Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_J14
(489 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 96 1e-20
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 87 9e-18
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 75 2e-14
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 69 2e-12
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 65 3e-11
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 63 1e-10
08_01_0397 - 3509186-3510291,3510322-3512335 60 7e-10
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 60 9e-10
06_03_1255 + 28780181-28781172,28782065-28782932 47 7e-06
02_01_0381 - 2764331-2764342,2768966-2769907 46 1e-05
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 45 3e-05
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 45 4e-05
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 43 2e-04
03_05_0865 - 28365430-28367640 42 4e-04
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 37 0.008
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 36 0.023
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 33 0.093
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 31 0.38
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 29 2.0
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 29 2.0
01_07_0192 - 41888998-41890632 29 2.6
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 28 3.5
10_01_0003 + 46158-46428,46588-46706,46819-46928,48977-49415,495... 27 8.1
06_03_1265 + 28847782-28849803 27 8.1
05_04_0123 + 18210069-18213737 27 8.1
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 27 8.1
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 27 8.1
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 96.3 bits (229), Expect = 1e-20
Identities = 42/86 (48%), Positives = 57/86 (66%)
Frame = +2
Query: 230 PNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPD 409
P D SL PF K+FY +V S +V YR + ++TV G +VP P+ +F+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 410 YVCQAIKSMGYKDPTPIQAQGWPIAM 487
Y QAI G+ +PTPIQ+QGWP+A+
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMAL 191
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 86.6 bits (205), Expect = 9e-18
Identities = 37/79 (46%), Positives = 50/79 (63%)
Frame = +2
Query: 251 LQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIK 430
L F K+FY SV + EVE YR + E+TV G +VP P+ F + FP+YV Q I
Sbjct: 48 LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEIT 107
Query: 431 SMGYKDPTPIQAQGWPIAM 487
G+ +PTPIQ+QGWP+A+
Sbjct: 108 KAGFVEPTPIQSQGWPMAL 126
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 75.4 bits (177), Expect = 2e-14
Identities = 35/82 (42%), Positives = 45/82 (54%)
Frame = +2
Query: 242 SLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQ 421
++ +PFNKDFY SV S EV DY + VSG +VP PI+ F + FP +
Sbjct: 173 TIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMN 232
Query: 422 AIKSMGYKDPTPIQAQGWPIAM 487
AI GY+ PT IQ Q PI +
Sbjct: 233 AIAKQGYEKPTTIQCQALPIVL 254
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 68.9 bits (161), Expect = 2e-12
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +2
Query: 320 EDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAM 487
E YR++HE+TV G VP PI FE FP + + I+ G+ PTPIQAQ WPIA+
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIAL 185
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 64.9 bits (151), Expect = 3e-11
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = +2
Query: 320 EDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAM 487
E YR KHE+T+ G E P P F+ FP + + ++ G+ PTPIQAQ WPIA+
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIAL 215
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 62.9 bits (146), Expect = 1e-10
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2
Query: 326 YRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAM 487
YR HEVT G VP P FE FP + Q I + G+ +PTPIQAQ WP+A+
Sbjct: 586 YRQHHEVTAVGENVPPPFMTFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVAL 639
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 60.5 bits (140), Expect = 7e-10
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = +2
Query: 245 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQA 424
+ QPF K+FY K + + EV YR + E+ V G +VP PI+ + ++ +
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDT 438
Query: 425 IKSMGYKDPTPIQAQGWPIAM 487
IK +G++ P IQAQ PI M
Sbjct: 439 IKKLGFEKPMSIQAQALPIIM 459
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 60.1 bits (139), Expect = 9e-10
Identities = 29/81 (35%), Positives = 43/81 (53%)
Frame = +2
Query: 245 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQA 424
+ QPF K+ Y K + + EV YR E+ V G +VP PI+ + ++ +
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDT 299
Query: 425 IKSMGYKDPTPIQAQGWPIAM 487
IK +G++ P PIQAQ PI M
Sbjct: 300 IKKLGFEKPMPIQAQALPIIM 320
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 47.2 bits (107), Expect = 7e-06
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 296 LDRSPYEVED-YRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQG 472
L R P D R + V G +VP P F + P+ + +A++ G + PTPIQ QG
Sbjct: 144 LRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQVQG 203
Query: 473 WPIAM 487
P+A+
Sbjct: 204 LPVAL 208
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 314 EVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAM 487
+ ++ R K + V G +VP P F + P+ + + ++ G PTPIQ QG P+ +
Sbjct: 160 KADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVL 217
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +2
Query: 329 RNKHEVTVSGVEVPNPIEHFEEA----NFPDYVCQAIKSMGYKDPTPIQAQGWPIAM 487
R K ++ +SG VP P+E+FEE Y+ + +G+++PTPIQ Q PI +
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILL 181
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 44.8 bits (101), Expect = 4e-05
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 344 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAM 487
V VSG +VP P + FE A + V + + GY+ PTP+Q PIA+
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIAL 119
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +2
Query: 314 EVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWP 478
++ R+K ++ V G +VP+PI F + P+ + +++ GY PTP+Q Q P
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIP 214
>03_05_0865 - 28365430-28367640
Length = 736
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/67 (25%), Positives = 36/67 (53%)
Frame = +2
Query: 287 KSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQA 466
KS+ + + + +R ++ G +VP P+ + E+ + +A++ GYK+P+PIQ
Sbjct: 284 KSLDEMTERDWRIFREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQM 343
Query: 467 QGWPIAM 487
P+ +
Sbjct: 344 ASIPLGL 350
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 37.1 bits (82), Expect = 0.008
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Frame = +2
Query: 227 RPNWDSLSLQP---FNKDFYNPHKSVLDRSPYEVE-DYRNKHEVTVSGVEVPNPIEHFEE 394
RP WD +P N + + D + + D V SG +VP P+ F E
Sbjct: 182 RPGWDRRDREPNPFANSEAEEATEVDFDTANTGINFDAYEDIPVETSGHDVPPPVNTFAE 241
Query: 395 ANFPDYVCQAIKSMGYKDPTPIQAQGWPIAM 487
+ D + + I+ Y PTP+Q PI++
Sbjct: 242 IDLGDALNENIRRCKYVKPTPVQRYAIPISI 272
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 35.5 bits (78), Expect = 0.023
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = +2
Query: 218 NMRRPNWDSLSLQPFNKDFYNPHKSVLD----RSPYEVEDYRNKHEVTVSGVEVPNPIEH 385
N R WD +P F N + +D + E Y + V SG +VP P
Sbjct: 268 NSRPGGWDRRDREP--DPFANSEAAEVDFEGENTGINFEAYEDI-PVETSGHDVPPPANT 324
Query: 386 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAM 487
F E + D + + I+ Y PTP+Q PI++
Sbjct: 325 FAEIDLGDALNENIRRCKYVKPTPVQRYAIPISI 358
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 33.5 bits (73), Expect = 0.093
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 344 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAM 487
V SG EVP P+ F E + + I+ Y PTP+Q PI++
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISL 190
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 31.5 bits (68), Expect = 0.38
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 386 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAM 487
F E N + +A +++GY+ PTPIQA P+A+
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLAL 229
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 386 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAM 487
FE + V + ++ GY+ PTPIQ + P+ +
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLIL 61
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 374 PIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWP 478
P+ F P V K G++ P+PIQA WP
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWP 124
>01_07_0192 - 41888998-41890632
Length = 544
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 353 SGVEVPNP--IEHFEEANFPDYVCQAIKSMGYKD 448
SGV NP ++HF A+FP+YV A ++ ++D
Sbjct: 84 SGVATANPAVVDHFLRASFPNYVKGARFAVPFED 117
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 422 AIKSMGYKDPTPIQAQGWPIA 484
A++ +G+K+PTPIQ +P A
Sbjct: 156 AVRRLGFKEPTPIQKACFPAA 176
>10_01_0003 +
46158-46428,46588-46706,46819-46928,48977-49415,
49511-49633,49805-50106,50143-50350,50729-51448
Length = 763
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 278 NPHKSVLDRS--PYEVEDYRNKHEVTVSGVEVPNPIEHFEEAN 400
N +S+LD YE + +++E+T+S PN E +AN
Sbjct: 234 NNAESILDEGYISYEAQTPADRYEITISDNGQPNDYESLVDAN 276
>06_03_1265 + 28847782-28849803
Length = 673
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 192 PRKISLVGKICDALIGIRCRSNHLTKIFIILINQSW 299
PR +S V K C+ L+G RS LT+ +++I++SW
Sbjct: 414 PRIVSFVAKYCNQLLGDPYRS-VLTQ--VLVIHRSW 446
>05_04_0123 + 18210069-18213737
Length = 1222
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 369 LILLNILK-RQTFQIMCVKQ*KVWVTKILPLYRLKDGQSL 485
+ L NI+K + T I C+K VW L + RLKD + L
Sbjct: 778 ITLRNIVKLKVTDSINCMKLPSVWKLPFLEVLRLKDMKKL 817
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 434 MGYKDPTPIQAQGWPIAM 487
MG++ PT IQAQ P+AM
Sbjct: 42 MGFQAPTRIQAQAIPVAM 59
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 386 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAM 487
F E + A +MG+K+PT IQA+ P A+
Sbjct: 43 FAELGVVPELVAACDAMGWKEPTRIQAEAIPHAL 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,404,714
Number of Sequences: 37544
Number of extensions: 191116
Number of successful extensions: 437
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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