 3.1
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +3
Query: 126 STSSNQHRYQFKSNEQQNKAVSSSNSNT--NTYAGYNSGLNADVNNQIEYTDN 278
S +Q R + + ++ K +SS ++N + Y YN+ N + NN Y +N
Sbjct: 63 SKERSQDRTE-RETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYNN--NYNNN 112
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 162 SNEQQNKAVSSSNSNTNTYAGYNSGLN 242
SN + ++ N+N N Y YN+ N
Sbjct: 319 SNNYKYSNYNNYNNNYNNYNNYNNNYN 345
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/42 (23%), Positives = 17/42 (40%)
Frame = +3
Query: 117 NAHSTSSNQHRYQFKSNEQQNKAVSSSNSNTNTYAGYNSGLN 242
N H ++NQ+ +N Q + ++ N N N N
Sbjct: 411 NTHCVNNNQNDNIQNTNNQNDNNQKNNKKNANNQKNNNQNDN 452
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 105 GFNTNAHSTSSNQHRYQFKS 164
GFN TSS+ Y F S
Sbjct: 1041 GFNVGYRETSSSNPSYNFSS 1060
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 105 GFNTNAHSTSSNQHRYQFKS 164
GFN TSS+ Y F S
Sbjct: 1037 GFNVGYRETSSSNPSYNFSS 1056
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 162 SNEQQNKAVSSSNSNTNTYAGYNSGLNADVN 254
S+ N S+ N+ N Y YN L ++N
Sbjct: 83 SSLSNNYNYSNYNNYNNNYNNYNKKLYYNIN 113
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 168 EQQNKAVSSSNSNTNTYAGYNSGLNADVNN 257
+QQN+ +S+SN N +G N N+ +
Sbjct: 525 KQQNQVPLTSSSNVNNNSG-NGNTNSSARD 553
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3
Query: 177 NKAVSSSNSNTNTYAGYNSGLNAD 248
N ++S++ + N Y YN+ N +
Sbjct: 85 NNSLSNNYNYNNNYNNYNNNYNTN 108
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 9.4
Identities = 5/13 (38%), Positives = 11/13 (84%)
Frame = +3
Query: 525 SYNSNQHQQRIYY 563
+YN+N + +++YY
Sbjct: 105 NYNNNNYNKKLYY 117
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 18 EDSQAHLSGQQYDSTAIDSQNSHLSNAYSG 107
EDS+ HL+ +++ S A ++ S+ G
Sbjct: 398 EDSEEHLTPKRFHSRAASKEDLSPSSLADG 427
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 18 EDSQAHLSGQQYDSTAIDSQNSHLSNAYSG 107
EDS+ HL+ +++ S A ++ S+ G
Sbjct: 398 EDSEEHLTPKRFHSRAASKEDLSPSSLADG 427
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 141 QHRYQFKSNEQQNKAVSSSNSNTNTYAGYNSGLN 242
Q + Q + +QQ + + S GYNSG N
Sbjct: 1536 QQQQQQQPQQQQKEYGAVSGLVVQLQRGYNSGNN 1569
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,370
Number of Sequences: 438
Number of extensions: 3692
Number of successful extensions: 39
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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