Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_J11
(435 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein pro... 157 2e-38
BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 p... 157 2e-38
BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 p... 157 2e-38
BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 p... 157 2e-38
BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 p... 157 2e-38
AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 p... 157 2e-38
AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subun... 31 1.7
CR456387-1|CAG30273.1| 1171|Homo sapiens bA494O16.1 protein. 30 3.0
BC117670-1|AAI17671.1| 1171|Homo sapiens zinc finger, BED-type c... 30 3.0
AL117328-2|CAB62924.1| 1171|Homo sapiens protein ( Human DNA seq... 30 3.0
AB014537-1|BAA31612.2| 1175|Homo sapiens KIAA0637 protein protein. 30 3.0
AB007155-1|BAA28593.1| 18|Homo sapiens ribosomal protein S19 p... 29 6.9
AL442071-4|CAH73671.1| 5938|Homo sapiens microtubule-actin cross... 29 9.1
AL442071-2|CAH73669.1| 4433|Homo sapiens microtubule-actin cross... 29 9.1
AL442071-1|CAH73668.1| 5430|Homo sapiens microtubule-actin cross... 29 9.1
AL365277-12|CAI16422.1| 5938|Homo sapiens microtubule-actin cros... 29 9.1
AL365277-10|CAI16420.1| 4433|Homo sapiens microtubule-actin cros... 29 9.1
AL365277-7|CAI16417.1| 5430|Homo sapiens microtubule-actin cross... 29 9.1
AL355477-1|CAH70156.1| 5430|Homo sapiens microtubule-actin cross... 29 9.1
AL137853-3|CAI21816.1| 5938|Homo sapiens microtubule-actin cross... 29 9.1
AL137853-2|CAI21815.1| 4433|Homo sapiens microtubule-actin cross... 29 9.1
AL137853-1|CAI21814.1| 5430|Homo sapiens microtubule-actin cross... 29 9.1
AF325341-2|AAL38997.1| 5314|Homo sapiens macrophin 1 isoform 4 p... 29 9.1
AF325341-1|AAL39000.1| 4631|Homo sapiens macrophin 1 isoform 2 p... 29 9.1
AF317696-1|AAL09459.1| 5938|Homo sapiens macrophin 1 isoform 4 p... 29 9.1
AF141968-1|AAF06360.1| 5373|Homo sapiens trabeculin-alpha protein. 29 9.1
AB033077-1|BAA86565.1| 1483|Homo sapiens KIAA1251 protein protein. 29 9.1
AB029290-1|BAA83821.1| 5430|Homo sapiens actin binding protein A... 29 9.1
AB007934-1|BAA32310.3| 4433|Homo sapiens KIAA0465 protein protein. 29 9.1
>M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein
protein.
Length = 145
Score = 157 bits (381), Expect = 2e-38
Identities = 72/110 (65%), Positives = 88/110 (80%)
Frame = +3
Query: 33 GKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRN 212
GK+KVP+ +D VK A+ KELAPYD +WFY R A+ RH+Y+R GV ++TKI+GGR+RN
Sbjct: 26 GKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRN 85
Query: 213 GVTPSHFCRSSGSIARKALQALEALKLVEKVQDGGRILTTQGRRDLDRIA 362
GV PSHF R S S+AR+ LQALE LK+VEK QDGGR LT QG+RDLDRIA
Sbjct: 86 GVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIA 135
>BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 157 bits (381), Expect = 2e-38
Identities = 72/110 (65%), Positives = 88/110 (80%)
Frame = +3
Query: 33 GKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRN 212
GK+KVP+ +D VK A+ KELAPYD +WFY R A+ RH+Y+R GV ++TKI+GGR+RN
Sbjct: 26 GKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRN 85
Query: 213 GVTPSHFCRSSGSIARKALQALEALKLVEKVQDGGRILTTQGRRDLDRIA 362
GV PSHF R S S+AR+ LQALE LK+VEK QDGGR LT QG+RDLDRIA
Sbjct: 86 GVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIA 135
>BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19
protein.
Length = 157
Score = 157 bits (381), Expect = 2e-38
Identities = 72/110 (65%), Positives = 88/110 (80%)
Frame = +3
Query: 33 GKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRN 212
GK+KVP+ +D VK A+ KELAPYD +WFY R A+ RH+Y+R GV ++TKI+GGR+RN
Sbjct: 38 GKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRN 97
Query: 213 GVTPSHFCRSSGSIARKALQALEALKLVEKVQDGGRILTTQGRRDLDRIA 362
GV PSHF R S S+AR+ LQALE LK+VEK QDGGR LT QG+RDLDRIA
Sbjct: 98 GVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIA 147
>BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 157 bits (381), Expect = 2e-38
Identities = 72/110 (65%), Positives = 88/110 (80%)
Frame = +3
Query: 33 GKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRN 212
GK+KVP+ +D VK A+ KELAPYD +WFY R A+ RH+Y+R GV ++TKI+GGR+RN
Sbjct: 26 GKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRN 85
Query: 213 GVTPSHFCRSSGSIARKALQALEALKLVEKVQDGGRILTTQGRRDLDRIA 362
GV PSHF R S S+AR+ LQALE LK+VEK QDGGR LT QG+RDLDRIA
Sbjct: 86 GVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIA 135
>BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 157 bits (381), Expect = 2e-38
Identities = 72/110 (65%), Positives = 88/110 (80%)
Frame = +3
Query: 33 GKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRN 212
GK+KVP+ +D VK A+ KELAPYD +WFY R A+ RH+Y+R GV ++TKI+GGR+RN
Sbjct: 26 GKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRN 85
Query: 213 GVTPSHFCRSSGSIARKALQALEALKLVEKVQDGGRILTTQGRRDLDRIA 362
GV PSHF R S S+AR+ LQALE LK+VEK QDGGR LT QG+RDLDRIA
Sbjct: 86 GVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIA 135
>AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 157 bits (381), Expect = 2e-38
Identities = 72/110 (65%), Positives = 88/110 (80%)
Frame = +3
Query: 33 GKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRN 212
GK+KVP+ +D VK A+ KELAPYD +WFY R A+ RH+Y+R GV ++TKI+GGR+RN
Sbjct: 26 GKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRN 85
Query: 213 GVTPSHFCRSSGSIARKALQALEALKLVEKVQDGGRILTTQGRRDLDRIA 362
GV PSHF R S S+AR+ LQALE LK+VEK QDGGR LT QG+RDLDRIA
Sbjct: 86 GVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIA 135
>AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subunit
variant protein.
Length = 249
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +3
Query: 99 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 269
Y P R +LR P G + T + GGR+ G S CR G R+AL
Sbjct: 179 YTPTISRERAVELLRKCLEEGPGGAGSSTALGGGRRSVGQDRSSSCRRKGRGRRRAL 235
>CR456387-1|CAG30273.1| 1171|Homo sapiens bA494O16.1 protein.
Length = 1171
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 271 WRALRAILPDDLQK*EGVTPLRLRPPKILVTVLTPTGE 158
WRA RAI+ + G+ PL PP +L ++L P GE
Sbjct: 332 WRAHRAIVLQE-NGGTGIPPLYSTPPTLLPSLLPPEGE 368
>BC117670-1|AAI17671.1| 1171|Homo sapiens zinc finger, BED-type
containing 4 protein.
Length = 1171
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 271 WRALRAILPDDLQK*EGVTPLRLRPPKILVTVLTPTGE 158
WRA RAI+ + G+ PL PP +L ++L P GE
Sbjct: 332 WRAHRAIVLQE-NGGTGIPPLYSTPPTLLPSLLPPEGE 368
>AL117328-2|CAB62924.1| 1171|Homo sapiens protein ( Human DNA
sequence from clone RP11-494O16 on chromosome 22
Contains the ZBED4 gene for zinc finger, BED-type
containing 4, the gene for ).
Length = 1171
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 271 WRALRAILPDDLQK*EGVTPLRLRPPKILVTVLTPTGE 158
WRA RAI+ + G+ PL PP +L ++L P GE
Sbjct: 332 WRAHRAIVLQE-NGGTGIPPLYSTPPTLLPSLLPPEGE 368
>AB014537-1|BAA31612.2| 1175|Homo sapiens KIAA0637 protein protein.
Length = 1175
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 271 WRALRAILPDDLQK*EGVTPLRLRPPKILVTVLTPTGE 158
WRA RAI+ + G+ PL PP +L ++L P GE
Sbjct: 336 WRAHRAIVLQE-NGGTGIPPLYSTPPTLLPSLLPPEGE 372
>AB007155-1|BAA28593.1| 18|Homo sapiens ribosomal protein S19
protein.
Length = 18
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3
Query: 315 GRILTTQGRRDLDRIA 362
GR LT QG+RDLDRIA
Sbjct: 1 GRKLTPQGQRDLDRIA 16
>AL442071-4|CAH73671.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 2274 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 2306
>AL442071-2|CAH73669.1| 4433|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 4433
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 905 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 937
>AL442071-1|CAH73668.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 1772 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 1804
>AL365277-12|CAI16422.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 2274 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 2306
>AL365277-10|CAI16420.1| 4433|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 4433
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 905 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 937
>AL365277-7|CAI16417.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 1772 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 1804
>AL355477-1|CAH70156.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 1772 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 1804
>AL137853-3|CAI21816.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 2274 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 2306
>AL137853-2|CAI21815.1| 4433|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 4433
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 905 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 937
>AL137853-1|CAI21814.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 1772 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 1804
>AF325341-2|AAL38997.1| 5314|Homo sapiens macrophin 1 isoform 4
protein.
Length = 5314
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 2274 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 2306
>AF325341-1|AAL39000.1| 4631|Homo sapiens macrophin 1 isoform 2
protein.
Length = 4631
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 1591 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 1623
>AF317696-1|AAL09459.1| 5938|Homo sapiens macrophin 1 isoform 4
protein.
Length = 5938
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 2274 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 2306
>AF141968-1|AAF06360.1| 5373|Homo sapiens trabeculin-alpha protein.
Length = 5373
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 1737 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 1769
>AB033077-1|BAA86565.1| 1483|Homo sapiens KIAA1251 protein protein.
Length = 1483
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 905 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 937
>AB029290-1|BAA83821.1| 5430|Homo sapiens actin binding protein ABP620
protein.
Length = 5430
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 1772 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 1804
>AB007934-1|BAA32310.3| 4433|Homo sapiens KIAA0465 protein protein.
Length = 4433
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 324 EYGRHLEPSLPTSTLQELGELYEQYCQMICRSE 226
++G +L P Q+LGEL EQY + +SE
Sbjct: 905 QHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSE 937
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,423,950
Number of Sequences: 237096
Number of extensions: 1290226
Number of successful extensions: 2859
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2859
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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