Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_L04
(569 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016687-3|AAC48090.1| 375|Caenorhabditis elegans Paralysed arr... 117 7e-27
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 41 7e-04
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 34 0.063
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 34 0.063
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 34 0.063
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 34 0.063
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 34 0.063
U39676-3|AAB37032.2| 941|Caenorhabditis elegans Hypothetical pr... 34 0.083
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 31 0.44
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 31 0.44
AL117202-21|CAB55087.1| 370|Caenorhabditis elegans Hypothetical... 31 0.58
U40800-8|ABB51192.1| 349|Caenorhabditis elegans Hypothetical pr... 29 2.4
U40800-7|AAA81493.2| 343|Caenorhabditis elegans Hypothetical pr... 29 2.4
AC024859-21|AAK29962.4| 490|Caenorhabditis elegans Twik family ... 29 2.4
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 3.1
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 3.1
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 3.1
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 3.1
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 3.1
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 3.1
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 3.1
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 3.1
Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 28 4.1
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 28 4.1
U42436-7|AAO61428.2| 223|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF038621-4|AAK71387.2| 1064|Caenorhabditis elegans Hypothetical ... 28 5.4
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 27 7.2
Z81556-1|CAB04524.1| 965|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF003740-2|AAM15562.2| 330|Caenorhabditis elegans Hypothetical ... 27 9.5
>AF016687-3|AAC48090.1| 375|Caenorhabditis elegans Paralysed arrest
at two-fold protein6 protein.
Length = 375
Score = 117 bits (281), Expect = 7e-27
Identities = 57/137 (41%), Positives = 89/137 (64%)
Frame = +1
Query: 154 EVQDVQAEGKFAIDSPGSPTAPEIPPEEYSLNENEERAIIEPRSLEDPRVKELIQVLIDW 333
EV +++ EG+ A+D P + L E E R + + D ++ +++ +LI W
Sbjct: 53 EVLELELEGREALDQSLVP----VLARNIWLEEGEIRRYLTKETARDQKLAQVVDLLIYW 108
Query: 334 INDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKLDVPEVTQSEEGQRQKLSVVLRAV 513
+N+ELA RI+V+ + EDL+DGQ++QKLLE L + +++VPEV+QSEEGQRQKL +V++
Sbjct: 109 LNEELADQRIVVRHLQEDLFDGQIIQKLLEKLEQIRIEVPEVSQSEEGQRQKLQIVVQTA 168
Query: 514 NRVLYGTSKPVPKWSVD 564
NR+L G + KWS D
Sbjct: 169 NRIL-GQPREQEKWSAD 184
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 40.7 bits (91), Expect = 7e-04
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = +1
Query: 280 RSLEDPRVKELIQVLIDWINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKLDVPEV 459
R+L+D RV + W N L + + D+ ED+ DG +L KLLE+++ KL P
Sbjct: 43 RTLQDERVHIQKKTFTKWCNSFLNRASLEIVDLFEDVGDGIMLMKLLEIISGDKLGKPNR 102
Query: 460 TQSEEGQRQKLSVVL 504
+ + + L+ VL
Sbjct: 103 GRMRVQKVENLNKVL 117
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 40.7 bits (91), Expect = 7e-04
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = +1
Query: 280 RSLEDPRVKELIQVLIDWINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKLDVPEV 459
R+L+D RV + W N L + + D+ ED+ DG +L KLLE+++ KL P
Sbjct: 43 RTLQDERVHIQKKTFTKWCNSFLNRASLEIVDLFEDVGDGIMLMKLLEIISGDKLGKPNR 102
Query: 460 TQSEEGQRQKLSVVL 504
+ + + L+ VL
Sbjct: 103 GRMRVQKVENLNKVL 117
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 40.7 bits (91), Expect = 7e-04
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = +1
Query: 280 RSLEDPRVKELIQVLIDWINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKLDVPEV 459
R+L+D RV + W N L + + D+ ED+ DG +L KLLE+++ KL P
Sbjct: 43 RTLQDERVHIQKKTFTKWCNSFLNRASLEIVDLFEDVGDGIMLMKLLEIISGDKLGKPNR 102
Query: 460 TQSEEGQRQKLSVVL 504
+ + + L+ VL
Sbjct: 103 GRMRVQKVENLNKVL 117
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 34.3 bits (75), Expect = 0.063
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 280 RSLEDPRVKELIQ--VLIDWINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKLDVP 453
++L D R EL+Q W+N L V+D+ D+ DG++L +LL VL+ +L P
Sbjct: 32 KALADER--ELVQKKTFTKWVNSHLVRVSCKVQDLYMDMRDGKMLLRLLAVLSGERLPKP 89
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 34.3 bits (75), Expect = 0.063
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 280 RSLEDPRVKELIQ--VLIDWINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKLDVP 453
++L D R EL+Q W+N L V+D+ D+ DG++L +LL VL+ +L P
Sbjct: 32 KALADER--ELVQKKTFTKWVNSHLVRVSCKVQDLYMDMRDGKMLLRLLAVLSGERLPKP 89
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 34.3 bits (75), Expect = 0.063
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 280 RSLEDPRVKELIQ--VLIDWINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKLDVP 453
++L D R EL+Q W+N L V+D+ D+ DG++L +LL VL+ +L P
Sbjct: 32 KALADER--ELVQKKTFTKWVNSHLVRVSCKVQDLYMDMRDGKMLLRLLAVLSGERLPKP 89
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 34.3 bits (75), Expect = 0.063
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 280 RSLEDPRVKELIQ--VLIDWINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKLDVP 453
++L D R EL+Q W+N L V+D+ D+ DG++L +LL VL+ +L P
Sbjct: 32 KALADER--ELVQKKTFTKWVNSHLVRVSCKVQDLYMDMRDGKMLLRLLAVLSGERLPKP 89
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 34.3 bits (75), Expect = 0.063
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 280 RSLEDPRVKELIQ--VLIDWINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKLDVP 453
++L D R EL+Q W+N L V+D+ D+ DG++L +LL VL+ +L P
Sbjct: 32 KALADER--ELVQKKTFTKWVNSHLVRVSCKVQDLYMDMRDGKMLLRLLAVLSGERLPKP 89
>U39676-3|AAB37032.2| 941|Caenorhabditis elegans Hypothetical
protein C23F12.2 protein.
Length = 941
Score = 33.9 bits (74), Expect = 0.083
Identities = 20/68 (29%), Positives = 40/68 (58%)
Frame = +1
Query: 313 IQVLIDWINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKLDVPEVTQSEEGQRQKL 492
+ +WIN++L + +++D+++DL DG L KL+E+L + + +V + + QKL
Sbjct: 17 LHTFTNWINEQLQGN--VIRDLTQDLSDGVNLIKLVEIL-QGRRYYGKVYDQDPTEIQKL 73
Query: 493 SVVLRAVN 516
V A++
Sbjct: 74 MNVQMALD 81
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 331 WINDELAPHRII--VKDISEDLYDGQVLQKLLEVLTETKLDV 450
WIN L H ++D+ ED+ DG +L L+EVLT L V
Sbjct: 32 WINFHLEEHSSSGRIEDLFEDIRDGVLLCHLIEVLTGEALAV 73
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 331 WINDELAPHRII--VKDISEDLYDGQVLQKLLEVLTETKLDV 450
WIN L H ++D+ ED+ DG +L L+EVLT L V
Sbjct: 32 WINFHLEEHSSSGRIEDLFEDIRDGVLLCHLIEVLTGEALAV 73
>AL117202-21|CAB55087.1| 370|Caenorhabditis elegans Hypothetical
protein Y47D3A.27 protein.
Length = 370
Score = 31.1 bits (67), Expect = 0.58
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 88 KDDKEESFWDXXXXXXXXXXXXEVQDVQAEG-KFAIDSPGSPTAPEIPPEEYSLNENEER 264
K+D+EE +D +VQD +G +++ + E ++ SL + E
Sbjct: 98 KEDEEEGHFDETGNFIFDKKTKDVQDAWLDGIDWSLVKKKAGDQWEGDEDKKSLEDEEP- 156
Query: 265 AIIEPRSLEDPRVKELIQVLIDWINDELAPHRIIVKDISE 384
EP ++ D R KE+ + L++ L P++ + K +SE
Sbjct: 157 ---EPITMSDARKKEIFEQLVNL----LKPNQTVAKALSE 189
>U40800-8|ABB51192.1| 349|Caenorhabditis elegans Hypothetical
protein D2096.7b protein.
Length = 349
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 316 QVLIDWINDELAPHRIIVKDISEDLYD 396
+V+IDW+N ELA +I++ + + +D
Sbjct: 197 EVVIDWLNSELASSSLILRILKSNCHD 223
>U40800-7|AAA81493.2| 343|Caenorhabditis elegans Hypothetical
protein D2096.7a protein.
Length = 343
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 316 QVLIDWINDELAPHRIIVKDISEDLYD 396
+V+IDW+N ELA +I++ + + +D
Sbjct: 191 EVVIDWLNSELASSSLILRILKSNCHD 217
>AC024859-21|AAK29962.4| 490|Caenorhabditis elegans Twik family of
potassium channelsprotein 45, isoform a protein.
Length = 490
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 400 QVLQKLLEVLTETKLDVPEVTQSEEGQ--RQKLSVVLRAVNRVLYGT 534
+ L+ + E++ +D+ ++T + G+ QKL +LRA +R+L T
Sbjct: 83 ETLKSMNEIIKNETMDIIKITLTTNGEDRNQKLGDLLRAYHRILLET 129
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L+ + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERI 85
>Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical
protein W04D2.1b protein.
Length = 894
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +1
Query: 190 IDSPGSPTAPEIPPEEYSLNENEERAIIEPRSLEDPR-VKELIQVLIDWINDELAPHRII 366
+D P + P +Y+ E E + L DP K+ + W N L
Sbjct: 2 VDYYQQPPSYHQPGYDYTQQEEEW----DREGLLDPAWEKQQKKTFTAWCNSHLRKAGTS 57
Query: 367 VKDISEDLYDGQVLQKLLEVLTETKLDVPE 456
+ I ED +G L LLEV++ L P+
Sbjct: 58 IDTIEEDFRNGLKLMLLLEVISGEPLPKPD 87
>Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical
protein W04D2.1a protein.
Length = 920
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +1
Query: 190 IDSPGSPTAPEIPPEEYSLNENEERAIIEPRSLEDPR-VKELIQVLIDWINDELAPHRII 366
+D P + P +Y+ E E + L DP K+ + W N L
Sbjct: 2 VDYYQQPPSYHQPGYDYTQQEEEW----DREGLLDPAWEKQQKKTFTAWCNSHLRKAGTS 57
Query: 367 VKDISEDLYDGQVLQKLLEVLTETKLDVPE 456
+ I ED +G L LLEV++ L P+
Sbjct: 58 IDTIEEDFRNGLKLMLLLEVISGEPLPKPD 87
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -2
Query: 559 RSTSGPV*TFRTEPGSLLSTRQTASDVALLQTASPPARPAWSRSEPPGASGVLVRHTGLH 380
R T GP F + S+ Q + + TA P PAW + P A RH+ +H
Sbjct: 2714 RQTGGPSMFFSEDSSSIEIQNQPLASGYYISTAPAPELPAWFWATCPSAK----RHSPVH 2769
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -2
Query: 559 RSTSGPV*TFRTEPGSLLSTRQTASDVALLQTASPPARPAWSRSEPPGASGVLVRHTGLH 380
R T GP F + S+ Q + + TA P PAW + P A RH+ +H
Sbjct: 2714 RQTGGPSMFFSEDSSSIEIQNQPLASGYYISTAPAPELPAWFWATCPSAK----RHSPVH 2769
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -2
Query: 559 RSTSGPV*TFRTEPGSLLSTRQTASDVALLQTASPPARPAWSRSEPPGASGVLVRHTGLH 380
R T GP F + S+ Q + + TA P PAW + P A RH+ +H
Sbjct: 2714 RQTGGPSMFFSEDSSSIEIQNQPLASGYYISTAPAPELPAWFWATCPSAK----RHSPVH 2769
>U42436-7|AAO61428.2| 223|Caenorhabditis elegans Hypothetical
protein C49H3.4 protein.
Length = 223
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 265 AIIEPRSLEDPRVKELIQV--LIDWINDELAPH-RIIVKDISEDLYDGQVLQKLLEVLTE 435
A+I + +E RV+ I++ + + I H +++KD++E + G+ QK E
Sbjct: 116 AVINQKRIE-VRVRSAIRIDRIFEGIPTTFDEHFNLMMKDVTETVLHGRKAQKEFTNRKE 174
Query: 436 TKLDVPEVTQSEEGQRQKLSV 498
+L +PE + +EG + V
Sbjct: 175 MQLLLPEFLRWKEGGNWPMKV 195
>AF038621-4|AAK71387.2| 1064|Caenorhabditis elegans Hypothetical
protein M116.5 protein.
Length = 1064
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 331 WINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKL 444
W+N L + D+ DL DG L LLE LT ++
Sbjct: 48 WVNKHLTKTDHTIVDLFVDLRDGFALIALLEALTGERI 85
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/81 (23%), Positives = 35/81 (43%)
Frame = +1
Query: 304 KELIQVLIDWINDELAPHRIIVKDISEDLYDGQVLQKLLEVLTETKLDVPEVTQSEEGQR 483
K L+Q ++ + LAP I V +++ + Q + + V T K DV E
Sbjct: 341 KSLVQEMVGSFSKRLAPFGITVGEMTGQMNKEQFMATQVIVCTPEKYDVVTRKGGERAYN 400
Query: 484 QKLSVVLRAVNRVLYGTSKPV 546
Q + +++ +L+ PV
Sbjct: 401 QMVRLLIIDEIHLLHDDRGPV 421
>Z81556-1|CAB04524.1| 965|Caenorhabditis elegans Hypothetical
protein F58G1.1 protein.
Length = 965
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 532 FRTEPGSLLSTRQTASDVALLQTASPPARPAWSRSEPPG 416
F+ + SL S Q S A +A P A AW + PG
Sbjct: 801 FKPDLASLASRPQATSSTASRHSAMPAAPKAWDLNIAPG 839
>Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical
protein C46C2.2 protein.
Length = 520
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 160 QDVQAEGKFAIDSPGSPTAPEIPPEEYSLNENEERAIIEPRSLEDPRVKELIQVL-IDWI 336
++ + K D G P PPE+ + N E+A+ DP++++ I +L + W
Sbjct: 255 EEAEVSRKRIADLAGIEFVPMPPPEKAADNVEPEKAVNICTVFADPQLRKNILILWLMWF 314
Query: 337 NDELAPH--RIIVKDISEDLYDGQVLQKLL 420
+ + + D++++ + GQ L +L
Sbjct: 315 VTGMTAYLTDLCGGDMTKNFWVGQFLSGIL 344
>Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical
protein T06D8.8 protein.
Length = 387
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 271 IEPRSLEDPRVKELIQVLIDWINDELAPHRIIVKDISEDL 390
++PR L++P++ ++ + W ND + I+ K+ E L
Sbjct: 345 VQPRVLDNPQIMQMATRISAWRNDVNSMEGIVSKEAREIL 384
>AF003740-2|AAM15562.2| 330|Caenorhabditis elegans Hypothetical
protein C41D11.4 protein.
Length = 330
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -1
Query: 260 SSFSFKLYSSGGISGAVGLPGESIANLPSA*TSCTSFMRFLRPMVPILSQKD 105
SS SF +S+ +S A L + +L TS +PMVP+ ++D
Sbjct: 23 SSSSFLSHSTSMVSVAASLKRAGVPSLTRTKTSALPIKMEKKPMVPLRIEQD 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.310 0.132 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,561,730
Number of Sequences: 27780
Number of extensions: 245779
Number of successful extensions: 770
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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