Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_K18
(450 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical... 40 6e-04
AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical ... 40 6e-04
AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical ... 40 6e-04
Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical pr... 39 0.001
U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical p... 36 0.010
U40938-6|AAA81698.1| 655|Caenorhabditis elegans Hypothetical pr... 35 0.031
U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical pr... 34 0.055
Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical p... 32 0.17
U39655-3|AAA80409.2| 718|Caenorhabditis elegans Fatty acid coa ... 31 0.51
AF098989-3|AAK18953.2| 569|Caenorhabditis elegans Hypothetical ... 31 0.51
Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical pr... 29 2.1
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 29 2.1
AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical ... 28 2.7
U80442-3|AAB37665.1| 333|Caenorhabditis elegans Hypothetical pr... 27 6.3
>AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical
protein F46E10.1c protein.
Length = 578
Score = 40.3 bits (90), Expect = 6e-04
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 179 DKLRENCEN-EDSVVLINGDDGRKTTCRQILQGIVNVASGLKKIGVKRGDTVALFCENRD 355
D+LR + D LI +G + T Q+ N+A GL +G+K+GD + ++ N
Sbjct: 25 DRLRSAVDQVPDKEFLIFKREGIRKTYSQVATDAENLACGLLHLGLKKGDRIGIWGPNTY 84
Query: 356 EFIPAALGSICCGATLTTIN 415
E+ S G L IN
Sbjct: 85 EWTTTQFASALAGMVLVNIN 104
>AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical
protein F46E10.1b protein.
Length = 597
Score = 40.3 bits (90), Expect = 6e-04
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 179 DKLRENCEN-EDSVVLINGDDGRKTTCRQILQGIVNVASGLKKIGVKRGDTVALFCENRD 355
D+LR + D LI +G + T Q+ N+A GL +G+K+GD + ++ N
Sbjct: 44 DRLRSAVDQVPDKEFLIFKREGIRKTYSQVATDAENLACGLLHLGLKKGDRIGIWGPNTY 103
Query: 356 EFIPAALGSICCGATLTTIN 415
E+ S G L IN
Sbjct: 104 EWTTTQFASALAGMVLVNIN 123
>AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical
protein F46E10.1a protein.
Length = 623
Score = 40.3 bits (90), Expect = 6e-04
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 179 DKLRENCEN-EDSVVLINGDDGRKTTCRQILQGIVNVASGLKKIGVKRGDTVALFCENRD 355
D+LR + D LI +G + T Q+ N+A GL +G+K+GD + ++ N
Sbjct: 70 DRLRSAVDQVPDKEFLIFKREGIRKTYSQVATDAENLACGLLHLGLKKGDRIGIWGPNTY 129
Query: 356 EFIPAALGSICCGATLTTIN 415
E+ S G L IN
Sbjct: 130 EWTTTQFASALAGMVLVNIN 149
>Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical
protein AH10.1 protein.
Length = 566
Score = 39.1 bits (87), Expect = 0.001
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +2
Query: 173 VIDKLRENCE-NEDSVVLINGDDGRKTTCRQILQGIVN-VASGLKKIGVKRGDTVALFCE 346
++D R + N+D++V I+ + K + ++ VN +A+ L K+G K GD A
Sbjct: 21 ILDSCRIHAAANKDAIVFIDAETTTKKKLYRDVEPTVNSLATALVKLGFKPGDVAAQAFP 80
Query: 347 NRDEFIPAALGSICCGATLT 406
N EF+ A L + CG ++
Sbjct: 81 NCPEFLIAMLAVMKCGGAMS 100
>U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical
protein ZK1127.2 protein.
Length = 565
Score = 36.3 bits (80), Expect = 0.010
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 203 NEDSVVLINGDDGRKTTCRQILQGIVN-VASGLKKIGVKRGDTVALFCENRDEFIPAALG 379
N+D+V I+ + K + ++ VN +A+ L K+G K GD + N EF+ A L
Sbjct: 32 NKDAVCFIDAETTTKKKLYKDVEPTVNSLATALVKLGFKPGDVASQAFPNCPEFLVAMLA 91
Query: 380 SICCGATLT 406
+ CG ++
Sbjct: 92 VMKCGGAMS 100
>U40938-6|AAA81698.1| 655|Caenorhabditis elegans Hypothetical
protein D1009.1a protein.
Length = 655
Score = 34.7 bits (76), Expect = 0.031
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 200 ENEDSVVLINGDDGRKTTCRQILQGIVNVASGLK-KIGVKRGDTVALFCENRDEFIPAAL 376
++ + V +I + GR+ T ++ L + N + L G K GD VALF EN +F L
Sbjct: 92 QHPNKVAIIEIESGRQLTYQE-LNALANQYANLYVSEGYKMGDVVALFMENSIDFFAIWL 150
Query: 377 GSICCGATLTTIN 415
G G IN
Sbjct: 151 GLSKIGVVSAFIN 163
>U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical
protein C25G6.3 protein.
Length = 532
Score = 33.9 bits (74), Expect = 0.055
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 242 RKTTCRQILQGIVNVASGLKKIGVKRGDTVALFCENRDEFIPAALGSICCGATLTTIN 415
R T +++ G A+ + GVK GD + + EN E++ LG GA IN
Sbjct: 113 RCVTYEELVDGSKRTANYMSHHGVKNGDRILMCMENTVEYVLYQLGGFLLGAIPVLIN 170
>Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical
protein F28D1.9 protein.
Length = 684
Score = 32.3 bits (70), Expect = 0.17
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 287 ASGLKKIGVKRGDTVALFCENRDEFIPAALGSICCGATLTTIN 415
A+ + +G + GD VAL+ EN EF+ A +G G IN
Sbjct: 150 ANYFQGLGYRSGDVVALYMENSVEFVAAWMGLAKIGVVTAWIN 192
>U39655-3|AAA80409.2| 718|Caenorhabditis elegans Fatty acid coa
synthetase familyprotein 17 protein.
Length = 718
Score = 30.7 bits (66), Expect = 0.51
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +2
Query: 260 QILQGIVNVASGLKKIGVKRGDTVALFCENRDEFIPAALGSICCGATLTTI 412
Q+ + + +ASGL +G + + + LF E R+E++ AL + + T+
Sbjct: 142 QVDKRVNMIASGLTSLGQQEKEPIILFAETREEWMTTALACMKMNFPIATM 192
>AF098989-3|AAK18953.2| 569|Caenorhabditis elegans Hypothetical
protein F47G6.2 protein.
Length = 569
Score = 30.7 bits (66), Expect = 0.51
Identities = 20/84 (23%), Positives = 36/84 (42%)
Frame = +2
Query: 164 DTFVIDKLRENCENEDSVVLINGDDGRKTTCRQILQGIVNVASGLKKIGVKRGDTVALFC 343
D+ I +L D V + + T +I+ + ++A+G IG+K+GD V +
Sbjct: 32 DSQTIPQLIYTKSEMDRVAAVFDSEKLSLTFSKIVSEMESLAAGFLSIGLKQGDRVLVAG 91
Query: 344 ENRDEFIPAALGSICCGATLTTIN 415
N + + AL G + N
Sbjct: 92 SNHSQVMLCALACSRAGLVFSLAN 115
>Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical
protein C36A4.9b protein.
Length = 670
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 251 TCRQILQGIVNVASGLKKIGVKRGDTVALFCENRDEFIPAALGSICCGA 397
T ++ +V ++ L+ GVKRGD VAL+ E A L GA
Sbjct: 118 TYNELHAQVVQFSAVLRSHGVKRGDVVALYLPMIPELAVAMLACARIGA 166
>Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical
protein C36A4.9a protein.
Length = 680
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 251 TCRQILQGIVNVASGLKKIGVKRGDTVALFCENRDEFIPAALGSICCGA 397
T ++ +V ++ L+ GVKRGD VAL+ E A L GA
Sbjct: 128 TYNELHAQVVQFSAVLRSHGVKRGDVVALYLPMIPELAVAMLACARIGA 176
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 125 DLL*KFQLIYHICDTFVIDKLRENCENEDSV 217
D L + + I IC F +D+LRE CE +S+
Sbjct: 382 DKLTEMERIERICIGFTVDQLRELCEKVESL 412
>AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical
protein Y67A10A.11 protein.
Length = 292
Score = 28.3 bits (60), Expect = 2.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 386 CCGATLTTINGWVH 427
CC TLTTI WVH
Sbjct: 91 CCTGTLTTIANWVH 104
>U80442-3|AAB37665.1| 333|Caenorhabditis elegans Hypothetical
protein T20F5.4 protein.
Length = 333
Score = 27.1 bits (57), Expect = 6.3
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -1
Query: 351 RFSQNRATVSPRFTPIFFKPLATFTIPCKI 262
RFS R+ R PI KP F PCKI
Sbjct: 266 RFSPARSPPVRRALPIELKPTQHFAQPCKI 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,333,563
Number of Sequences: 27780
Number of extensions: 178181
Number of successful extensions: 499
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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