Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_L06
(335 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071571-1|AAL49193.1| 353|Drosophila melanogaster RE63289p pro... 33 0.070
AL133504-3|CAB65845.1| 423|Drosophila melanogaster EG:BACH7M4.4... 33 0.070
AE014298-396|AAF45779.1| 353|Drosophila melanogaster CG12496-PA... 33 0.070
AY061420-1|AAL28968.1| 1107|Drosophila melanogaster LD35137p pro... 28 2.6
AY060445-1|AAL25484.1| 1107|Drosophila melanogaster LD48089p pro... 28 2.6
AF022364-1|AAC47804.1| 1096|Drosophila melanogaster B4 protein. 28 2.6
AE014134-2363|AAF53312.1| 1107|Drosophila melanogaster CG9239-PB... 28 2.6
AE014134-2362|AAF53317.2| 1107|Drosophila melanogaster CG9239-PA... 28 2.6
AY484405-1|AAR86939.1| 857|Drosophila melanogaster reverse tran... 28 3.5
AY484404-1|AAR86938.1| 857|Drosophila melanogaster reverse tran... 28 3.5
BT011344-1|AAR96136.1| 1447|Drosophila melanogaster RH51925p pro... 27 6.0
AE013599-2212|AAF58047.1| 1448|Drosophila melanogaster CG8443-PA... 27 6.0
U11691-1|AAA19905.1| 796|Drosophila melanogaster E239.9-1 protein. 27 8.0
AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein. 27 8.0
>AY071571-1|AAL49193.1| 353|Drosophila melanogaster RE63289p
protein.
Length = 353
Score = 33.5 bits (73), Expect = 0.070
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 149 QGRKMEVQHRRPRAAHIQNQENVYVTKGKSDLAVPVKRPRIS 274
Q R+++ + RR R A I N+ENV T G + VP+ R R S
Sbjct: 25 QRRRLQRRQRRQRRATIANKENVPDTVGYTSTPVPITRLRNS 66
>AL133504-3|CAB65845.1| 423|Drosophila melanogaster EG:BACH7M4.4
protein.
Length = 423
Score = 33.5 bits (73), Expect = 0.070
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 149 QGRKMEVQHRRPRAAHIQNQENVYVTKGKSDLAVPVKRPRIS 274
Q R+++ + RR R A I N+ENV T G + VP+ R R S
Sbjct: 25 QRRRLQRRQRRQRRATIANKENVPDTVGYTSTPVPITRLRNS 66
>AE014298-396|AAF45779.1| 353|Drosophila melanogaster CG12496-PA
protein.
Length = 353
Score = 33.5 bits (73), Expect = 0.070
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 149 QGRKMEVQHRRPRAAHIQNQENVYVTKGKSDLAVPVKRPRIS 274
Q R+++ + RR R A I N+ENV T G + VP+ R R S
Sbjct: 25 QRRRLQRRQRRQRRATIANKENVPDTVGYTSTPVPITRLRNS 66
>AY061420-1|AAL28968.1| 1107|Drosophila melanogaster LD35137p
protein.
Length = 1107
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 48 ESVNLLKTLHCPNKYRLSKSIILVRYEKGSYLLFKAGKWKFNIEGLE 188
E + +LK LH P R KS + +EK ++F + K ++E LE
Sbjct: 671 EGLRILKPLHFPKILRREKSSMAAAHEKEDSIIFLS---KSDLENLE 714
>AY060445-1|AAL25484.1| 1107|Drosophila melanogaster LD48089p
protein.
Length = 1107
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 48 ESVNLLKTLHCPNKYRLSKSIILVRYEKGSYLLFKAGKWKFNIEGLE 188
E + +LK LH P R KS + +EK ++F + K ++E LE
Sbjct: 671 EGLRILKPLHFPKILRREKSSMAAAHEKEDSIIFLS---KSDLENLE 714
>AF022364-1|AAC47804.1| 1096|Drosophila melanogaster B4 protein.
Length = 1096
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 48 ESVNLLKTLHCPNKYRLSKSIILVRYEKGSYLLFKAGKWKFNIEGLE 188
E + +LK LH P R KS + +EK ++F + K ++E LE
Sbjct: 660 EGLRILKPLHFPKILRREKSSMAAAHEKEDSIIFLS---KSDLENLE 703
>AE014134-2363|AAF53312.1| 1107|Drosophila melanogaster CG9239-PB,
isoform B protein.
Length = 1107
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 48 ESVNLLKTLHCPNKYRLSKSIILVRYEKGSYLLFKAGKWKFNIEGLE 188
E + +LK LH P R KS + +EK ++F + K ++E LE
Sbjct: 671 EGLRILKPLHFPKILRREKSSMAAAHEKEDSIIFLS---KSDLENLE 714
>AE014134-2362|AAF53317.2| 1107|Drosophila melanogaster CG9239-PA,
isoform A protein.
Length = 1107
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 48 ESVNLLKTLHCPNKYRLSKSIILVRYEKGSYLLFKAGKWKFNIEGLE 188
E + +LK LH P R KS + +EK ++F + K ++E LE
Sbjct: 671 EGLRILKPLHFPKILRREKSSMAAAHEKEDSIIFLS---KSDLENLE 714
>AY484405-1|AAR86939.1| 857|Drosophila melanogaster reverse
transcriptase protein.
Length = 857
Score = 27.9 bits (59), Expect = 3.5
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 141 LLFKAGKWKFNIEGLERHI-SRIKKTYMLQKENQILPFLSSDQGLAVRVGLRRSKYK 308
LL K K K N +R I +++T L KEN + LSSD+G V + +YK
Sbjct: 251 LLVKEHKTKNNQNSRDRAILDTVEQTRKLLKENINIKILSSDKGNKT-VAMDEDEYK 306
>AY484404-1|AAR86938.1| 857|Drosophila melanogaster reverse
transcriptase protein.
Length = 857
Score = 27.9 bits (59), Expect = 3.5
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 141 LLFKAGKWKFNIEGLERHI-SRIKKTYMLQKENQILPFLSSDQGLAVRVGLRRSKYK 308
LL K K K N +R I +++T L KEN + LSSD+G V + +YK
Sbjct: 251 LLVKEHKTKNNQNSRDRAILDTVEQTRKLLKENINIKILSSDKGNKT-VAMDEDEYK 306
>BT011344-1|AAR96136.1| 1447|Drosophila melanogaster RH51925p
protein.
Length = 1447
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 143 IVQGRKMEVQHRRPRAAHIQNQENVYVTKGKSDLAVPVKRPRISGPRGP*AI 298
I QG ++ + RP + E YVT G SD + P + +GP A+
Sbjct: 255 ITQGDLLDKKRTRPDSVDCTPPE--YVTPGVSDPPILPLHPNVKNAKGPQAL 304
>AE013599-2212|AAF58047.1| 1448|Drosophila melanogaster CG8443-PA
protein.
Length = 1448
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 143 IVQGRKMEVQHRRPRAAHIQNQENVYVTKGKSDLAVPVKRPRISGPRGP*AI 298
I QG ++ + RP + E YVT G SD + P + +GP A+
Sbjct: 255 ITQGDLLDKKRTRPDSVDCTPPE--YVTPGVSDPPILPLHPNVKNAKGPQAL 304
>U11691-1|AAA19905.1| 796|Drosophila melanogaster E239.9-1 protein.
Length = 796
Score = 26.6 bits (56), Expect = 8.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 165 KFNIEGLERHISRIKKTYMLQKENQILPFL 254
KFN E L + S +KKT +Q + ++ FL
Sbjct: 290 KFNKESLNLYESHVKKTKEIQALSDVMDFL 319
>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
Length = 2360
Score = 26.6 bits (56), Expect = 8.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 165 KFNIEGLERHISRIKKTYMLQKENQILPFL 254
KFN E L + S +KKT +Q + ++ FL
Sbjct: 369 KFNKESLNLYESHVKKTKEIQALSDVMDFL 398
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,698,605
Number of Sequences: 53049
Number of extensions: 249197
Number of successful extensions: 447
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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