Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_K22
         (463 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065288-1|AAH65288.1|  279|Homo sapiens NIBP protein protein.         35   0.16 
BC006206-1|AAH06206.3|  912|Homo sapiens NIBP protein protein.         35   0.16 
BC003650-1|AAH03650.3|  432|Homo sapiens NIBP protein protein.         35   0.16 
AY630619-1|AAV31908.1|  211|Homo sapiens NIK and IKKbetta-bindin...    35   0.16 
AY190606-1|AAO38740.1|  944|Homo sapiens T1 protein.                   35   0.16 
AK128755-1|BAC87600.1| 1246|Homo sapiens protein ( Homo sapiens ...    35   0.16 
AK027689-1|BAB55299.1|  545|Homo sapiens protein ( Homo sapiens ...    35   0.16 
AB067469-1|BAB67775.1| 1176|Homo sapiens KIAA1882 protein protein.     35   0.16 

>BC065288-1|AAH65288.1|  279|Homo sapiens NIBP protein protein.
          Length = 279

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 197 CTAGECLSLGVAIWNHLTRPLHKLCLSVQFYQDYNNGVLSYKLDNRVATAGNN 355
           C  G+ + L V + N   R +    L+V  +QD+ NGV +Y L + V+  G++
Sbjct: 166 CQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSS 218


>BC006206-1|AAH06206.3|  912|Homo sapiens NIBP protein protein.
          Length = 912

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 197 CTAGECLSLGVAIWNHLTRPLHKLCLSVQFYQDYNNGVLSYKLDNRVATAGNN 355
           C  G+ + L V + N   R +    L+V  +QD+ NGV +Y L + V+  G++
Sbjct: 799 CQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSS 851


>BC003650-1|AAH03650.3|  432|Homo sapiens NIBP protein protein.
          Length = 432

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 197 CTAGECLSLGVAIWNHLTRPLHKLCLSVQFYQDYNNGVLSYKLDNRVATAGNN 355
           C  G+ + L V + N   R +    L+V  +QD+ NGV +Y L + V+  G++
Sbjct: 319 CQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSS 371


>AY630619-1|AAV31908.1|  211|Homo sapiens NIK and IKKbetta-binding
           protein protein.
          Length = 211

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 197 CTAGECLSLGVAIWNHLTRPLHKLCLSVQFYQDYNNGVLSYKLDNRVATAGNN 355
           C  G+ + L V + N   R +    L+V  +QD+ NGV +Y L + V+  G++
Sbjct: 98  CQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSS 150


>AY190606-1|AAO38740.1|  944|Homo sapiens T1 protein.
          Length = 944

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 197 CTAGECLSLGVAIWNHLTRPLHKLCLSVQFYQDYNNGVLSYKLDNRVATAGNN 355
           C  G+ + L V + N   R +    L+V  +QD+ NGV +Y L + V+  G++
Sbjct: 831 CQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSS 883


>AK128755-1|BAC87600.1| 1246|Homo sapiens protein ( Homo sapiens cDNA
            FLJ44832 fis, clone BRACE3047801. ).
          Length = 1246

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 197  CTAGECLSLGVAIWNHLTRPLHKLCLSVQFYQDYNNGVLSYKLDNRVATAGNN 355
            C  G+ + L V + N   R +    L+V  +QD+ NGV +Y L + V+  G++
Sbjct: 1133 CQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSS 1185


>AK027689-1|BAB55299.1|  545|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14783 fis, clone NT2RP4000541. ).
          Length = 545

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 197 CTAGECLSLGVAIWNHLTRPLHKLCLSVQFYQDYNNGVLSYKLDNRVATAGNN 355
           C  G+ + L V + N   R +    L+V  +QD+ NGV +Y L + V+  G++
Sbjct: 432 CQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSS 484


>AB067469-1|BAB67775.1| 1176|Homo sapiens KIAA1882 protein protein.
          Length = 1176

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 197  CTAGECLSLGVAIWNHLTRPLHKLCLSVQFYQDYNNGVLSYKLDNRVATAGNN 355
            C  G+ + L V + N   R +    L+V  +QD+ NGV +Y L + V+  G++
Sbjct: 1063 CQVGDPVRLEVRLTNRSPRSVGPFALTVVPFQDHQNGVHNYDLHDTVSFVGSS 1115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,319,492
Number of Sequences: 237096
Number of extensions: 1416369
Number of successful extensions: 2904
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2904
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)