Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0012_I22
(631 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6 |Schizosaccharom... 260 1e-70
SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 182 3e-47
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 182 4e-47
SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyce... 174 8e-45
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 157 9e-40
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 153 2e-38
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 31 0.18
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 3.0
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 26 3.9
SPAC22E12.01 ||SPAC890.09|triose phosphate transporter |Schizosa... 26 3.9
SPBP8B7.08c |||leucine carboxyl methyltransferase |Schizosacchar... 26 3.9
SPBP4H10.10 |||rhomboid family protease|Schizosaccharomyces pomb... 26 3.9
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 5.2
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 25 6.8
SPBC17D1.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 6.8
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 25 6.8
SPBC1861.05 |||carbohydrate kinase|Schizosaccharomyces pombe|chr... 25 6.8
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 25 9.0
>SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 892
Score = 260 bits (637), Expect = 1e-70
Identities = 129/209 (61%), Positives = 161/209 (77%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
+ SSAAGLTAAVVKDEE+ DF IEAGALMLADNG+C IDEFDKMD +DQVAIHEAMEQQT
Sbjct: 502 KASSAAGLTAAVVKDEETGDFTIEAGALMLADNGICAIDEFDKMDLSDQVAIHEAMEQQT 561
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
IS+AKAG++ATLNARTSILAAANPIGGRY+R +L+ N+ +SAPIMSRFDLFF+++DE +
Sbjct: 562 ISIAKAGIQATLNARTSILAAANPIGGRYNRKTTLRNNINMSAPIMSRFDLFFVVLDECN 621
Query: 364 EMVDYAIARKIVDLHCNKEETYDCVYSREDLLRYIAFARSFKPIITEEAGKLLVEYYTVV 543
E VD +A+ IVD+H +++ +S E L RYI +AR+FKP + E+ +V+ Y +
Sbjct: 622 ESVDRHLAKHIVDIHRLRDDAMQPEFSTEQLQRYIRYARTFKPKLNTESCAEIVKKYKQL 681
Query: 544 XXXXXXXXXXXXXXITVRQLESMVRLAEA 630
ITVRQLESM+RL+EA
Sbjct: 682 RMDDAQGAGKNSYRITVRQLESMIRLSEA 710
>SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit
Cdc21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 182 bits (444), Expect = 3e-47
Identities = 96/214 (44%), Positives = 137/214 (64%), Gaps = 5/214 (2%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
+GSSA GLTA + +D+++ V+E+GAL+L+D G+CCIDEFDKM + +HE MEQQT
Sbjct: 571 KGSSAVGLTAYITRDQDTKQLVLESGALVLSDGGICCIDEFDKMSDATRSILHEVMEQQT 630
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
+++AKAG+ TLNARTSILA+ANPIG +Y+ + +N+ L ++SRFDL ++++D
Sbjct: 631 VTVAKAGIITTLNARTSILASANPIGSKYNPDLPVTKNIDLPPTLLSRFDLVYLILDRVD 690
Query: 364 EMVDYAIARKIVDLHC--NKEETYDC-VYSREDLLRYIAFAR-SFKPIITEEAGKLLVEY 531
E +D +A IV ++ E D V+S E L YI +AR + P+I+EEA K LV
Sbjct: 691 ETLDRKLANHIVSMYMEDTPEHATDMEVFSVEFLTSYITYARNNINPVISEEAAKELVNA 750
Query: 532 YT-VVXXXXXXXXXXXXXXITVRQLESMVRLAEA 630
Y + T RQLESM+RL+EA
Sbjct: 751 YVGMRKLGEDVRASEKRITATTRQLESMIRLSEA 784
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 182 bits (443), Expect = 4e-47
Identities = 99/218 (45%), Positives = 137/218 (62%), Gaps = 9/218 (4%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
+GSSAAGLTA++ +D + +F +E GA++LAD G+ CIDEFDKM D+VAIHEAMEQQT
Sbjct: 398 KGSSAAGLTASIQRDSVTREFYLEGGAMVLADGGIVCIDEFDKMRDEDRVAIHEAMEQQT 457
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
IS+AKAG+ LN+RTS+LAAANPI GRYD K+ +N+ + I+SRFD+ FI+ DE
Sbjct: 458 ISIAKAGITTILNSRTSVLAAANPIFGRYDDMKTPGENIDFQSTILSRFDMIFIVKDEHD 517
Query: 364 EMVDYAIARKIVDLHCNKEETYDCVYSRE----DLLRYIAFAR-SFKPIITEEAGKLLVE 528
E D IAR +++LH N +E+ + + E RYI + R P + EA + L
Sbjct: 518 ETKDRNIARHVINLHTNLQESSETLAIGEIPFDKFRRYINYCRHKCAPNLDAEAAEKLSS 577
Query: 529 YYTV----VXXXXXXXXXXXXXXITVRQLESMVRLAEA 630
+ V ITVRQLE+++R+ E+
Sbjct: 578 QFVAIRKRVHQSEQDSNSRSTIPITVRQLEAIIRITES 615
>SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 760
Score = 174 bits (424), Expect = 8e-45
Identities = 84/170 (49%), Positives = 122/170 (71%), Gaps = 2/170 (1%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
RGSS GLTAAV++D + + V+E GAL+LADNG+CCIDEFDKMD +D+ AIHE MEQQT
Sbjct: 429 RGSSGVGLTAAVMRDPVTDEMVLEGGALVLADNGICCIDEFDKMDESDRTAIHEVMEQQT 488
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
IS++KAG+ TLNARTSILAAANP+ GRY+ + N+ L A ++SRFD+ F+++D S
Sbjct: 489 ISISKAGITTTLNARTSILAAANPLYGRYNPKVAPIHNINLPAALLSRFDILFLILDTPS 548
Query: 364 EMVDYAIARKIVDLHC-NKEETYDCVYSREDLLR-YIAFARSFKPIITEE 507
D +A+ + +H N++ D +++R YI+ AR ++P++ ++
Sbjct: 549 RETDEHLAQHVTYVHMHNEQPKMDFEPLDPNMIRHYISSARQYRPVVPKD 598
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 157 bits (382), Expect = 9e-40
Identities = 74/135 (54%), Positives = 100/135 (74%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
RGSS GLTAAV D+E+ + +EAGA++LAD GV CIDEFDKM D+VAIHE MEQQT
Sbjct: 382 RGSSGVGLTAAVTTDKETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRVAIHEVMEQQT 441
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
+++AKAG+ +LNAR S++AAANPI G+YD K QN+AL ++SRFDL FI+ D+
Sbjct: 442 VTIAKAGIHTSLNARCSVIAAANPIYGQYDIRKDPHQNIALPDSMLSRFDLLFIVTDDID 501
Query: 364 EMVDYAIARKIVDLH 408
+ D A++ ++ +H
Sbjct: 502 DKKDRALSEHVLRMH 516
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 153 bits (371), Expect = 2e-38
Identities = 95/227 (41%), Positives = 132/227 (58%), Gaps = 18/227 (7%)
Frame = +1
Query: 4 RGSSAAGLTAAVVKDEESFDFVIEAGALMLADNGVCCIDEFDKMDPTDQVAIHEAMEQQT 183
+G+SA GLTA+V KD + ++ +E GAL+LAD GVC IDEFDKM+ D+ +IHEAMEQQ+
Sbjct: 560 QGASAVGLTASVRKDPITNEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQS 619
Query: 184 ISLAKAGVRATLNARTSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESS 363
IS++KAG+ TL AR +I+AAANPIGGRY+ QNV L+ PI+SRFD+ ++ D +
Sbjct: 620 ISISKAGIVTTLQARCTIIAAANPIGGRYNTTIPFNQNVELTEPILSRFDILQVVKDTVN 679
Query: 364 EMVDYAIARKIVDLHCNKEETYD---CVYSR-------------EDLLR-YIAFAR-SFK 489
+D +A +V H +D V + +DLLR YI FAR
Sbjct: 680 PEIDEQLANFVVSSHIRSHPAFDPNMDVLKKVPTETGIDAKPIPQDLLRKYIHFAREKVF 739
Query: 490 PIITEEAGKLLVEYYTVVXXXXXXXXXXXXXXITVRQLESMVRLAEA 630
P + + + + Y+ ITVR LES +RL+EA
Sbjct: 740 PRLQQMDEEKISRLYS---DMRRESLATGSYPITVRHLESAIRLSEA 783
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 30.7 bits (66), Expect = 0.18
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 602 NWRTVIRHEPPAEPDPSRPRTTV*YSTNNL 513
NW T++ +PP P P P TV + + L
Sbjct: 962 NWDTILEEDPPFVPKPFSPEDTVYFDSRGL 991
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 3.0
Identities = 41/207 (19%), Positives = 80/207 (38%), Gaps = 2/207 (0%)
Frame = -3
Query: 629 ASASLTIDSNWRTVIRHEPPAEPDPSRPRTTV*YSTNNLPASSVIIGLNDLANAI*RNRS 450
AS+SLT S+ + + + S T+ ++++L +SS ++ + +
Sbjct: 81 ASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLA 140
Query: 449 SLEYTQS*VSSLLQCRXXXXXXXXXXXXXXXXXXSMKNKSKRDMMGALRATFCCRDFALS 270
S T S ++S S + S + AT A S
Sbjct: 141 SSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSAT--SSSLASS 198
Query: 269 YLPPIGFAAARIEVLAFNVALTPAFANDMVCCSMASCMATWSVGSILSNSSIQHTPLSAN 90
L A A L+ A A ++ + S+ S + + S +S++ TPL+++
Sbjct: 199 SLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSS 258
Query: 89 IRAPASITKSKDSSS--LTTAAVRPAA 15
A+ + S SSS T+++ P++
Sbjct: 259 NSTTAATSASATSSSAQYNTSSLLPSS 285
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 26.2 bits (55), Expect = 3.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 123 VRQNGSHRPSRHTRSHGTTDHIVG 194
+RQ HR S +R G+T HI G
Sbjct: 67 IRQPSQHRSSLFSRMLGSTSHIFG 90
>SPAC22E12.01 ||SPAC890.09|triose phosphate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 26.2 bits (55), Expect = 3.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 267 IRQGEVPAAERRPQRPHHVTFRLIL 341
I QG P ++ P RP H R+++
Sbjct: 28 IEQGVAPVSQNEPDRPQHWITRVVI 52
>SPBP8B7.08c |||leucine carboxyl methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 310
Score = 26.2 bits (55), Expect = 3.9
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = +1
Query: 229 TSILAAANPIGGRYDRAKSLQQNVALSAPIMSRFDLFFILIDESSEMVDYAIARKIVDLH 408
TS + PI G + K ++ N++ I+ D + + +DY + I +
Sbjct: 193 TSGIVVYEPIQGMDNFGKMMKANLSARGVILKTLDCYETTEQQRMRFLDYGYSEVIAEDF 252
Query: 409 CNKEETY 429
EET+
Sbjct: 253 LTIEETW 259
>SPBP4H10.10 |||rhomboid family protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 392
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 205 HLPLPTIWSVVPWLRVW 155
HLPL ++S VP L VW
Sbjct: 66 HLPLKNVYSQVPLLPVW 82
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -3
Query: 131 LSNSSIQHTPLSANIRAPASITKSKDSSSLTTAAVRPA 18
+S+SS T SA+ +P+SI+ S SSS ++ P+
Sbjct: 594 ISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPS 631
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 6.8
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 GADTTGRSPCSRTSPSAPPSCHVSTYSSY**TRAARWST 376
G T RS S S P S H S Y+SY + ++WS+
Sbjct: 79 GLSTRTRSQYKPNSTSNP-SKHTSAYASYNKGKNSKWSS 116
>SPBC17D1.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 368
Score = 25.4 bits (53), Expect = 6.8
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -3
Query: 227 LAFNVALTPAFANDMVCCSMASCMATWSVGSILSNS-SIQHTPLSANIRAPASITKSKDS 51
L N + P N S+ + +T ++ L+ S S+ H P S +++ S T + S
Sbjct: 48 LVKNGMIAPRRKNSFAS-SVNNPFSTSALSEALNGSVSMSHVPSSGLLKSTLSSTPTAGS 106
Query: 50 SSLTTAAVRPAA 15
+ L T+ PA+
Sbjct: 107 NLLGTSPAEPAS 118
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 371 STTL*RGRSSICIVTKRRLTIVYILEKICYVISRSRGHSNLLLRR 505
++ L R +++C + L + +L++IC V+ HSN LL R
Sbjct: 201 ASALRRAINNLCGPDEGVLYFLEVLKQICSVVYVDSYHSNRLLSR 245
>SPBC1861.05 |||carbohydrate kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 747
Score = 25.4 bits (53), Expect = 6.8
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -3
Query: 227 LAFNVALTPAF---ANDMVCCSMASCMATWSVGSILSNSSIQHTPLSANIRAPASITKSK 57
+A N+AL + + +V C + T S+ L+ SS+QHT + + S T
Sbjct: 431 VAHNMALASSLMGASTKLVSCVGTKSVPTSSIKEYLTKSSLQHTIVEKSNFTSCSYTAIN 490
Query: 56 D 54
D
Sbjct: 491 D 491
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -3
Query: 602 NWRTVIRHEPPAEPDPSRPRTTV*YSTNNLPAS 504
NW + HE P P P P T + + A+
Sbjct: 936 NWDDIFSHEAPFIPAPETPLDTAYFDSRGAGAA 968
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,529,561
Number of Sequences: 5004
Number of extensions: 52240
Number of successful extensions: 181
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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