Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0012_J07
         (439 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    26   0.21 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   3.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   3.4  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 272 RDGLSDCINLCNMSTTFYSHSNIHTRELFLLAKDRFL 162
           RD   +CI +CNM         IHT E  ++A  + L
Sbjct: 49  RDAYDNCITVCNMENV--DPLGIHTGESIVVAPSQTL 83


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 66  LRPKTCTAWIGSRLASCTAA 7
           L P  C +W+   +  CTA+
Sbjct: 106 LGPMLCDSWVSLDILLCTAS 125


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 246 PVQHVHHLLQSL*YPHQRTFP 184
           P  H HH  QSL + H R  P
Sbjct: 350 PHHHHHHQTQSLQHLHYRQPP 370


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,449
Number of Sequences: 438
Number of extensions: 2757
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)