Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_K12
         (399 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071262-1|AAL48884.1|   94|Drosophila melanogaster RE29909p pro...    28   4.0  
AY071145-1|AAL48767.1|  520|Drosophila melanogaster RE18068p pro...    28   4.0  
AE014298-1250|AAF46427.2|   94|Drosophila melanogaster CG10962-P...    28   4.0  
AE014297-1231|AAF54580.2|  520|Drosophila melanogaster CG4674-PA...    28   4.0  
AY061070-1|AAL28618.1|  606|Drosophila melanogaster LD04071p pro...    28   5.3  
AE014296-2547|AAF49610.2|  606|Drosophila melanogaster CG32149-P...    28   5.3  
AE014296-2546|AAN11778.1|  604|Drosophila melanogaster CG32149-P...    28   5.3  
AE014296-2545|AAF49609.2|  896|Drosophila melanogaster CG32149-P...    28   5.3  

>AY071262-1|AAL48884.1|   94|Drosophila melanogaster RE29909p
           protein.
          Length = 94

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 277 GGDREDNSRKEGESGGGNPTS*SGRS 354
           GG R+ + R EG++G GNP     RS
Sbjct: 19  GGHRDRSGRNEGQAGRGNPPGGRRRS 44


>AY071145-1|AAL48767.1|  520|Drosophila melanogaster RE18068p
           protein.
          Length = 520

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 359 RSLLPLQLVGFPPPLSPSFRELSSLSPPP 273
           +S  P  L  +PPP SP +  L +L+PPP
Sbjct: 430 QSYPPPHLPAYPPPESPQY-SLLALTPPP 457


>AE014298-1250|AAF46427.2|   94|Drosophila melanogaster CG10962-PA,
           isoform A protein.
          Length = 94

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 277 GGDREDNSRKEGESGGGNPTS*SGRS 354
           GG R+ + R EG++G GNP     RS
Sbjct: 19  GGHRDRSGRNEGQAGRGNPPGGRRRS 44


>AE014297-1231|AAF54580.2|  520|Drosophila melanogaster CG4674-PA
           protein.
          Length = 520

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 359 RSLLPLQLVGFPPPLSPSFRELSSLSPPP 273
           +S  P  L  +PPP SP +  L +L+PPP
Sbjct: 430 QSYPPPHLPAYPPPESPQY-SLLALTPPP 457


>AY061070-1|AAL28618.1|  606|Drosophila melanogaster LD04071p
           protein.
          Length = 606

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +1

Query: 274 GGGDREDNSRKEGESGGGNPTS*SGRSDRLKLRNLTTS 387
           GGG+R   S   G SGGG   S  G     KL+  T S
Sbjct: 489 GGGERRTGSGAAGGSGGGASGSAVGNPTPPKLKQRTCS 526


>AE014296-2547|AAF49610.2|  606|Drosophila melanogaster CG32149-PA,
           isoform A protein.
          Length = 606

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +1

Query: 274 GGGDREDNSRKEGESGGGNPTS*SGRSDRLKLRNLTTS 387
           GGG+R   S   G SGGG   S  G     KL+  T S
Sbjct: 489 GGGERRTGSGAAGGSGGGASGSAVGNPTPPKLKQRTCS 526


>AE014296-2546|AAN11778.1|  604|Drosophila melanogaster CG32149-PB,
           isoform B protein.
          Length = 604

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +1

Query: 274 GGGDREDNSRKEGESGGGNPTS*SGRSDRLKLRNLTTS 387
           GGG+R   S   G SGGG   S  G     KL+  T S
Sbjct: 489 GGGERRTGSGAAGGSGGGASGSAVGNPTPPKLKQRTCS 526


>AE014296-2545|AAF49609.2|  896|Drosophila melanogaster CG32149-PC,
           isoform C protein.
          Length = 896

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +1

Query: 274 GGGDREDNSRKEGESGGGNPTS*SGRSDRLKLRNLTTS 387
           GGG+R   S   G SGGG   S  G     KL+  T S
Sbjct: 489 GGGERRTGSGAAGGSGGGASGSAVGNPTPPKLKQRTCS 526


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,998,181
Number of Sequences: 53049
Number of extensions: 233269
Number of successful extensions: 960
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)