Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_K06
         (292 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           22   1.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   3.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    19   9.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    19   9.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          19   9.4  

>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = +1

Query: 58  GHQ*NQYLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETG---VELSNEERNL 228
           GH  N +  S    V KEEL    KL +  E  D + ++   VT  G   + LS  +R +
Sbjct: 24  GHDGNLWAKSEGFEVSKEEL---TKLVQGFEEQDILTSS--GVTLAGNRYIYLSGTDRVI 78

Query: 229 LSVAYKTVVGARRSSWRVISS 291
            +   K  V   +++  V+ S
Sbjct: 79  RAKLGKVGVHCMKTTQAVVVS 99


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 260 PDGHHGESFPL 292
           P GHH  S PL
Sbjct: 516 PSGHHASSAPL 526


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 252 HSFISNGKKVSFFVAELDAGF 190
           H++    + V  F  E+DAG+
Sbjct: 612 HTYEDPNQAVREFAREIDAGY 632


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 210 QRRKKPSFRC 239
           +RR +P+FRC
Sbjct: 414 RRRYQPAFRC 423


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 94  SWTMEDID 71
           SWT ED+D
Sbjct: 410 SWTQEDMD 417


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,577
Number of Sequences: 438
Number of extensions: 1154
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5869407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)