Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_J10
(368 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65533-1|AAC50771.1| 1118|Homo sapiens regulator of nonsense tra... 32 0.50
U59323-1|AAC51140.1| 1118|Homo sapiens homolog of yeast UPF1 pro... 32 0.50
D86988-1|BAA19664.2| 1151|Homo sapiens KIAA0221 protein. 32 0.50
BC039817-1|AAH39817.1| 1118|Homo sapiens UPF1 regulator of nonse... 32 0.50
AF074016-1|AAC26788.1| 1118|Homo sapiens nonsense-mediated mRNA ... 32 0.50
AC003972-1|AAB94785.1| 1118|Homo sapiens pNORF1 protein. 32 0.50
CR456804-1|CAG33085.1| 381|Homo sapiens RNF13 protein. 29 3.5
BC009803-1|AAH09803.1| 381|Homo sapiens ring finger protein 13 ... 29 3.5
BC009781-1|AAH09781.1| 381|Homo sapiens ring finger protein 13 ... 29 3.5
AF070558-1|AAC28641.1| 381|Homo sapiens RING zinc finger protei... 29 3.5
AF037204-1|AAC03769.1| 381|Homo sapiens RING zinc finger protei... 29 3.5
BC017878-1|AAH17878.1| 291|Homo sapiens RNF13 protein protein. 29 4.7
BX005460-6|CAM26152.1| 922|Homo sapiens euchromatic histone-lys... 29 6.2
BX005460-5|CAM26151.1| 888|Homo sapiens euchromatic histone-lys... 29 6.2
BC020970-1|AAH20970.2| 1198|Homo sapiens EHMT2 protein protein. 29 6.2
BC018718-1|AAH18718.1| 1001|Homo sapiens EHMT2 protein protein. 29 6.2
BC009351-1|AAH09351.1| 1209|Homo sapiens EHMT2 protein protein. 29 6.2
BC002686-1|AAH02686.2| 1043|Homo sapiens EHMT2 protein protein. 29 6.2
BA000025-4|BAB63295.1| 1001|Homo sapiens G9A protein. 29 6.2
AL844853-4|CAI41853.1| 1210|Homo sapiens HLA-B associated transc... 29 6.2
AL844853-3|CAI41852.1| 1176|Homo sapiens HLA-B associated transc... 29 6.2
AL671762-16|CAI18226.2| 1176|Homo sapiens euchromatic histone-ly... 29 6.2
AL671762-15|CAI18224.2| 1210|Homo sapiens euchromatic histone-ly... 29 6.2
AL671762-14|CAM25534.1| 1267|Homo sapiens euchromatic histone-ly... 29 6.2
AL671762-13|CAM25533.1| 1233|Homo sapiens euchromatic histone-ly... 29 6.2
AL662834-27|CAI17748.1| 1210|Homo sapiens euchromatic histone-ly... 29 6.2
AL662834-26|CAI17747.2| 1176|Homo sapiens euchromatic histone-ly... 29 6.2
AL662834-25|CAM24993.1| 1267|Homo sapiens euchromatic histone-ly... 29 6.2
AL662834-24|CAM24992.1| 1233|Homo sapiens euchromatic histone-ly... 29 6.2
AJ315532-1|CAC86666.1| 1210|Homo sapiens NG36/G9a protein. 29 6.2
AF134726-3|AAD21812.1| 1001|Homo sapiens G9A protein. 29 6.2
AB209433-1|BAD92670.1| 1031|Homo sapiens HLA-B associated transc... 29 6.2
>U65533-1|AAC50771.1| 1118|Homo sapiens regulator of nonsense
transcript stability protein.
Length = 1118
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Frame = -2
Query: 187 HACSY---HFGLCVYIGHVSYPEICETTIKTTKNHHINH--------ITSHRNSFIGESA 41
HACSY H CV + S C T+ +H +NH +T H++ +GE+
Sbjct: 121 HACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETV 180
Query: 40 IRCW 29
+ C+
Sbjct: 181 LECY 184
>U59323-1|AAC51140.1| 1118|Homo sapiens homolog of yeast UPF1
protein.
Length = 1118
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Frame = -2
Query: 187 HACSY---HFGLCVYIGHVSYPEICETTIKTTKNHHINH--------ITSHRNSFIGESA 41
HACSY H CV + S C T+ +H +NH +T H++ +GE+
Sbjct: 121 HACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETV 180
Query: 40 IRCW 29
+ C+
Sbjct: 181 LECY 184
>D86988-1|BAA19664.2| 1151|Homo sapiens KIAA0221 protein.
Length = 1151
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Frame = -2
Query: 187 HACSY---HFGLCVYIGHVSYPEICETTIKTTKNHHINH--------ITSHRNSFIGESA 41
HACSY H CV + S C T+ +H +NH +T H++ +GE+
Sbjct: 143 HACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETV 202
Query: 40 IRCW 29
+ C+
Sbjct: 203 LECY 206
>BC039817-1|AAH39817.1| 1118|Homo sapiens UPF1 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1118
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Frame = -2
Query: 187 HACSY---HFGLCVYIGHVSYPEICETTIKTTKNHHINH--------ITSHRNSFIGESA 41
HACSY H CV + S C T+ +H +NH +T H++ +GE+
Sbjct: 121 HACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETV 180
Query: 40 IRCW 29
+ C+
Sbjct: 181 LECY 184
>AF074016-1|AAC26788.1| 1118|Homo sapiens nonsense-mediated mRNA
decay trans-acting factor protein.
Length = 1118
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Frame = -2
Query: 187 HACSY---HFGLCVYIGHVSYPEICETTIKTTKNHHINH--------ITSHRNSFIGESA 41
HACSY H CV + S C T+ +H +NH +T H++ +GE+
Sbjct: 121 HACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETV 180
Query: 40 IRCW 29
+ C+
Sbjct: 181 LECY 184
>AC003972-1|AAB94785.1| 1118|Homo sapiens pNORF1 protein.
Length = 1118
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Frame = -2
Query: 187 HACSY---HFGLCVYIGHVSYPEICETTIKTTKNHHINH--------ITSHRNSFIGESA 41
HACSY H CV + S C T+ +H +NH +T H++ +GE+
Sbjct: 121 HACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETV 180
Query: 40 IRCW 29
+ C+
Sbjct: 181 LECY 184
>CR456804-1|CAG33085.1| 381|Homo sapiens RNF13 protein.
Length = 381
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +2
Query: 257 LDCSHIATCKC--KW-SSGKKTCHVCLR*PAPA 346
L CSH CKC W + KKTC VC + P+
Sbjct: 256 LPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 288
>BC009803-1|AAH09803.1| 381|Homo sapiens ring finger protein 13
protein.
Length = 381
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +2
Query: 257 LDCSHIATCKC--KW-SSGKKTCHVCLR*PAPA 346
L CSH CKC W + KKTC VC + P+
Sbjct: 256 LPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 288
>BC009781-1|AAH09781.1| 381|Homo sapiens ring finger protein 13
protein.
Length = 381
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +2
Query: 257 LDCSHIATCKC--KW-SSGKKTCHVCLR*PAPA 346
L CSH CKC W + KKTC VC + P+
Sbjct: 256 LPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 288
>AF070558-1|AAC28641.1| 381|Homo sapiens RING zinc finger protein
RZF protein.
Length = 381
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +2
Query: 257 LDCSHIATCKC--KW-SSGKKTCHVCLR*PAPA 346
L CSH CKC W + KKTC VC + P+
Sbjct: 256 LPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 288
>AF037204-1|AAC03769.1| 381|Homo sapiens RING zinc finger protein
protein.
Length = 381
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +2
Query: 257 LDCSHIATCKC--KW-SSGKKTCHVCLR*PAPA 346
L CSH CKC W + KKTC VC + P+
Sbjct: 256 LPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 288
>BC017878-1|AAH17878.1| 291|Homo sapiens RNF13 protein protein.
Length = 291
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = +2
Query: 257 LDCSHIATCKC--KW-SSGKKTCHVC 325
L CSH CKC W + KKTC VC
Sbjct: 256 LPCSHAYHCKCVDPWLTKTKKTCPVC 281
>BX005460-6|CAM26152.1| 922|Homo sapiens euchromatic histone-lysine
N-methyltransferase 2 protein.
Length = 922
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 667 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 708
>BX005460-5|CAM26151.1| 888|Homo sapiens euchromatic histone-lysine
N-methyltransferase 2 protein.
Length = 888
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 633 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 674
>BC020970-1|AAH20970.2| 1198|Homo sapiens EHMT2 protein protein.
Length = 1198
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 943 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 984
>BC018718-1|AAH18718.1| 1001|Homo sapiens EHMT2 protein protein.
Length = 1001
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 746 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 787
>BC009351-1|AAH09351.1| 1209|Homo sapiens EHMT2 protein protein.
Length = 1209
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 954 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 995
>BC002686-1|AAH02686.2| 1043|Homo sapiens EHMT2 protein protein.
Length = 1043
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 788 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 829
>BA000025-4|BAB63295.1| 1001|Homo sapiens G9A protein.
Length = 1001
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 746 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 787
>AL844853-4|CAI41853.1| 1210|Homo sapiens HLA-B associated transcript
8 protein.
Length = 1210
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 955 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 996
>AL844853-3|CAI41852.1| 1176|Homo sapiens HLA-B associated transcript
8 protein.
Length = 1176
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 921 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 962
>AL671762-16|CAI18226.2| 1176|Homo sapiens euchromatic histone-lysine
N-methyltransferase 2 protein.
Length = 1176
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 921 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 962
>AL671762-15|CAI18224.2| 1210|Homo sapiens euchromatic histone-lysine
N-methyltransferase 2 protein.
Length = 1210
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 955 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 996
>AL671762-14|CAM25534.1| 1267|Homo sapiens euchromatic histone-lysine
N-methyltransferase 2 protein.
Length = 1267
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 1012 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 1053
>AL671762-13|CAM25533.1| 1233|Homo sapiens euchromatic histone-lysine
N-methyltransferase 2 protein.
Length = 1233
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 978 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 1019
>AL662834-27|CAI17748.1| 1210|Homo sapiens euchromatic histone-lysine
N-methyltransferase 2 protein.
Length = 1210
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 955 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 996
>AL662834-26|CAI17747.2| 1176|Homo sapiens euchromatic histone-lysine
N-methyltransferase 2 protein.
Length = 1176
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 921 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 962
>AL662834-25|CAM24993.1| 1267|Homo sapiens euchromatic histone-lysine
N-methyltransferase 2 protein.
Length = 1267
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 1012 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 1053
>AL662834-24|CAM24992.1| 1233|Homo sapiens euchromatic histone-lysine
N-methyltransferase 2 protein.
Length = 1233
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 978 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 1019
>AJ315532-1|CAC86666.1| 1210|Homo sapiens NG36/G9a protein.
Length = 1210
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 955 ENCETSTMNIDRNITHLQHCTCVDDCSSSNRLCGQLSIRCWY 996
>AF134726-3|AAD21812.1| 1001|Homo sapiens G9A protein.
Length = 1001
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 746 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 787
>AB209433-1|BAD92670.1| 1031|Homo sapiens HLA-B associated
transcript 8 BAT8 isoform a variant protein.
Length = 1031
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = -2
Query: 130 EICET-TIKTTKN-HHINHIT-----SHRNSFIGESAIRCWY 26
E CET T+ +N H+ H T S N G+ +IRCWY
Sbjct: 776 ENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWY 817
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,945,130
Number of Sequences: 237096
Number of extensions: 1417475
Number of successful extensions: 3965
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3965
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -