Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_J07
(439 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 165 6e-41
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 165 6e-41
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 165 6e-41
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 165 6e-41
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 69 5e-12
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 48 1e-05
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 41 0.002
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 41 0.002
BC122872-1|AAI22873.1| 143|Homo sapiens FLJ42957 protein protein. 31 1.3
BC121822-1|AAI21823.1| 143|Homo sapiens FLJ42957 protein protein. 31 1.3
AK124947-1|BAC86003.1| 143|Homo sapiens protein ( Homo sapiens ... 31 1.3
Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex late... 31 1.7
BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for IM... 31 1.7
BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex pr... 31 1.7
BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex pr... 31 1.7
BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein. 31 1.7
AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex pr... 31 1.7
AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex pr... 31 1.7
AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex p... 31 1.7
AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex pr... 31 1.7
AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein pr... 31 1.7
BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for IM... 30 4.0
AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein. 30 4.0
AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein. 30 4.0
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 165 bits (401), Expect = 6e-41
Identities = 78/95 (82%), Positives = 89/95 (93%), Gaps = 1/95 (1%)
Frame = +3
Query: 156 QLQEPILC*-QEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIK 332
+L EP+L +E+F+GVDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIK
Sbjct: 50 KLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIK 109
Query: 333 DILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 437
DIL+QYDR+LLVADPRRCE KKFGGPGARARYQKS
Sbjct: 110 DILIQYDRTLLVADPRRCESKKFGGPGARARYQKS 144
Score = 34.3 bits (75), Expect = 0.19
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 35 PIQAVQVFGRKKTALR-*HTQRDWSVV*MDAPSL--VEPRLLHTTTGTYPLLAGKVLWCG 205
P+Q+VQVFGRKKTA H +R ++ ++ L +EPR L LL GK + G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 165 bits (401), Expect = 6e-41
Identities = 78/95 (82%), Positives = 89/95 (93%), Gaps = 1/95 (1%)
Frame = +3
Query: 156 QLQEPILC*-QEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIK 332
+L EP+L +E+F+GVDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIK
Sbjct: 50 KLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIK 109
Query: 333 DILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 437
DIL+QYDR+LLVADPRRCE KKFGGPGARARYQKS
Sbjct: 110 DILIQYDRTLLVADPRRCESKKFGGPGARARYQKS 144
Score = 34.3 bits (75), Expect = 0.19
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 35 PIQAVQVFGRKKTALR-*HTQRDWSVV*MDAPSL--VEPRLLHTTTGTYPLLAGKVLWCG 205
P+Q+VQVFGRKKTA H +R ++ ++ L +EPR L LL GK + G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 165 bits (401), Expect = 6e-41
Identities = 78/95 (82%), Positives = 89/95 (93%), Gaps = 1/95 (1%)
Frame = +3
Query: 156 QLQEPILC*-QEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIK 332
+L EP+L +E+F+GVDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIK
Sbjct: 50 KLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIK 109
Query: 333 DILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 437
DIL+QYDR+LLVADPRRCE KKFGGPGARARYQKS
Sbjct: 110 DILIQYDRTLLVADPRRCESKKFGGPGARARYQKS 144
Score = 34.3 bits (75), Expect = 0.19
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 35 PIQAVQVFGRKKTALR-*HTQRDWSVV*MDAPSL--VEPRLLHTTTGTYPLLAGKVLWCG 205
P+Q+VQVFGRKKTA H +R ++ ++ L +EPR L LL GK + G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 165 bits (401), Expect = 6e-41
Identities = 78/95 (82%), Positives = 89/95 (93%), Gaps = 1/95 (1%)
Frame = +3
Query: 156 QLQEPILC*-QEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIK 332
+L EP+L +E+F+GVDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIK
Sbjct: 50 KLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIK 109
Query: 333 DILVQYDRSLLVADPRRCEPKKFGGPGARARYQKS 437
DIL+QYDR+LLVADPRRCE KKFGGPGARARYQKS
Sbjct: 110 DILIQYDRTLLVADPRRCESKKFGGPGARARYQKS 144
Score = 34.3 bits (75), Expect = 0.19
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 35 PIQAVQVFGRKKTALR-*HTQRDWSVV*MDAPSL--VEPRLLHTTTGTYPLLAGKVLWCG 205
P+Q+VQVFGRKKTA H +R ++ ++ L +EPR L LL GK + G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 69.3 bits (162), Expect = 5e-12
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = +3
Query: 159 LQEPILC*QEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDI 338
L+ +L +E+ +G+DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD
Sbjct: 63 LELGLLLDKEQLAGMDIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDT 121
Query: 339 LVQ 347
L +
Sbjct: 122 LTR 124
Score = 29.1 bits (62), Expect = 7.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 310 KHLRRRSKTF*FNTTEVCWSLTLVVASPRNSVVQAPVPDTRN 435
K++ S+ T CW T V +PRN PV TRN
Sbjct: 109 KYVDEASEEIKDTLTRPCWWFTPVAMNPRNLQALVPVLTTRN 150
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 48.0 bits (109), Expect = 1e-05
Identities = 23/39 (58%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = +3
Query: 156 QLQEPILC*-QEKFSGVDIRVTVKGGGHVAQVYAIRQAI 269
+L EP+L +E+F+GVDIRV VKGGGHVAQ+Y Q +
Sbjct: 50 KLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYGESQEL 88
Score = 34.3 bits (75), Expect = 0.19
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 35 PIQAVQVFGRKKTALR-*HTQRDWSVV*MDAPSL--VEPRLLHTTTGTYPLLAGKVLWCG 205
P+Q+VQVFGRKKTA H +R ++ ++ L +EPR L LL GK + G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 41.1 bits (92), Expect = 0.002
Identities = 30/75 (40%), Positives = 37/75 (49%)
Frame = +3
Query: 204 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 383
D+ TV GGG AQ AIR A++KAL +F + DE LL DPR
Sbjct: 327 DVTCTVSGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRV 376
Query: 384 CEPKKFGGPGARARY 428
E KK G GAR ++
Sbjct: 377 RERKKPGQEGARRKF 391
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 41.1 bits (92), Expect = 0.002
Identities = 30/75 (40%), Positives = 37/75 (49%)
Frame = +3
Query: 204 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 383
D+ TV GGG AQ AIR A++KAL +F + DE LL DPR
Sbjct: 233 DVTCTVSGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRV 282
Query: 384 CEPKKFGGPGARARY 428
E KK G GAR ++
Sbjct: 283 RERKKPGQEGARRKF 297
>BC122872-1|AAI22873.1| 143|Homo sapiens FLJ42957 protein protein.
Length = 143
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 120 SIYTTLQSRCVCYRSAVFLRPKTCTAWIGSR 28
S Y+T+ + CVC+ S V L + TAW+ SR
Sbjct: 4 SPYSTMITVCVCFNSRVQLTVPSFTAWLRSR 34
>BC121822-1|AAI21823.1| 143|Homo sapiens FLJ42957 protein protein.
Length = 143
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 120 SIYTTLQSRCVCYRSAVFLRPKTCTAWIGSR 28
S Y+T+ + CVC+ S V L + TAW+ SR
Sbjct: 4 SPYSTMITVCVCFNSRVQLTVPSFTAWLRSR 34
>AK124947-1|BAC86003.1| 143|Homo sapiens protein ( Homo sapiens
cDNA FLJ42957 fis, clone BRSTN2010500. ).
Length = 143
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 120 SIYTTLQSRCVCYRSAVFLRPKTCTAWIGSR 28
S Y+T+ + CVC+ S V L + TAW+ SR
Sbjct: 4 SPYSTMITVCVCFNSRVQLTVPSFTAWLRSR 34
>Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex lateral
element protein protein.
Length = 1530
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 243 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 374
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for
IMAGE:8860302) protein.
Length = 792
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 243 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 374
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 338 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 381
>BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 243 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 374
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 243 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 374
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein.
Length = 1024
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 243 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 374
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 243 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 374
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 243 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 374
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 243 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 374
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 243 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 374
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein
protein.
Length = 520
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 243 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 374
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 61 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 104
>BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for
IMAGE:6451327) protein.
Length = 204
Score = 29.9 bits (64), Expect = 4.0
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 312 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 395
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein.
Length = 689
Score = 29.9 bits (64), Expect = 4.0
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 312 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 395
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.0
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 312 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 395
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,961,465
Number of Sequences: 237096
Number of extensions: 1675393
Number of successful extensions: 3825
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3823
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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