Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_L04
         (569 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    26   0.23 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              26   0.23 
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    25   0.53 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.2  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   8.6  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   8.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   8.6  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   8.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.6  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 525 QNPVHCSQHDRQLLTLPFFRLRHLR 451
           + P HCS  DRQ + +   R RHLR
Sbjct: 35  EKPYHCSHCDRQFVQVANLR-RHLR 58


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +2

Query: 2   HEGSLL*ITKISKCLHHALTRQGHLFYLRKTTKKNLSGTRLAP*VARSA*RKYKMFRLRV 181
           H GS L  +++ +CLHH +       ++R+T   N +  + +  V+    R  K   L+ 
Sbjct: 137 HSGSSLTKSRLMRCLHHDIENA----HIRRTLHMNRTSLKTSKIVSYPKSRSRKKGGLKD 192

Query: 182 NL 187
           NL
Sbjct: 193 NL 194


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 166 VQAEGKFAIDSPGSPTAPEIPPE 234
           V  E  F +     PTAP IPPE
Sbjct: 90  VADENGFQVQGSHIPTAPPIPPE 112


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -2

Query: 529 RTEPGSLLSTRQTASDVALLQTASPPARPAWSRSEPPGASGV 404
           R   GS  S        +L +T  PP  P + + + P  SG+
Sbjct: 541 RANSGSTSSGDDELHRASLSKTPQPPQCPRFRKLDSPSDSGI 582


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 22  NNKNFEMSSPRPNSPR 69
           NN+   +S PRP  PR
Sbjct: 99  NNRPVYISQPRPPHPR 114



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 22  NNKNFEMSSPRPNSPR 69
           NN+   +S PRP  PR
Sbjct: 155 NNRPVYISQPRPPHPR 170


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
          protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 19 INNKNFEMSSPRPNSP 66
          ++N N  MSS  P SP
Sbjct: 32 LDNSNMSMSSVGPQSP 47


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
          protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 19 INNKNFEMSSPRPNSP 66
          ++N N  MSS  P SP
Sbjct: 32 LDNSNMSMSSVGPQSP 47


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 382 EDLYDGQVLQKLLEVLTETKLDVPEVTQ 465
           EDL  G  L+ +LE   + +   PE T+
Sbjct: 510 EDLEMGTPLENILESCQQDETHAPEKTK 537


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 75  RCPWRVRAW*RHFE 34
           R PW V  W  HF+
Sbjct: 422 RNPWFVEFWEHHFQ 435


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 202  GSPTAPEIPPEEY 240
            G+P  P I PE+Y
Sbjct: 1177 GAPNVPTILPEQY 1189


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.310    0.132    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,190
Number of Sequences: 438
Number of extensions: 2862
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)