Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_J06
(563 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 45 9e-06
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 32 0.067
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 32 0.067
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 31 0.12
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.36
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 29 0.47
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 29 0.47
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 29 0.47
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 28 0.82
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 28 0.82
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 1.1
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 1.4
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 27 1.4
SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces... 27 1.9
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 27 1.9
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 1.9
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 27 1.9
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 27 2.5
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 27 2.5
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 26 3.3
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 3.3
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 26 4.4
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 4.4
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 25 5.8
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 25 5.8
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 5.8
SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces ... 25 7.7
SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr 1|... 25 7.7
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 25 7.7
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 25 7.7
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 25 7.7
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 25 7.7
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 25 7.7
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 7.7
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 25 7.7
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 25 7.7
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 44.8 bits (101), Expect = 9e-06
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Frame = +1
Query: 157 KHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 336
K +DF+K I + A +NS + E LKE S + ++ EL+N L+ + + K
Sbjct: 455 KKIKDFEK-IEQDLRACLNSSSNE-----LKEKSALIDKKDQELNN-LREQIKEQK-KVS 506
Query: 337 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLA-----KEVGV 501
E Q + Q+L+R + + +K H E Q L +LQT I N+ S L+ KE V
Sbjct: 507 ESTQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEISNSEHLSSQLSTLAAEKEAAV 566
Query: 502 NHGSDLTET 528
++L+E+
Sbjct: 567 ATNNELSES 575
Score = 32.3 bits (70), Expect = 0.051
Identities = 38/133 (28%), Positives = 62/133 (46%)
Frame = +1
Query: 148 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 327
DLEK +D +K + ++ TE+++ +L+EG + ++++ELS+ L+ A
Sbjct: 1341 DLEKALKDSEKNFLRK-----EAEMTENIH-SLEEGKEETKKEIAELSSRLEDNQL-ATN 1393
Query: 328 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNH 507
K K L Q + R ED+ K + E +L E L Q KES L + + H
Sbjct: 1394 KLKNQLDHLNQEI-RLKEDVLK---EKESLIISLEESLSNQRQ---KESSLLDAKNELEH 1446
Query: 508 GSDLTETGAKTES 546
D +T K S
Sbjct: 1447 MLD--DTSRKNSS 1457
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 31.9 bits (69), Expect = 0.067
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Frame = +1
Query: 244 LKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA---RQNLERTVEDLRKAHPDVEK 414
+ + S++ V + E + L L+ K+ L++ +Q L EDLRK D EK
Sbjct: 1005 ITKDSETRVALLLEENKHLNNELSSHRNAEKQHLEKENDYKQQLLLVTEDLRKTREDYEK 1064
Query: 415 Q------ATALHEKLQTAIQNTLKESQNLAKEVGVNHG 510
+ A + +KL+ L++ ++L KE+ + G
Sbjct: 1065 ELLRHADARSTLQKLREDYTKALEQVEDLNKEIALKAG 1102
Score = 26.6 bits (56), Expect = 2.5
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 265 MVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQ 444
+VQ+ S L + L +D + K E L+ + R V+DL K + +Q T L+EK+Q
Sbjct: 194 LVQEKSALVSDLASLQSD-HSKVCEKLEVS----SRQVQDLEKKLAGLAQQNTELNEKIQ 248
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 31.9 bits (69), Expect = 0.067
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 18/135 (13%)
Frame = +1
Query: 109 AMVRRDAPNTILQDLEKHAQDFQKTI------SEQFNAIVNSKNTESLNKALKEGSDSMV 270
A+ +DA T L +L++ T QF A N+K E + +EG D+
Sbjct: 65 ALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQFEATENAKRKEEIEAQYREGYDTAQ 124
Query: 271 QQVSELSNSLQGA------------LTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEK 414
+QVS L L+ A A K ++ + + E+ V DL + DV
Sbjct: 125 KQVSSLVRFLRFASHNCVHPSDDAPFNSAVEKLLVIVYEGTEKSEKAVADLNDSSTDVVP 184
Query: 415 QATALHEKLQTAIQN 459
++ + + + + N
Sbjct: 185 ESEVSFQTISSRVDN 199
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 31.1 bits (67), Expect = 0.12
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Frame = +1
Query: 187 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD------ANGKAKEV-- 342
+EQF+ + + N + + G + + ++++ N +G + A K KE+
Sbjct: 189 NEQFSRALEALNDFVVPPLYEGGPSTRLSLITDVEN--EGLYREWQTSRYARNKQKEINI 246
Query: 343 LQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTAIQNTLKESQ---NLAKEVGVN 504
LQQ R NLER +D+ +E+ A EK + +QN +K S+ N A G+N
Sbjct: 247 LQQIRFNLERICQDIGNFDVRSRIERAARQAREKNEKLLQN-VKTSEIPINAADLEGIN 304
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.36
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +1
Query: 343 LQQARQNLERTVEDLRKAHPDVEK 414
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 29.1 bits (62), Expect = 0.47
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Frame = +3
Query: 204 NRQLKEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRG 383
N KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 673 NHHRKESIPSKQPTEGQ---HARQESLPSQQTTETKHLRKE----STPSKQPTEGQHTRQ 725
Query: 384 SPQGAPRRRETSHRITREAANRHP---EHTKGEPEPGEGSRRQPWIR 515
+ + ET H ++ P +H + E P + + +R
Sbjct: 726 ESLPSQQTTETKHLRKESIPSKQPTEGQHARQESLPSQQTTETKHLR 772
Score = 28.7 bits (61), Expect = 0.62
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +3
Query: 291 QQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EH 461
QQST RK S P+ P G H+R + + ET H ++ P +H
Sbjct: 667 QQSTVSNHHRKE----SIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQH 722
Query: 462 TKGEPEPGEGSRRQPWIR 515
T+ E P + + +R
Sbjct: 723 TRQESLPSQQTTETKHLR 740
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 29.1 bits (62), Expect = 0.47
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = +1
Query: 208 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 387
+N S++ L + D + S + NG A+E+ A + L VE+L
Sbjct: 29 LNLPTNSSISVTLSQ-DDLRTVTTASCSEKFENDTLWLNGNAEEIF--ANKRLRVCVEEL 85
Query: 388 RKAHPDVEKQATALHE----KLQTAIQNTLKESQNLA 486
RKA D+E++ L + KL +N + LA
Sbjct: 86 RKARLDLEEENDDLDKIGALKLHVVSENNFPTAAGLA 122
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 29.1 bits (62), Expect = 0.47
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +1
Query: 169 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 348
D K+ FN+I + E K L ++ + +Q+SE++ +A KA++ L+
Sbjct: 14 DSLKSKISNFNSIFDRFLQEERKKLLNNKNEYL-RQLSEIN--------EAQKKAEKSLE 64
Query: 349 QARQNLERTVEDLRKAHPD---VEKQATALHEKLQTAIQNTLKESQNL 483
Q + E L K H + E++ + EKL ++ K S+ L
Sbjct: 65 QTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEEL 112
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 28.3 bits (60), Expect = 0.82
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 364 LERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNHGSDL 519
L+ + LRK HP + + L +KL T QN++K V + SDL
Sbjct: 313 LKENSKRLRKLHPHITHKE--LMKKLSDEYHRTKDAKQNVSKSVSLISSSDL 362
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 28.3 bits (60), Expect = 0.82
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 169 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD-ANGKAKEVL 345
D T Q + I+ ++ +ES + A SM + S+S A NG+AKE
Sbjct: 426 DLNDTTKNQNDQILPNETSESDDDA--NSISSMENEEERTSDSKSSAKQGKGNGRAKETP 483
Query: 346 QQARQNLERTVED 384
++ R ++T ED
Sbjct: 484 EEKRARKKKTKED 496
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 1.1
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 217 KNTESLNKALKEGSDSMVQQVSELSNSLQGA------LTDANGKAKEVLQQARQNLERT 375
K T++ + +E +S + + E + L A L D+ KAK L+QAR LERT
Sbjct: 364 KETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERT 422
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 362 FWRACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSFS 243
F C S +L+LP +N P R+ D +C ++ ++P S
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCD---SCYSLRTKPKGS 235
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 127 APNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 303
A + +++ HA+ + T + V +TES N+A+K+ D+ ++ +SE LQ
Sbjct: 159 ATDICVKETALHARHWYNTYI--ISEAVKGSSTESHNQAIKDFRDAKIEVISEKDPILQ 215
>SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 172
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +1
Query: 346 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQ 477
++AR+NL+ V + + P+++ + + +L+ I+++L Q
Sbjct: 85 RKARENLKVNVSSIGEVLPEIDLDISVANSRLKPVIKDSLSSKQ 128
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +1
Query: 64 AKCFVLFACVALAHGAMVRRD-----APNTILQDLEKHAQD 171
A+ ++L A + H + RD APNTIL+DL +H +D
Sbjct: 201 ARNWLLSAAIQPYHSWVYWRDVDVETAPNTILEDLMRHDKD 241
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.1 bits (57), Expect = 1.9
Identities = 19/91 (20%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +1
Query: 223 TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQN----LERTVEDLR 390
TE+ + L + + ++ +++++L N+ Q + + K + + LE+T+EDL+
Sbjct: 875 TETKHDILAQRNRNVSEKMNDLENAAQKFFSSPDRKNGYLYPSEHTSKIEYLEKTIEDLK 934
Query: 391 KAHPDVEKQATALHEKLQTAIQNTLKESQNL 483
A D K L + + + + T K + +
Sbjct: 935 LALQDELKNRNLLMDDISSYNKQTTKLQEKI 965
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 27.1 bits (57), Expect = 1.9
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Frame = +1
Query: 109 AMVRRDAPNTILQDLEKHAQDFQKTISEQFNA--IVNSKNTESLNKALKEGSDSMVQQVS 282
+M R A + +K + D T S+Q +V S N +LNK +E SDS+ Q S
Sbjct: 75 SMSRTSASSFRYSSPQKSSIDTPITSSDQGLTPDLVGSSN--ALNKPTRE-SDSLKHQKS 131
Query: 283 E-LSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK----LQT 447
+ NSL +L+ ++ +R NL+ + A D + A L L++
Sbjct: 132 HPMLNSLGSSLSLKKSVSRPPSSMSRTNLDVSSRWDNTADNDSQIDAQDLSRSTPSPLRS 191
Query: 448 AIQNTLKESQNLAKE 492
A++N L+ + K+
Sbjct: 192 AMENVLQSLNAMGKK 206
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 2.5
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 184 ISEQFN-AIVNSKNTESLNKALKEGSDSMVQQVSELSNS--LQGALTDANGKAKEVLQQA 354
I +Q N +I N KNT N + K + + +S +SNS A+ + +AKE + A
Sbjct: 483 IPQQSNKSIGNHKNTSVANVSSKVANSKFERNISMMSNSNASSPAIFEVGAEAKEKTKDA 542
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 367 ERTVEDLRK-AHPDVEKQATALHEKLQTAIQNTLKES 474
ERT E + A D+EKQ + H++ Q+++ + L+ES
Sbjct: 3 ERTSESSSESASFDLEKQQSNHHDRYQSSVSSELEES 39
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 26.2 bits (55), Expect = 3.3
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Frame = +1
Query: 142 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT-- 315
L+DLE+H D K I I ++ ++ K +E D +++ + +S++ +T
Sbjct: 85 LEDLERHVDDCNKRID-----IAEARREKT--KEEEERIDELMRDIIHTDHSIEVIITEM 137
Query: 316 DANGKAKEVLQQARQNLE-RTVEDLRK-------AHPDVEKQATALHEKLQ 444
+A K K V + +E ++ RK + ++ QA+ H+KLQ
Sbjct: 138 EALAKRKLVNDAVKHFIELNRLKTYRKELYDEVISMNEIPSQASTTHQKLQ 188
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.2 bits (55), Expect = 3.3
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 226 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 405
ES N+ DSM ++ ELSN L+ AN K E R+ + DLR+
Sbjct: 824 ESSNQEYTATVDSMNSRILELSNDLR----VANSKLSECSDDVRRLTLQNSFDLREHQTL 879
Query: 406 V-EKQATALHEKLQTAIQNTLK 468
V + Q+ K +Q T++
Sbjct: 880 VLQLQSNITELKQDITLQRTVR 901
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.8 bits (54), Expect = 4.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 322 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTA 450
N +K L+ AR +L+ ++ED KA+ + E+ LQT+
Sbjct: 33 NQLSKLKLEDARADLQSSMEDSNKANGNGEETTDGAEGVLQTS 75
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 4.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 310 LTDANGKAKEVLQQARQN 363
LTD AKE+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 5.8
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +1
Query: 232 LNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE 411
L K E SD ++ ++ LS+ L L DAN L+ L+ ++ L A P+V+
Sbjct: 6 LLKKYVESSDKDIRYMA-LSD-LAARLNDANHLKNLKLESFPDTLDVLLQALSDASPEVQ 63
Query: 412 KQATALHEKLQTAI-QNTLKES-QNLAKEV 495
++A + + I Q+ LK + +NL V
Sbjct: 64 QEAVRCVAIISSKIPQDKLKSTVENLLSGV 93
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 25.4 bits (53), Expect = 5.8
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +3
Query: 402 RRRETSHRITREAANRHPEHTKGEPEPGEGSRRQPWIRPHRNWRQN 539
R ++ H+I + KG P G GSR++ R W N
Sbjct: 219 RTEDSDHQIPQRGGTLEAPR-KGGPRSGVGSRKRKRATVSRKWSTN 263
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 25.4 bits (53), Expect = 5.8
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 133 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 300
NT+ + + K +Q FQ S +FN + N ++K+L++ + S+ N L
Sbjct: 487 NTVDEAITKQSQTFQLVNSNEFNEV----NANDVHKSLRQNCAKLDFDDSKSKNLL 538
>SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 441
Score = 25.0 bits (52), Expect = 7.7
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -1
Query: 140 IVLGASR-RTIAP*ARATQANNTKHLA 63
+ LG SR TI+P RA Q++ ++HLA
Sbjct: 214 LALGLSRVYTISPAFRAEQSHTSRHLA 240
>SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.0 bits (52), Expect = 7.7
Identities = 22/128 (17%), Positives = 57/128 (44%)
Frame = +1
Query: 133 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGAL 312
N++++ + + Q+ + + + N+ NS+ S++ A +GS + + ++ +++ G+
Sbjct: 131 NSVVEKISQKNQEARSRANSRVNSRANSRANSSVSLAGMDGSPNWKR---KMKSAVFGSR 187
Query: 313 TDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKE 492
N E Q R ++ + + P K + +L Q +I ++Q +
Sbjct: 188 VKLN---DEEAQLPRNKSSVSIAEQAASRP---KVSFSLQSSRQPSIAEEQPQTQRKSSA 241
Query: 493 VGVNHGSD 516
+ V H +
Sbjct: 242 ITVEHAEN 249
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 7.7
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = +1
Query: 136 TILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT 315
TIL L + Q F+K I+ SKN +S +L + D + + +L +
Sbjct: 343 TILSSLSRSCQKFRKKIAFTLFVGKQSKNDDSDFSSLCQRLDEISASCNNDYTTLLYQIR 402
Query: 316 DANGKAKEVLQQARQNLERTVEDLRK 393
E + + LE +E LRK
Sbjct: 403 TFGYAVDEKHFKTNERLECLLEKLRK 428
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 7.7
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -1
Query: 383 SSTVRSKFWRACWSTSLALPFASVNAPCRLLDNSETCCTME--SEPSFSALF 234
++T+ + + W + +LP A C +D++ +C + S +S LF
Sbjct: 340 TATMSCQATNSAWMAATSLPPTPSEAVCECMDSTRSCVINDDVSSDDYSDLF 391
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 25.0 bits (52), Expect = 7.7
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Frame = +1
Query: 328 KAKEVLQ---QARQNLERTVEDLRK---AHPD-VEKQATALHEKLQTAIQNTLKESQNLA 486
K KE ++ Q ++ LER VE+LRK + D VE +A + + + E Q L
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLY 187
Query: 487 KEVGVNHGSDLTETGAK 537
K++ + S + + +K
Sbjct: 188 KDMEQENASTIQKLTSK 204
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 7.7
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +1
Query: 94 ALAHGAM-VRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDS 264
+L GA V ++ I K DF K I FN + L A+ E S +
Sbjct: 46 SLTDGAKSVAKERQKKISDPARKFFSDFSKLIDNSFNVFAKKNEGDLLQNAIYELSQA 103
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 25.0 bits (52), Expect = 7.7
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 238 KALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP 402
+ ++E S++ + SE+S + A+TD + KE+ A ++ + +KA P
Sbjct: 30 REIEESLPSILGEKSEVSKPFKPAVTDPSNAKKEI-NMAIESPSKKATSPKKATP 83
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.0 bits (52), Expect = 7.7
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 178 KTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNS 297
KT+S++ + S+ T SLNKA K+ + + ++ +S S
Sbjct: 164 KTLSKRLLDLALSEKTHSLNKASKKSNKNGDKKRKHVSKS 203
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 25.0 bits (52), Expect = 7.7
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Frame = +1
Query: 268 VQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLR--KAHPDVEKQATA---LH 432
V ++ N+ Q AL A + + ++QNL ++ D+R + P + +A
Sbjct: 202 VDEIVVPQNNFQSALEHAVPVSLDTQNLSQQNLSKSNSDVRLSTSSPSITVDFSADKETD 261
Query: 433 EKLQTAIQNTLKESQNLAKEVGVNH--GSDLTETGAK 537
EK + +K +QN+ E +T GAK
Sbjct: 262 EKRERNCDKQVKAAQNILPEWHATSTISGSITRAGAK 298
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 365 WSAQSRISARRTPTSRNKPPHYTRSCKPP 451
+ QSR S S N PP+ TR+ P
Sbjct: 103 FEVQSRYSGALKEVSSNTPPNMTRAASQP 131
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.125 0.334
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,082,114
Number of Sequences: 5004
Number of extensions: 38487
Number of successful extensions: 179
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 238029836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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