Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_K21
         (262 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              21   2.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   3.3  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          20   4.4  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          20   4.4  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          20   4.4  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          20   4.4  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          20   4.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          20   4.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    20   4.4  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    20   4.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   5.8  

>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -1

Query: 220 VLRSYTCP 197
           VLR+YTCP
Sbjct: 69  VLRAYTCP 76


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +2

Query: 185 QLCLWASVTAQYGEYNDYSHVAGELQ 262
           +L  W + +    +Y+DYS++  +L+
Sbjct: 279 RLRYWRTPSVVVSDYSDYSYLDEKLE 304


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 189 SCHCRHTFSRH 157
           SCH R+  SRH
Sbjct: 229 SCHSRYEDSRH 239


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 189 SCHCRHTFSRH 157
           SCH R+  SRH
Sbjct: 229 SCHSRYEDSRH 239


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 189 SCHCRHTFSRH 157
           SCH R+  SRH
Sbjct: 229 SCHSRYEDSRH 239


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 189 SCHCRHTFSRH 157
           SCH R+  SRH
Sbjct: 229 SCHSRYEDSRH 239


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 189 SCHCRHTFSRH 157
           SCH R+  SRH
Sbjct: 229 SCHSRYEDSRH 239


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 189 SCHCRHTFSRH 157
           SCH R+  SRH
Sbjct: 229 SCHSRYEDSRH 239


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 189 SCHCRHTFSRH 157
           SCH R+  SRH
Sbjct: 229 SCHSRYEDSRH 239


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 115 PGHKLHANVI 86
           PGHKL  N+I
Sbjct: 66  PGHKLPPNII 75


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 212  QLHLPRDKVVIV 177
            +LH+P+DK V V
Sbjct: 1485 KLHIPKDKSVSV 1496


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,686
Number of Sequences: 438
Number of extensions: 1442
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4762122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)