Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_K06
(292 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 115 5e-27
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 115 5e-27
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 115 7e-27
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 115 7e-27
AF039713-2|AAB96726.2| 476|Caenorhabditis elegans Hypothetical ... 27 3.0
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 27 3.0
Z81128-10|CAB03395.3| 467|Caenorhabditis elegans Hypothetical p... 26 5.2
Z81033-3|CAD36479.1| 467|Caenorhabditis elegans Hypothetical pr... 26 5.2
Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical pr... 26 5.2
Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical pr... 26 5.2
Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical pr... 26 5.2
AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calc... 26 5.2
AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calc... 26 5.2
AL023824-1|CAD36497.1| 467|Caenorhabditis elegans Hypothetical ... 26 5.2
AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPas... 26 5.2
AF487547-1|AAL93258.1| 467|Caenorhabditis elegans ARID DNA bind... 26 5.2
U42436-4|AAF99896.2| 297|Caenorhabditis elegans Hypothetical pr... 25 6.8
AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacti... 25 6.8
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 25 9.1
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 115 bits (277), Expect = 5e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +1
Query: 94 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKTVVGARRSS 273
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAYK VVGARRSS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60
Query: 274 WRVISS 291
WRVISS
Sbjct: 61 WRVISS 66
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 115 bits (277), Expect = 5e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +1
Query: 94 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKTVVGARRSS 273
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAYK VVGARRSS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60
Query: 274 WRVISS 291
WRVISS
Sbjct: 61 WRVISS 66
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 115 bits (276), Expect = 7e-27
Identities = 59/66 (89%), Positives = 60/66 (90%)
Frame = +1
Query: 94 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKTVVGARRSS 273
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAYK VVGARRSS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60
Query: 274 WRVISS 291
WRVISS
Sbjct: 61 WRVISS 66
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 115 bits (276), Expect = 7e-27
Identities = 59/66 (89%), Positives = 60/66 (90%)
Frame = +1
Query: 94 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKTVVGARRSS 273
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAYK VVGARRSS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60
Query: 274 WRVISS 291
WRVISS
Sbjct: 61 WRVISS 66
>AF039713-2|AAB96726.2| 476|Caenorhabditis elegans Hypothetical
protein F57B10.9 protein.
Length = 476
Score = 26.6 bits (56), Expect = 3.0
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 82 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKT--VV 255
P+ T+++ ++R +L E+ KE E ELS EE+N +S +
Sbjct: 206 PNMTVAILLSSDIER-RLIEELHIVLREFTDFKEQAEPSTELSKEEKNRISTTISNFLIK 264
Query: 256 GARRSSWRV 282
G ++ +W V
Sbjct: 265 GGQKIAWGV 273
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 187 TETGVELSNEERNLLSVA 240
TE G ELSN ERN + VA
Sbjct: 119 TEDGAELSNRERNRMLVA 136
>Z81128-10|CAB03395.3| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 186 DGNRRRAQQRRKKPSF 233
DGNRR A RR PSF
Sbjct: 286 DGNRREAPGRRTAPSF 301
>Z81033-3|CAD36479.1| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 186 DGNRRRAQQRRKKPSF 233
DGNRR A RR PSF
Sbjct: 286 DGNRREAPGRRTAPSF 301
>Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical
protein W09C2.3c protein.
Length = 1249
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 175 MKEVTETGV-ELSNEERNLLSVAYKTVV 255
+KE+T T + E++N + VAYKT++
Sbjct: 637 LKEITSTIIHEMANSGLRTICVAYKTII 664
>Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical
protein W09C2.3b protein.
Length = 1228
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 175 MKEVTETGV-ELSNEERNLLSVAYKTVV 255
+KE+T T + E++N + VAYKT++
Sbjct: 616 LKEITSTIIHEMANSGLRTICVAYKTII 643
>Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical
protein W09C2.3a protein.
Length = 1252
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 175 MKEVTETGV-ELSNEERNLLSVAYKTVV 255
+KE+T T + E++N + VAYKT++
Sbjct: 640 LKEITSTIIHEMANSGLRTICVAYKTII 667
>AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calcium
ATPase (136.9kD) (mca-1) protein.
Length = 1249
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 175 MKEVTETGV-ELSNEERNLLSVAYKTVV 255
+KE+T T + E++N + VAYKT++
Sbjct: 637 LKEITSTIIHEMANSGLRTICVAYKTII 664
>AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calcium
ATPase (136.6kD) (mca-1) protein.
Length = 1252
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 175 MKEVTETGV-ELSNEERNLLSVAYKTVV 255
+KE+T T + E++N + VAYKT++
Sbjct: 640 LKEITSTIIHEMANSGLRTICVAYKTII 667
>AL023824-1|CAD36497.1| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 186 DGNRRRAQQRRKKPSF 233
DGNRR A RR PSF
Sbjct: 286 DGNRREAPGRRTAPSF 301
>AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPase
protein.
Length = 1228
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 175 MKEVTETGV-ELSNEERNLLSVAYKTVV 255
+KE+T T + E++N + VAYKT++
Sbjct: 616 LKEITSTIIHEMANSGLRTICVAYKTII 643
>AF487547-1|AAL93258.1| 467|Caenorhabditis elegans ARID DNA binding
protein CFI-1 protein.
Length = 467
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 186 DGNRRRAQQRRKKPSF 233
DGNRR A RR PSF
Sbjct: 286 DGNRREAPGRRTAPSF 301
>U42436-4|AAF99896.2| 297|Caenorhabditis elegans Hypothetical
protein C49H3.9 protein.
Length = 297
Score = 25.4 bits (53), Expect = 6.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 83 HRPRCPSIRRN*YNAPSWLSRLNDMM 160
H CP I + + PSW S LN ++
Sbjct: 233 HERWCPRIEMDDHGEPSWQSDLNTVL 258
>AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacting
protein (scaffoldprotein) protein 1 protein.
Length = 998
Score = 25.4 bits (53), Expect = 6.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 174 DEGSDGNRRRAQQRRKKPS--FRCL*NCGRRPTVIMASHF 287
++G +GNRRR QQR+ S C + + PT + S F
Sbjct: 740 EDGINGNRRRRQQRKYDSSGVSSCTTSDSQNPTHRVQSAF 779
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 25.0 bits (52), Expect = 9.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 103 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSN 213
D +LV + AE D+A A+ EVT+ EL N
Sbjct: 646 DVSKLVDISMDTNSAEVAADLAKAVGEVTQLSAELQN 682
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,370,318
Number of Sequences: 27780
Number of extensions: 102874
Number of successful extensions: 322
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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