Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_K01
(573 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 285 1e-77
02_04_0017 + 18937774-18937864,18938505-18940945 285 1e-77
01_06_0662 + 30987187-30987277,30987825-30990214 283 9e-77
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 249 1e-66
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 193 7e-50
02_04_0148 - 20198407-20201424 58 5e-09
03_05_0511 + 25056018-25059107 58 7e-09
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 39 0.003
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 35 0.053
10_01_0230 - 2433082-2434674 30 1.5
07_01_0468 + 3537669-3537890,3539003-3539130,3539398-3539621,353... 30 1.5
01_02_0022 + 10290033-10290407,10290497-10290848,10290923-102910... 29 2.0
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 29 2.6
07_03_1219 + 24960043-24960133,24960304-24960336,24962258-249624... 28 4.6
01_01_1190 + 9463973-9465732,9466210-9466440,9467664-9467793,946... 28 4.6
11_06_0282 - 21884702-21885085 28 6.1
11_06_0266 - 21791757-21792982,21793154-21793178 28 6.1
07_03_0698 - 20765305-20768526 28 6.1
01_05_0175 - 18936752-18937621,18938855-18941641 28 6.1
10_08_0621 + 19328357-19329545,19329967-19329986 27 8.0
05_07_0228 - 28526885-28527046,28527151-28527241,28528315-285284... 27 8.0
03_05_1048 - 29950860-29951396,29951810-29952676 27 8.0
02_05_0263 - 27257150-27259213 27 8.0
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 285 bits (700), Expect = 1e-77
Identities = 128/188 (68%), Positives = 158/188 (84%)
Frame = +1
Query: 10 VSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYD 189
V E+S + +SKSPNKHNRL+M+A+P+ EGL E IDDG++ PRDD K R++ LS+++ +D
Sbjct: 568 VLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWD 627
Query: 190 LTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGAMAEENLRGVRF 369
A+KIWCFGPE TGPN++VD KGVQYLNEIKDSVVAGFQWA+KEGA+AEEN+RG+ F
Sbjct: 628 KDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICF 687
Query: 370 NIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGV 549
+ DV LH DAIHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGV
Sbjct: 688 EVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGV 747
Query: 550 LNRRRGHV 573
LN++RGHV
Sbjct: 748 LNQKRGHV 755
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 285 bits (700), Expect = 1e-77
Identities = 128/188 (68%), Positives = 158/188 (84%)
Frame = +1
Query: 10 VSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYD 189
V E+S + +SKSPNKHNRL+M+A+P+ EGL E IDDG++ PRDD K R++ LS+++ +D
Sbjct: 568 VLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWD 627
Query: 190 LTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGAMAEENLRGVRF 369
A+KIWCFGPE TGPN++VD KGVQYLNEIKDSVVAGFQWA+KEGA+AEEN+RG+ F
Sbjct: 628 KDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICF 687
Query: 370 NIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGV 549
+ DV LH DAIHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGV
Sbjct: 688 EVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGV 747
Query: 550 LNRRRGHV 573
LN++RGHV
Sbjct: 748 LNQKRGHV 755
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 283 bits (693), Expect = 9e-77
Identities = 130/190 (68%), Positives = 159/190 (83%), Gaps = 2/190 (1%)
Frame = +1
Query: 10 VSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYD 189
V E+S + +SKSPNKHNRL+M+A+PM EGLPE ID+G++ PRDD K R++ LS+++ +D
Sbjct: 564 VLEKSCRTVMSKSPNKHNRLYMEARPMEEGLPEAIDEGRIGPRDDPKVRSKILSEEFGWD 623
Query: 190 LTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGAMAEENL--RGV 363
A+KIWCFGPE TGPNI+VD KGVQYLNEIKDSVVAGFQWA+KEGA+AEEN+ RG+
Sbjct: 624 KDLAKKIWCFGPETTGPNIVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGRGI 683
Query: 364 RFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIY 543
F + DV LH+DAIHRGGGQIIPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIY
Sbjct: 684 CFEVCDVILHSDAIHRGGGQIIPTARRVIYAAQLTAKPRLLEPVYLVEIQAPENALGGIY 743
Query: 544 GVLNRRRGHV 573
VLN++RGHV
Sbjct: 744 SVLNQKRGHV 753
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 249 bits (610), Expect = 1e-66
Identities = 117/196 (59%), Positives = 150/196 (76%), Gaps = 8/196 (4%)
Frame = +1
Query: 10 VSEESDQMCLSKSPNKHNRLFMKAQPMP-EGLPED-------IDDGKVNPRDDFKTRARY 165
V++ S + +SKSPNKHNRL+M+A+P+ E L +D IDD ++ P+DD K R +
Sbjct: 570 VTKNSCRTVMSKSPNKHNRLYMEARPLDKEDLQQDEPSLCKAIDDERIGPKDDIKERGKI 629
Query: 166 LSDKYEYDLTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGAMAE 345
LS+++ +D A+KIW FGPE GPN+LVD KGVQYL+EIKDSVVAGFQWA+KEGA+AE
Sbjct: 630 LSEEFGWDKDLAKKIWAFGPETKGPNLLVDMCKGVQYLSEIKDSVVAGFQWASKEGALAE 689
Query: 346 ENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEV 525
EN+RGV F + DVTLH+D+IHRGGGQ+IPT RR +YA LTA PRLMEP+Y +IQ P+
Sbjct: 690 ENMRGVCFELCDVTLHSDSIHRGGGQLIPTARRAMYAAQLTASPRLMEPMYQVDIQVPKT 749
Query: 526 AVGGIYGVLNRRRGHV 573
AVG +YGVLN R G +
Sbjct: 750 AVGNVYGVLNSRNGEL 765
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 193 bits (471), Expect = 7e-50
Identities = 91/192 (47%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Frame = +1
Query: 10 VSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYD 189
V + S C +++PNK N++ M A+P+ +GL EDI++G V+ K + +Y++D
Sbjct: 690 VVDTSSMKCFAETPNKRNKITMVAEPLEKGLAEDIENGLVSLDSRQKEITDFFRQRYQWD 749
Query: 190 LTEARKIWCFGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGAMAEENLR 357
+ AR IW FGPE GPNIL+D + V+ LN +KDS+V GFQW A+EG + +E +R
Sbjct: 750 VLAARSIWAFGPEKQGPNILLDDTLSVEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIR 809
Query: 358 GVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGG 537
V+F I + + + +HRGGGQIIPT RR +Y+ L A PRLMEPVY EIQ P V
Sbjct: 810 NVKFKILNANIAPEPLHRGGGQIIPTARRVVYSAFLMANPRLMEPVYYIEIQTPIDCVSA 869
Query: 538 IYGVLNRRRGHV 573
IY VL+RRRGHV
Sbjct: 870 IYTVLSRRRGHV 881
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 58.0 bits (134), Expect = 5e-09
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Frame = +1
Query: 286 IKDSVVAGFQWAAKEGAMAEENLRGVRFNIYDVTL---------HTDAIHRGGGQIIPTT 438
+K+S+ GFQ A G + E G+ F + L +D GQII
Sbjct: 790 VKNSIATGFQLATNAGPLCGEPTWGLIFLVKPYILPDSADASNNQSDHYSTFSGQIITAV 849
Query: 439 RRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV 573
R A +L ++PRL+EP+Y CE+ P +G +Y VL R V
Sbjct: 850 REACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARV 894
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 57.6 bits (133), Expect = 7e-09
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Frame = +1
Query: 286 IKDSVVAGFQWAAKEGAMAEENLRGVRFNI--YDVTLHTDAIHRG------GGQIIPTTR 441
+++ +V+GFQ A G + +E + G+ F + Y H+DA + GQ+I +
Sbjct: 815 LRNCIVSGFQLATNAGPLCDEPMWGLVFVVEPYIFCDHSDAANHSEQYNIFSGQVITAVK 874
Query: 442 RCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV 573
++ +PRL+E +Y CE+ P +G Y VL+R+R V
Sbjct: 875 EACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRARV 918
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 38.7 bits (86), Expect = 0.003
Identities = 31/104 (29%), Positives = 44/104 (42%)
Frame = +1
Query: 262 KGVQYLNEIKDSVVAGFQWAAKEGAMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTR 441
KG E V+ G + + G +A + +R + D + H QI R
Sbjct: 580 KGGAVPKEYVPGVMKGIEESLPNGVLAGYPVVDLRAVLVDGSYHDVDSSVLAFQI--AAR 637
Query: 442 RCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV 573
L A PRL+EP+ E+ PE +G + G LN RRG V
Sbjct: 638 GAFREGLRKAGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQV 681
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 34.7 bits (76), Expect = 0.053
Identities = 21/91 (23%), Positives = 40/91 (43%)
Frame = +1
Query: 295 SVVAGFQWAAKEGAMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQ 474
++ GF+ A G++ + +R + D H A+ + C A+
Sbjct: 613 AIEKGFKEACNSGSLIGHPVENIRIVLTDGASH--AVDSSELAFKLASIYAFRQCYAAAR 670
Query: 475 PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRG 567
P ++EPV E++ P G + G +N+R+G
Sbjct: 671 PVILEPVMKVELKVPTEFQGTVTGDMNKRKG 701
>10_01_0230 - 2433082-2434674
Length = 530
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/81 (25%), Positives = 32/81 (39%)
Frame = +1
Query: 133 PRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGF 312
PR+ R D D+T R+I P G G I +L ++VA F
Sbjct: 434 PREFLPERFMAGGDGEGVDITGTREIRMM-PFGAGRRICPGLGVATLHLEYFVANMVAAF 492
Query: 313 QWAAKEGAMAEENLRGVRFNI 375
+W A EG + + + F +
Sbjct: 493 EWRAAEGEAVDVDGEKLEFTV 513
>07_01_0468 +
3537669-3537890,3539003-3539130,3539398-3539621,
3539660-3540062,3540398-3540473
Length = 350
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = -1
Query: 261 RAVDEDVRSGALGAEAPDLTRFGQIVLVLVAEVTGAGLEVVTGVHFAV 118
RA+DED AL E DL R + LVLV E G G+ G F V
Sbjct: 160 RAIDEDELLDALDGE--DLERAHEQALVLVHEAGGIGVGHADGKVFGV 205
>01_02_0022 +
10290033-10290407,10290497-10290848,10290923-10291070,
10291145-10291225,10291651-10291822,10292120-10292158,
10292384-10292543,10292676-10292779,10292979-10293278
Length = 576
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = -1
Query: 429 NDLTATSVNGVSVKGDVINVESNPSQVLLGHGAFLGGPLEPGDDRVLDLVQVLHTLRAVD 250
+D T +K D++ + N + +L G P +PGD DL+ + LRA
Sbjct: 118 SDPVLTMAVDSGLKDDLVFGDPNAPRFVLWEGKLRPVPSKPGDLPFFDLMSIPGKLRA-- 175
Query: 249 EDVRSGALGAEAP 211
GALG AP
Sbjct: 176 ---GLGALGVRAP 185
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 466 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV 573
T +L EP + ++ PE +G + +L +RRG +
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQM 532
>07_03_1219 +
24960043-24960133,24960304-24960336,24962258-24962486,
24963183-24963309,24963530-24963869,24964806-24965095
Length = 369
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 4 RGVSEESDQMCLSKSPNKHNRLFMKAQPMPEGLPE 108
R E + +CL PN+H + + A+ +P LPE
Sbjct: 37 RQCDPEKENLCLYGFPNEHWEVNLPAEEVPPELPE 71
>01_01_1190 +
9463973-9465732,9466210-9466440,9467664-9467793,
9468723-9468888,9469528-9469859,9470284-9470513,
9471535-9471613,9471689-9471865
Length = 1034
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 441 EMPVRVSVDRAAQAYGTRVPLRDPVSGGGG 530
++PVR V R A A G+R P GGGG
Sbjct: 68 DIPVRHGVRRGAGAAGSRAPSGFVFGGGGG 97
>11_06_0282 - 21884702-21885085
Length = 127
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 109 DIDDGKVNPRDDFKTRARYLSDKYEYDLTEARK 207
++D G V+P DDF ++ Y+ + DL RK
Sbjct: 43 EVDAGVVDPDDDFYYKSLYVLHESSKDLRHVRK 75
>11_06_0266 - 21791757-21792982,21793154-21793178
Length = 416
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 3/21 (14%)
Frame = -3
Query: 571 RARAVCSARR---RYHRPPPP 518
R R+VC A R R HRPPPP
Sbjct: 40 RLRSVCQAWRAAARLHRPPPP 60
>07_03_0698 - 20765305-20768526
Length = 1073
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 352 LRGVRFNIYDVTLHTDAIHRG----GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQ 513
L G + ++ D+ L D +HRG ++ P +L P+L+E +++C I+
Sbjct: 870 LSGTKASLIDLFLQVDKLHRGLLSLSIRMDPPGNWDAIDAILLRPPKLLESLHICSIR 927
>01_05_0175 - 18936752-18937621,18938855-18941641
Length = 1218
Score = 27.9 bits (59), Expect = 6.1
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -1
Query: 420 TATSVNGVSVK-GDVINVESNPSQVLLGHGAFLGGP-LEPGDDRVLDLVQVLHTLRAVD 250
T S+N VK G + ++V+LG P L PGD R+L+ V V VD
Sbjct: 809 TVPSLNSYFVKHGSRFSSTDKNTEVILGTVVIAKNPCLHPGDVRILEAVDVPELHHLVD 867
>10_08_0621 + 19328357-19329545,19329967-19329986
Length = 402
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 187 DLTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGAMAE 345
D+T +R+I P G G I + GV +L S+V F+W G E
Sbjct: 322 DVTGSREIRMM-PFGAGRRICAGLNVGVMHLEYFVGSMVMEFEWKEVAGDEVE 373
>05_07_0228 -
28526885-28527046,28527151-28527241,28528315-28528455,
28528560-28528625,28529180-28529317,28529759-28529860,
28530156-28530236,28530314-28530383,28530598-28530674,
28531035-28531483
Length = 458
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -3
Query: 568 ARAVCSARRRYHR-PPPPDTGSRKGTRVP 485
+ + SARRR R PPPP+ G G P
Sbjct: 4 SNSTSSARRRAARAPPPPNLGDLSGVSAP 32
>03_05_1048 - 29950860-29951396,29951810-29952676
Length = 467
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 445 CLYACLLTAQPRLMEPVYLCEIQCPEVAVG 534
C C+LTA PR+M +L E ++ VG
Sbjct: 77 CGRRCVLTANPRMMVEAFLKEYLGADIVVG 106
>02_05_0263 - 27257150-27259213
Length = 687
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 495 HGFHKPGLRGQQTRVQASPSRWNDLTAT 412
HG KPG+ + V A +WN+ T T
Sbjct: 634 HGPQKPGIYALISEVYAQEGQWNEFTNT 661
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,416,934
Number of Sequences: 37544
Number of extensions: 335818
Number of successful extensions: 1440
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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