Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_L07
         (188 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   1.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   1.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   1.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    19   4.1  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          19   5.4  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    18   9.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               18   9.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              18   9.5  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    18   9.5  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 177 NHNERSIKTNKRKP 136
           NHNERS   +  KP
Sbjct: 259 NHNERSTPRSHAKP 272


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 177 NHNERSIKTNKRKP 136
           NHNERS   +  KP
Sbjct: 259 NHNERSTPRSHAKP 272


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 177 NHNERSIKTNKRKP 136
           NHNERS   +  KP
Sbjct: 259 NHNERSTPRSHAKP 272


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 67  LSRSNRINKVN*M 29
           + R NR+N+VN M
Sbjct: 372 MHRMNRVNRVNRM 384



 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 76  STSLSRSNRINKVN 35
           S  ++R +R+N+VN
Sbjct: 366 SNKMNRMHRMNRVN 379


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = -1

Query: 152 QTNENRVPVQAGSLGNKLSLRNN 84
           Q N N   + AG+     S  NN
Sbjct: 220 QRNSNNSTITAGNANTNASNNNN 242


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 67  LSRSNRINKVN 35
           LSRS RIN  N
Sbjct: 447 LSRSERINYYN 457


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 117 SSLNGDPVFVCLFLWN 164
           SS  G  V  CL  WN
Sbjct: 419 SSFVGPKVKDCLISWN 434


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 102  TVTTQ**VYRPPFQDQI 52
            TVT Q  V+ PP   QI
Sbjct: 1356 TVTHQLIVHAPPHSPQI 1372



 Score = 18.2 bits (35), Expect = 9.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 167  SVP*KQTNENRVPVQAGSLG 108
            S+P +    +RVP Q G  G
Sbjct: 1779 SMPRQNGRYSRVPSQGGGSG 1798


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 119 GSLGNKLSLRNNRFIDLPFKIKSNK 45
           GS G +   R++RF  LP    SNK
Sbjct: 61  GSKGPRDFPRSHRFKSLPRCQLSNK 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,800
Number of Sequences: 438
Number of extensions: 914
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 42
effective length of database: 127,947
effective search space used:  2558940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)