Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_K06
(292 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 82 6e-17
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 82 8e-17
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 80 3e-16
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 79 4e-16
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 79 6e-16
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 76 6e-15
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 55 8e-09
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 46 5e-06
11_01_0419 + 3226224-3226756,3228010-3228169,3228256-3228435,322... 28 1.1
03_05_0615 + 26137785-26138593,26139307-26141368 27 3.3
12_02_0329 + 17585046-17585561 26 4.4
09_02_0513 - 10105746-10106438,10106523-10107040,10107156-101076... 26 4.4
06_02_0307 + 14122217-14122459 26 4.4
03_05_0696 - 26856413-26856416,26857917-26858524,26859041-268591... 26 4.4
03_05_0521 + 25160245-25160883 26 4.4
03_05_0092 - 20714102-20717902 26 4.4
11_01_0319 - 2396835-2396951,2397035-2397105,2397219-2397297,239... 26 5.8
10_01_0132 - 1601421-1601657,1601761-1601922,1602812-1603721,160... 26 5.8
03_05_0314 - 23035295-23036342,23036552-23036616 26 5.8
03_02_0388 - 8030065-8030086,8030372-8030658 26 5.8
02_05_1296 - 35535303-35535551 25 7.7
02_02_0238 + 8163922-8164362,8165008-8165118,8165205-8165249,816... 25 7.7
02_01_0384 - 2781362-2782299,2782320-2782428 25 7.7
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 82.2 bits (194), Expect = 6e-17
Identities = 42/71 (59%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Frame = +1
Query: 85 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKTVVG 258
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYK V+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 259 ARRSSWRVISS 291
ARR+SWR+ISS
Sbjct: 62 ARRASWRIISS 72
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 81.8 bits (193), Expect = 8e-17
Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Frame = +1
Query: 85 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKTVVG 258
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYK V+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 259 ARRSSWRVISS 291
ARR+SWR+ISS
Sbjct: 280 ARRASWRIISS 290
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 80.2 bits (189), Expect = 3e-16
Identities = 42/70 (60%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Frame = +1
Query: 88 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKTVVGA 261
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYK V+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 262 RRSSWRVISS 291
RR+SWR+ISS
Sbjct: 62 RRASWRIISS 71
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 79.4 bits (187), Expect = 4e-16
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 2/66 (3%)
Frame = +1
Query: 100 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKTVVGARRSS 273
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYK V+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 274 WRVISS 291
WR++SS
Sbjct: 61 WRIVSS 66
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 79.0 bits (186), Expect = 6e-16
Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 5/67 (7%)
Frame = +1
Query: 106 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKTVVGARRS 270
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYK V+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 271 SWRVISS 291
SWR++SS
Sbjct: 70 SWRIVSS 76
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 75.8 bits (178), Expect = 6e-15
Identities = 34/63 (53%), Positives = 47/63 (74%)
Frame = +1
Query: 103 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKTVVGARRSSWRV 282
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 283 ISS 291
+ S
Sbjct: 63 LES 65
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 55.2 bits (127), Expect = 8e-09
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +1
Query: 196 GVELSNEERNLLSVAYKTVVGARRSSWRVISS 291
G EL+ EERNLLSVAYK V+GARR+SWR+ISS
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISS 49
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 46.0 bits (104), Expect = 5e-06
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +1
Query: 163 MAAAMKEVTETGVELSNEERNLLSVAYKTVVGARRSSWRVISS 291
M AM V + L+ EERNLLSV YK ++GA+R++ R+I S
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGS 43
>11_01_0419 +
3226224-3226756,3228010-3228169,3228256-3228435,
3228525-3228659,3229262-3229344,3229442-3229535,
3229649-3229735
Length = 423
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 165 GGRDEGSDGNRRRAQQ-RRKKPSFRCL*NCGRRPTVIM 275
G E +DG RRR++Q RR++P R G RP++ M
Sbjct: 91 GSAAEAADGGRRRSRQGRRRRPQRRR--RRGSRPSLFM 126
>03_05_0615 + 26137785-26138593,26139307-26141368
Length = 956
Score = 26.6 bits (56), Expect = 3.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 127 AKLAEQAE-RYDDMAAAMKEVTETGVELSNEERNLLSVAYKTVVGARRSSWR 279
+KLA AE +Y D+ +E+T ELS+ LL +A + ++ WR
Sbjct: 13 SKLATLAEQKYGDVRRIRREITFLTDELSSMNALLLKLADMEELDSQLKEWR 64
>12_02_0329 + 17585046-17585561
Length = 171
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 165 GGRDEGSDGNRRRAQQRRKKPS 230
GG+ G DG RR ++RR++ S
Sbjct: 139 GGKGGGGDGRWRRGKERRREQS 160
>09_02_0513 -
10105746-10106438,10106523-10107040,10107156-10107695,
10107791-10108103
Length = 687
Score = 26.2 bits (55), Expect = 4.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 73 QYLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVA 240
Q +PS+ DKE L +A + D + +KE ++ + NE RN+L +A
Sbjct: 326 QSMPSAMYIPDKEGLTP-LHVAAKMGHLDVIQDMLKECPDSAELVDNEGRNILHLA 380
>06_02_0307 + 14122217-14122459
Length = 80
Score = 26.2 bits (55), Expect = 4.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 162 HGGRDEGSDGNRRRAQQRR 218
HG DE DG+ RR++QRR
Sbjct: 62 HGIDDEDCDGDGRRSRQRR 80
>03_05_0696 -
26856413-26856416,26857917-26858524,26859041-26859101,
26859181-26859557,26860314-26861156
Length = 630
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -2
Query: 228 KVSFFVAELDAGFRHFLHRGRHVIISFSLLSQLGA 124
K+ + E+D ++H+ H+ + V+ SF +++ GA
Sbjct: 274 KLMAMLDEVDRKYKHYYHQMQIVVSSFDMVAGSGA 308
>03_05_0521 + 25160245-25160883
Length = 212
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 168 GRDEGSDGNRRRAQQRRKKP 227
GR G DG R R ++RR+ P
Sbjct: 99 GRGGGGDGGRSRGRERRRLP 118
>03_05_0092 - 20714102-20717902
Length = 1266
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -2
Query: 180 LHRGRHVIISFSLLSQLGALY*FLLIDGHRGRWKILISLMPLLEXXXXX*LANCK 16
LH +++ S+ ++L +L L IDG R + L+ LE + NCK
Sbjct: 1131 LHLENTLLLKLSMFNRLRSLE-ILEIDGSRSFFDDLVEEFEWLEKLQALSIRNCK 1184
>11_01_0319 -
2396835-2396951,2397035-2397105,2397219-2397297,
2397417-2397458,2397670-2397723,2397836-2397868,
2397959-2398039,2398144-2398230,2398313-2398388,
2398633-2398808,2398912-2399034,2399249-2399361,
2399521-2399632,2400054-2400273,2401986-2402314,
2402408-2402713,2403580-2403878,2404079-2404181,
2404266-2404369,2404840-2404906,2404911-2405076,
2405241-2405956
Length = 1157
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +3
Query: 171 RDEGS-DGNRRRAQQRRKKPS 230
RD G D RRR+ QRRK+P+
Sbjct: 72 RDRGGHDERRRRSPQRRKEPT 92
>10_01_0132 -
1601421-1601657,1601761-1601922,1602812-1603721,
1604587-1604651,1604704-1604746,1605086-1605128,
1605874-1605955,1606270-1606464,1606567-1606721,
1611207-1611435,1611538-1611693,1612539-1613476,
1614946-1614967
Length = 1078
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 38 PFYPSNKGISEINIFHRPRCPSIRRN---*YNAPSWL 139
PFY + K +S+ ++ H PR P +RRN +P WL
Sbjct: 633 PFYNA-KWLSKCSL-HHPRPPPVRRNASAPLGSPGWL 667
>03_05_0314 - 23035295-23036342,23036552-23036616
Length = 370
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 73 QYL-PSSTMSVDKEELVQRAKLAEQAERYDDMAAAM--KEVT 189
QY+ SST S+ KE+L +AK E+ R A + KE+T
Sbjct: 157 QYINQSSTASIKKEDLALKAKEEEEENRKSKSKAEIDDKEMT 198
>03_02_0388 - 8030065-8030086,8030372-8030658
Length = 102
Score = 25.8 bits (54), Expect = 5.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 168 GRDEGSDGNRRRAQQRRKKP 227
GRD+ +DGN R Q R P
Sbjct: 81 GRDKNNDGNTNRRQSRANGP 100
>02_05_1296 - 35535303-35535551
Length = 82
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 161 SSYRSACSANLARCTSSSLSTDIVDD 84
+S SA A+L RC+ +LSTD DD
Sbjct: 10 ASVTSAFFASLERCSCINLSTDDDDD 35
>02_02_0238 +
8163922-8164362,8165008-8165118,8165205-8165249,
8166066-8166138,8166215-8166327,8166430-8166489,
8167287-8167334,8167422-8167490,8167618-8167679,
8167771-8167828
Length = 359
Score = 25.4 bits (53), Expect = 7.7
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +3
Query: 165 GGRDEGSDGNRR---RAQQRRKKPSFRCL*NCGRRPT 266
GGRD SDG+ + Q RR++ F N GRR T
Sbjct: 127 GGRDSSSDGSSNGGGQPQNRRRRSGF----NQGRRRT 159
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 100 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVEL 207
VDK+EL A +AEQ R+D A + + G EL
Sbjct: 79 VDKQELASPAAVAEQ--RHDVAVAEAADADDLGDEL 112
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,846,094
Number of Sequences: 37544
Number of extensions: 133459
Number of successful extensions: 461
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 316296968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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