Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_L01
         (544 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   166   1e-43
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   6.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   6.1  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   6.1  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   6.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.1  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  166 bits (404), Expect = 1e-43
 Identities = 77/88 (87%), Positives = 85/88 (96%)
 Frame = +1

Query: 10  TFCPTNLGTTVRASVHIKLPKLAADNAKLEEIASKYHLQVRGTRGEHTEAEGGVYDISNK 189
           TFCPTNLGTTVRASVHIKLPKLAA+ AKLEEIA K++LQVRGTRGEHTEAEGG+YDISNK
Sbjct: 268 TFCPTNLGTTVRASVHIKLPKLAANRAKLEEIAGKFNLQVRGTRGEHTEAEGGIYDISNK 327

Query: 190 RRMGLTEYEAVKEMYDGIAELIKIEKSL 273
           RR+GLTEY+AVKEM+DGIAELIK+EK L
Sbjct: 328 RRLGLTEYQAVKEMHDGIAELIKLEKEL 355


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +1

Query: 184 NKRRMGLTEYEAVKEMYDGIAELIKIEKSL*VVSRS 291
           N  +   ++Y+     Y+G+  ++  + S  VVS+S
Sbjct: 279 NTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSKS 314


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 49  SVHIKLPKLAADNAKLEEIASKYHLQVRGTRGEHTEAEGGV 171
           ++ IKL   A D+ + E+ A+  +     TRG+   + G V
Sbjct: 77  NITIKLDTRAEDSTRGEQEANLGYTNKMSTRGKRPASPGYV 117


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +1

Query: 184 NKRRMGLTEYEAVKEMYDGIAELIKIEKSL*VVSRS 291
           N  +   ++Y+     Y+G+  ++  + S  VVS+S
Sbjct: 279 NTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSKS 314


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +1

Query: 184 NKRRMGLTEYEAVKEMYDGIAELIKIEKSL*VVSRS 291
           N  +   ++Y+     Y+G+  ++  + S  VVS+S
Sbjct: 279 NTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSKS 314


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 118 GTSTRSPPAWHCR 80
           G + + PP WH R
Sbjct: 607 GITIQEPPQWHTR 619


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,682
Number of Sequences: 438
Number of extensions: 2751
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)