Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_J20
(419 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X57958-1|CAA41026.1| 253|Homo sapiens ribosomal protein L7 prot... 104 1e-22
AC005058-2|AAD08846.1| 247|Homo sapiens WUGSC:H_RG054D04.1 prot... 104 1e-22
X57959-1|CAA41027.1| 248|Homo sapiens ribosomal protein L7 prot... 103 2e-22
X52967-1|CAA37139.1| 248|Homo sapiens ribosomal protein L7 prot... 103 2e-22
L16558-1|AAA03081.1| 248|Homo sapiens ribosomal protein L7 prot... 103 2e-22
BC106056-1|AAI06057.1| 318|Homo sapiens RPL7 protein protein. 103 2e-22
BC087837-1|AAH87837.1| 248|Homo sapiens ribosomal protein L7 pr... 103 2e-22
BC071895-1|AAH71895.1| 248|Homo sapiens ribosomal protein L7 pr... 103 2e-22
BC071894-1|AAH71894.1| 248|Homo sapiens ribosomal protein L7 pr... 103 2e-22
BC071671-1|AAH71671.1| 248|Homo sapiens ribosomal protein L7 pr... 103 2e-22
BC009599-1|AAH09599.1| 248|Homo sapiens ribosomal protein L7 pr... 103 2e-22
BC008850-1|AAH08850.1| 248|Homo sapiens ribosomal protein L7 pr... 103 2e-22
BC006095-1|AAH06095.1| 248|Homo sapiens ribosomal protein L7 pr... 103 2e-22
CR456773-1|CAG33054.1| 248|Homo sapiens RPL7 protein. 102 6e-22
BC073890-1|AAH73890.1| 246|Homo sapiens ribosomal protein L7-li... 46 5e-05
BC058020-1|AAH58020.1| 246|Homo sapiens RPL7L1 protein protein. 46 5e-05
AL035587-3|CAI21486.1| 246|Homo sapiens ribosomal protein L7-li... 46 5e-05
BC107597-1|AAI07598.1| 417|Homo sapiens LOC130940 protein protein. 29 4.8
U55184-1|AAD00085.1| 381|Homo sapiens Golf alpha protein. 29 6.3
L10665-1|AAC37535.1| 381|Homo sapiens G-protein alpha-olf subun... 29 6.3
BC050021-1|AAH50021.1| 458|Homo sapiens guanine nucleotide bind... 29 6.3
AK090868-1|BAC03535.1| 351|Homo sapiens protein ( Homo sapiens ... 29 6.3
AF493893-1|AAM12607.1| 381|Homo sapiens guanine nucleotide bind... 29 6.3
AF217973-1|AAG17216.1| 130|Homo sapiens unknown protein. 29 6.3
BC112226-1|AAI12227.2| 637|Homo sapiens R3H domain containing 2... 29 8.4
BC104995-1|AAI04996.2| 637|Homo sapiens R3H domain containing 2... 29 8.4
BC041857-1|AAH41857.1| 681|Homo sapiens R3HDM2 protein protein. 29 8.4
AK127966-1|BAC87210.1| 180|Homo sapiens protein ( Homo sapiens ... 29 8.4
AB023219-1|BAA76846.2| 962|Homo sapiens KIAA1002 protein protein. 29 8.4
>X57958-1|CAA41026.1| 253|Homo sapiens ribosomal protein L7
protein.
Length = 253
Score = 104 bits (249), Expect = 1e-22
Identities = 53/111 (47%), Positives = 70/111 (63%)
Frame = +1
Query: 85 KGKEDSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYR 264
+ +E K++PAVPE++ + ++ +RK I+++A+ Y KEYR
Sbjct: 8 RAEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYR 67
Query: 265 IKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
R EIR+AR AR GN+YVP E KLAFVIRIRG+N VSPKVRKVLQL R
Sbjct: 68 QMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLR 118
>AC005058-2|AAD08846.1| 247|Homo sapiens WUGSC:H_RG054D04.1
protein.
Length = 247
Score = 104 bits (249), Expect = 1e-22
Identities = 53/110 (48%), Positives = 70/110 (63%)
Frame = +1
Query: 88 GKEDSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRI 267
G E+ KK+PAVPE++ + ++ +RK I+++A+ Y +EYR
Sbjct: 3 GVEEKKKVPAVPETLKKKRRNFSELKMKRLRKKFAQKMLRKARRKLIYEKAKHYHREYRQ 62
Query: 268 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
R EIR+AR AR GNY+VP E KLAFVIRIRG++ VSPKVRKVLQL R
Sbjct: 63 MYRTEIRMARMARKAGNYFVPAEPKLAFVIRIRGISGVSPKVRKVLQLLR 112
>X57959-1|CAA41027.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 103 bits (248), Expect = 2e-22
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 VKGKEDSKK-LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKE 258
++G E+ KK +PAVPE++ + ++ +RK I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 259 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
YR R EIR+AR AR GN+YVP E KLAFVIRIRG+N VSPKVRKVLQL R
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLR 113
>X52967-1|CAA37139.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 103 bits (248), Expect = 2e-22
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 VKGKEDSKK-LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKE 258
++G E+ KK +PAVPE++ + ++ +RK I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 259 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
YR R EIR+AR AR GN+YVP E KLAFVIRIRG+N VSPKVRKVLQL R
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLR 113
>L16558-1|AAA03081.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 103 bits (248), Expect = 2e-22
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 VKGKEDSKK-LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKE 258
++G E+ KK +PAVPE++ + ++ +RK I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 259 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
YR R EIR+AR AR GN+YVP E KLAFVIRIRG+N VSPKVRKVLQL R
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLR 113
>BC106056-1|AAI06057.1| 318|Homo sapiens RPL7 protein protein.
Length = 318
Score = 103 bits (248), Expect = 2e-22
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 VKGKEDSKK-LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKE 258
++G E+ KK +PAVPE++ + ++ +RK I+++A+ Y KE
Sbjct: 71 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 130
Query: 259 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
YR R EIR+AR AR GN+YVP E KLAFVIRIRG+N VSPKVRKVLQL R
Sbjct: 131 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLR 183
>BC087837-1|AAH87837.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 103 bits (248), Expect = 2e-22
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 VKGKEDSKK-LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKE 258
++G E+ KK +PAVPE++ + ++ +RK I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 259 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
YR R EIR+AR AR GN+YVP E KLAFVIRIRG+N VSPKVRKVLQL R
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLR 113
>BC071895-1|AAH71895.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 103 bits (248), Expect = 2e-22
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 VKGKEDSKK-LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKE 258
++G E+ KK +PAVPE++ + ++ +RK I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 259 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
YR R EIR+AR AR GN+YVP E KLAFVIRIRG+N VSPKVRKVLQL R
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLR 113
>BC071894-1|AAH71894.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 103 bits (248), Expect = 2e-22
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 VKGKEDSKK-LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKE 258
++G E+ KK +PAVPE++ + ++ +RK I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 259 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
YR R EIR+AR AR GN+YVP E KLAFVIRIRG+N VSPKVRKVLQL R
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLR 113
>BC071671-1|AAH71671.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 103 bits (248), Expect = 2e-22
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 VKGKEDSKK-LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKE 258
++G E+ KK +PAVPE++ + ++ +RK I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 259 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
YR R EIR+AR AR GN+YVP E KLAFVIRIRG+N VSPKVRKVLQL R
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLR 113
>BC009599-1|AAH09599.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 103 bits (248), Expect = 2e-22
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 VKGKEDSKK-LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKE 258
++G E+ KK +PAVPE++ + ++ +RK I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 259 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
YR R EIR+AR AR GN+YVP E KLAFVIRIRG+N VSPKVRKVLQL R
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLR 113
>BC008850-1|AAH08850.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 103 bits (248), Expect = 2e-22
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 VKGKEDSKK-LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKE 258
++G E+ KK +PAVPE++ + ++ +RK I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 259 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
YR R EIR+AR AR GN+YVP E KLAFVIRIRG+N VSPKVRKVLQL R
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLR 113
>BC006095-1|AAH06095.1| 248|Homo sapiens ribosomal protein L7
protein.
Length = 248
Score = 103 bits (248), Expect = 2e-22
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 VKGKEDSKK-LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKE 258
++G E+ KK +PAVPE++ + ++ +RK I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKE 60
Query: 259 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
YR R EIR+AR AR GN+YVP E KLAFVIRIRG+N VSPKVRKVLQL R
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLR 113
>CR456773-1|CAG33054.1| 248|Homo sapiens RPL7 protein.
Length = 248
Score = 102 bits (244), Expect = 6e-22
Identities = 54/113 (47%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 VKGKEDSKK-LPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKE 258
++G E+ KK +PAVPE++ + ++ +R+ I+++A+ Y KE
Sbjct: 1 MEGVEEKKKEVPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRELIYEKAKHYHKE 60
Query: 259 YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
YR R EIR+AR AR GN+YVP E KLAFVIRIRG+N VSPKVRKVLQL R
Sbjct: 61 YRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLR 113
>BC073890-1|AAH73890.1| 246|Homo sapiens ribosomal protein L7-like
1 protein.
Length = 246
Score = 46.0 bits (104), Expect = 5e-05
Identities = 27/109 (24%), Positives = 52/109 (47%)
Frame = +1
Query: 91 KEDSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRIK 270
+++ +K+P VPE++ + L + K + FKR E ++ + +
Sbjct: 3 EQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQ 62
Query: 271 ERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
+RD++RL R +P + LAFV+RI ++ VS V++ + R
Sbjct: 63 KRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLR 111
>BC058020-1|AAH58020.1| 246|Homo sapiens RPL7L1 protein protein.
Length = 246
Score = 46.0 bits (104), Expect = 5e-05
Identities = 27/109 (24%), Positives = 52/109 (47%)
Frame = +1
Query: 91 KEDSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRIK 270
+++ +K+P VPE++ + L + K + FKR E ++ + +
Sbjct: 3 EQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQ 62
Query: 271 ERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
+RD++RL R +P + LAFV+RI ++ VS V++ + R
Sbjct: 63 KRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLR 111
>AL035587-3|CAI21486.1| 246|Homo sapiens ribosomal protein L7-like
1 protein.
Length = 246
Score = 46.0 bits (104), Expect = 5e-05
Identities = 27/109 (24%), Positives = 52/109 (47%)
Frame = +1
Query: 91 KEDSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRIK 270
+++ +K+P VPE++ + L + K + FKR E ++ + +
Sbjct: 3 EQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQ 62
Query: 271 ERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFR 417
+RD++RL R +P + LAFV+RI ++ VS V++ + R
Sbjct: 63 KRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLR 111
>BC107597-1|AAI07598.1| 417|Homo sapiens LOC130940 protein protein.
Length = 417
Score = 29.5 bits (63), Expect = 4.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 15 WSFIPQHDGCDYRKEGCGREKTC 83
W F+P+ + RK CGR + C
Sbjct: 386 WKFLPEEEKRKRRKRNCGRRRNC 408
>U55184-1|AAD00085.1| 381|Homo sapiens Golf alpha protein.
Length = 381
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 230 LREPNNMSKNTASRSVMKSDWQDR-LVTVAIIMCPVKLN*HLSSVFVVSTK---YHPRYA 397
+RE NN ++ S + +S W +R L T++II+ K + V +K Y P YA
Sbjct: 244 IREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYA 303
Query: 398 RY 403
Y
Sbjct: 304 NY 305
>L10665-1|AAC37535.1| 381|Homo sapiens G-protein alpha-olf subunit
protein.
Length = 381
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 230 LREPNNMSKNTASRSVMKSDWQDR-LVTVAIIMCPVKLN*HLSSVFVVSTK---YHPRYA 397
+RE NN ++ S + +S W +R L T++II+ K + V +K Y P YA
Sbjct: 244 IREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYA 303
Query: 398 RY 403
Y
Sbjct: 304 NY 305
>BC050021-1|AAH50021.1| 458|Homo sapiens guanine nucleotide binding
protein (G protein), alpha activating activity polyp
protein.
Length = 458
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 230 LREPNNMSKNTASRSVMKSDWQDR-LVTVAIIMCPVKLN*HLSSVFVVSTK---YHPRYA 397
+RE NN ++ S + +S W +R L T++II+ K + V +K Y P YA
Sbjct: 321 IREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYA 380
Query: 398 RY 403
Y
Sbjct: 381 NY 382
>AK090868-1|BAC03535.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ33549 fis, clone BRAMY2009013, highly similar to
GUANINE NUCLEOTIDE-BINDING PROTEIN G. ).
Length = 351
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 230 LREPNNMSKNTASRSVMKSDWQDR-LVTVAIIMCPVKLN*HLSSVFVVSTK---YHPRYA 397
+RE NN ++ S + +S W +R L T++II+ K + V +K Y P YA
Sbjct: 214 IREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYA 273
Query: 398 RY 403
Y
Sbjct: 274 NY 275
>AF493893-1|AAM12607.1| 381|Homo sapiens guanine nucleotide binding
protein alpha olf protein.
Length = 381
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 230 LREPNNMSKNTASRSVMKSDWQDR-LVTVAIIMCPVKLN*HLSSVFVVSTK---YHPRYA 397
+RE NN ++ S + +S W +R L T++II+ K + V +K Y P YA
Sbjct: 244 IREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYA 303
Query: 398 RY 403
Y
Sbjct: 304 NY 305
>AF217973-1|AAG17216.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -3
Query: 303 SLSCQSDFITLLDAVFFDILFGSLKDFFPLLNGSGT-PLECDLKTASSECLP 151
S+ + DF+ L +FF F ++ P L SGT C+L S P
Sbjct: 11 SVDSRGDFLVFLCPIFFSFSFSEVESLSPRLECSGTISAHCNLCLLGSSYSP 62
>BC112226-1|AAI12227.2| 637|Homo sapiens R3H domain containing 2
protein.
Length = 637
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 140 TVKGGRHSELAVFRSHSRGVPLPLRRGKKSLREPNNMSK 256
T + GRHS+LA + P PL SLR N++S+
Sbjct: 578 TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSR 616
>BC104995-1|AAI04996.2| 637|Homo sapiens R3H domain containing 2
protein.
Length = 637
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 140 TVKGGRHSELAVFRSHSRGVPLPLRRGKKSLREPNNMSK 256
T + GRHS+LA + P PL SLR N++S+
Sbjct: 578 TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSR 616
>BC041857-1|AAH41857.1| 681|Homo sapiens R3HDM2 protein protein.
Length = 681
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 140 TVKGGRHSELAVFRSHSRGVPLPLRRGKKSLREPNNMSK 256
T + GRHS+LA + P PL SLR N++S+
Sbjct: 622 TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSR 660
>AK127966-1|BAC87210.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ46080 fis, clone TESTI2004971. ).
Length = 180
Score = 28.7 bits (61), Expect = 8.4
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = +2
Query: 146 KGGRHSELAVFRSHSRGVPLPLRRGKKSLREPNNMSKNTASRSV 277
KGG+ L+V SRGVP PLR G K E ASR +
Sbjct: 60 KGGKRGSLSV--PASRGVPPPLRWGCKEPGEERGRFAVPASRGL 101
>AB023219-1|BAA76846.2| 962|Homo sapiens KIAA1002 protein protein.
Length = 962
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 140 TVKGGRHSELAVFRSHSRGVPLPLRRGKKSLREPNNMSK 256
T + GRHS+LA + P PL SLR N++S+
Sbjct: 903 TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSR 941
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,026,130
Number of Sequences: 237096
Number of extensions: 1213702
Number of successful extensions: 4485
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4471
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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