Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_L04
         (569 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF588653-1|ABQ96839.1|  176|Anopheles gambiae transposase protein.     25   1.3  
EF588460-1|ABQ96696.1|  177|Anopheles gambiae transposase protein.     25   1.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   5.3  
Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease prot...    23   9.3  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       23   9.3  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   9.3  

>EF588653-1|ABQ96839.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 15/63 (23%), Positives = 25/63 (39%)
 Frame = +1

Query: 190 IDSPGSPTAPEIPPEEYSLNENEERAIIEPRSLEDPRVKELIQVLIDWINDELAPHRIIV 369
           ID    P+A    P     N N        + + +   K L ++L+D I  E  P  ++ 
Sbjct: 67  IDDEAGPSAVNFQPSNQYFNSNMSIQGYLKKPINNETKKVLDRMLLDLICKECLPFNLVE 126

Query: 370 KDI 378
            +I
Sbjct: 127 SEI 129


>EF588460-1|ABQ96696.1|  177|Anopheles gambiae transposase protein.
          Length = 177

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 15/63 (23%), Positives = 25/63 (39%)
 Frame = +1

Query: 190 IDSPGSPTAPEIPPEEYSLNENEERAIIEPRSLEDPRVKELIQVLIDWINDELAPHRIIV 369
           ID    P+A    P     N N        + + +   K L ++L+D I  E  P  ++ 
Sbjct: 68  IDDEAGPSAVNFQPSNQYFNSNMSIQGYLKKPINNETKKVLDRMLLDLICKECLPFNLVE 127

Query: 370 KDI 378
            +I
Sbjct: 128 SEI 130


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -1

Query: 341 SLIQSINTCISSFTL 297
           S ++S++ CISSFTL
Sbjct: 199 STLRSLHDCISSFTL 213


>Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 289 EDPRVKELIQVLIDWINDEL 348
           ++P V   +   IDWIND++
Sbjct: 247 KNPGVFVRVSYFIDWINDKI 266


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 25  NKNFEMSSPRPNSPRTP 75
           N+N E   PRP  P+TP
Sbjct: 89  NQN-EQQQPRPQPPKTP 104


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 430 TETKLDVPEVTQSEEGQRQKLSVVLRAVNRVLYGTSK 540
           T++ +  PEV Q  E  ++K S+  ++ N+   GT++
Sbjct: 157 TQSSVCTPEVQQWFEELKEKRSLQEKSTNQGAEGTAR 193


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.310    0.132    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,603
Number of Sequences: 2352
Number of extensions: 11231
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)